IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2424	 74.19	0	2833123..2833800	-	225	153005303	-	Anae109_2443	-	radical SAM domain-containing protein
2425	 73.14	0	2833924..2834232	-	102	153005304	-	Anae109_2444	-	TraR/DksA family transcriptional regulator
2426	 74.92	0	2834386..2835039	-	217	153005305	-	Anae109_2445	-	nicotinamidase
2427	 73.08	0	2835196..2836800	+	534	153005306	-	Anae109_2446	-	metal dependent phosphohydrolase
2428	 71.21	0	2836824..2837549	+	241	153005307	-	Anae109_2447	-	HAD family hydrolase
2429	 73.97	0	2837566..2838345	-	259	153005308	-	Anae109_2448	-	TatD family hydrolase
2430	 71.70	0	2838646..2840730	-	694	153005309	-	Anae109_2449	-	methionyl-tRNA synthetase
2431	 76.11	0	2840727..2842103	-	458	153005310	-	Anae109_2450	-	DNA polymerase III delta
2432	 77.97	+1	2842090..2843133	-	347	153005311	-	Anae109_2451	-	DNA polymerase III, delta prime subunit
2433	 77.39	+1	2843293..2844672	-	459	153005312	-	Anae109_2452	-	histidine kinase
2434	 67.93	-1	2844757..2845311	+	184	153005313	-	Anae109_2453	-	DivIVA family protein
2435	 75.37	0	2845338..2846015	-	225	153005314	-	Anae109_2454	-	carbonic anhydrase
2436	 74.19	0	2846143..2848842	-	899	153005315	-	Anae109_2455	-	DNA polymerase I
2437	 75.74	0	2848976..2849581	-	201	153005316	-	Anae109_2456	-	FHA domain-containing protein
2438	 74.91	0	2849631..2852153	-	840	153005317	-	Anae109_2457	-	hypothetical protein
2439	 74.69	0	2852153..2853436	-	427	153005318	-	Anae109_2458	-	hypothetical protein
2440	 73.54	0	2853520..2855613	-	697	153005319	-	Anae109_2459	-	glycyl-tRNA synthetase, beta subunit
2441	 69.32	-1	2855650..2856630	-	326	153005320	-	Anae109_2460	-	glycyl-tRNA synthetase subunit alpha
2442	 77.29	+1	2856715..2857665	-	316	153005321	-	Anae109_2461	-	ribokinase-like domain-containing protein
2443	 79.38	+1	2857670..2858440	-	256	153005322	-	Anae109_2462	-	DNA repair protein RecO
2444	 79.95	+1	2858496..2858924	-	142	153005323	-	Anae109_2463	-	hypothetical protein
2445	 76.28	0	2858928..2859686	-	252	153005324	-	Anae109_2464	-	TPR repeat-containing protein
2446	 72.67	0	2859686..2860168	-	160	153005325	-	Anae109_2465	-	hypothetical protein
2447	 74.06	0	2860181..2860789	-	202	153005326	-	Anae109_2466	-	hypothetical protein
2448	 73.14	0	2860888..2861520	-	210	153005327	-	Anae109_2467	-	radical SAM domain-containing protein
2449	 78.44	+1	2861553..2862257	-	234	153005328	-	Anae109_2468	-	lytic transglycosylase catalytic
2450	 73.58	0	2862254..2862571	-	105	153005329	-	Anae109_2469	-	hypothetical protein
2451	 71.65	0	2862574..2863035	-	153	153005330	-	Anae109_2470	-	hypothetical protein
2452	 75.27	0	2863226..2864317	-	363	153005331	-	Anae109_2471	-	dihydroorotate oxidase
2453	 72.71	0	2864448..2864927	-	159	153005332	-	Anae109_2472	-	ribosomal-protein-alanine acetyltransferase
2454	 78.38	+1	2864930..2865595	-	221	153005333	-	Anae109_2473	-	hypothetical protein
2455	 73.21	0	2865685..2866647	+	320	153005334	-	Anae109_2474	-	chaperone DnaJ domain-containing protein
2456	 73.07	0	2866672..2867421	+	249	153005335	-	Anae109_2475	-	hypothetical protein
2457	 74.10	0	2867451..2870060	+	869	153005336	-	Anae109_2476	-	glycerol-3-phosphate O-acyltransferase
2458	 66.73	-1	2870192..2871724	+	510	153005337	-	Anae109_2477	-	Acetyl-CoA hydrolase
2459	 77.90	+1	2871823..2872614	+	263	153005338	-	Anae109_2478	-	inositol monophosphatase
2460	 77.68	+1	2872514..2873203	-	229	153005339	-	Anae109_2479	-	GCN5-related N-acetyltransferase
2461	 78.38	+1	2873258..2874760	-	500	153005340	-	Anae109_2480	-	ATPase central domain-containing protein
2462	 72.44	0	2874757..2876592	-	611	153005341	-	Anae109_2481	-	type II secretion system protein E
2463	 74.24	0	2876696..2876893	-	65	153005342	-	Anae109_2482	-	FmdB family regulatory protein
2464	 71.77	0	2877308..2878189	+	293	153005343	-	Anae109_2483	-	hypothetical protein
2465	 74.19	0	2878259..2878750	-	163	153005344	-	Anae109_2484	-	hypothetical protein
2466	 67.59	-1	2878827..2879474	-	215	153005345	-	Anae109_2485	-	inorganic diphosphatase
2467	 71.34	0	2879517..2880458	-	313	153005346	-	Anae109_2486	-	Serine O-acetyltransferase
2468	 69.68	0	2880455..2881384	-	309	153005347	-	Anae109_2487	-	cysteine synthase A
2469	 73.22	0	2881472..2883622	-	716	153005348	-	Anae109_2488	-	excinuclease ABC, C subunit
2470	 75.38	0	2883734..2884399	-	221	153005349	-	Anae109_2489	-	hypothetical protein
2471	 71.32	0	2884547..2885578	-	343	153005350	-	Anae109_2490	-	cytochrome c class I
2472	 73.63	0	2885829..2887709	+	626	153005351	-	Anae109_2491	-	histidine kinase
2473	 74.03	0	2887709..2889067	+	452	153005352	-	Anae109_2492	-	two component, sigma54 specific, Fis family transcriptional regulator
2474	 70.41	0	2889080..2891269	-	729	153005353	-	Anae109_2493	-	excinuclease ABC subunit B
2475	 66.67	-1	2891368..2891571	+	67	153005354	-	Anae109_2494	-	cold-shock DNA-binding domain-containing protein
2476	 72.04	0	2891656..2891841	+	61	153005355	-	Anae109_2495	-	hypothetical protein
2477	 71.91	0	2891884..2893332	-	482	153005356	-	Anae109_2496	-	cysteinyl-tRNA synthetase
2478	 78.04	+1	2893344..2894504	-	386	153005357	-	Anae109_2497	-	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
2479	 61.63	-2	2894687..2895202	-	171	153005358	-	Anae109_2498	-	CarD family transcriptional regulator
2480	 79.72	+1	2895364..2897715	+	783	153005359	-	Anae109_2499	-	DNA internalization-related competence protein ComEC/Rec2
2481	 67.42	-1	2897718..2897981	+	87	153005360	-	Anae109_2500	-	hypothetical protein
2482	 78.50	+1	2897996..2898916	+	306	153005361	-	Anae109_2501	-	FHA domain-containing protein
2483	 71.67	0	2899085..2899504	-	139	153005362	-	Anae109_2502	-	hypothetical protein
2484	 78.13	+1	2899684..2900913	-	409	153005363	-	Anae109_2503	-	TPR repeat-containing protein
2485	 71.30	0	2900989..2902284	-	431	153005364	-	Anae109_2504	-	adenylosuccinate synthetase
2486	 79.17	+1	2902377..2903408	-	343	153005365	-	Anae109_2505	-	histidine--tRNA ligase
2487	 73.72	0	2903515..2905101	-	528	153005366	-	Anae109_2506	-	D-3-phosphoglycerate dehydrogenase
2488	 71.07	0	2905320..2905955	-	211	153005367	-	Anae109_2507	-	TetR family transcriptional regulator
2489	 75.39	0	2906036..2908465	-	809	153005368	-	Anae109_2508	-	organic solvent tolerance protein OstA-like protein
2490	 75.89	0	2908505..2910055	-	516	153005369	-	Anae109_2509	-	hypothetical protein
2491	 77.56	+1	2910146..2911357	-	403	153005370	-	Anae109_2510	-	FolC bifunctional protein
2492	 69.46	-1	2911484..2912341	-	285	153005371	-	Anae109_2511	-	acetyl-CoA carboxylase, carboxyl transferase, beta subunit
2493	 73.24	0	2912698..2913732	+	344	153005372	-	Anae109_2512	-	phosphoribosylformylglycinamidine cyclo-ligase
2494	 76.19	0	2913729..2914421	+	230	153005373	-	Anae109_2513	-	phosphoribosylglycinamide formyltransferase
2495	 75.65	0	2914575..2916122	+	515	153005374	-	Anae109_2514	-	phytoene dehydrogenase
2496	 70.27	0	2916224..2916445	+	73	153005375	-	Anae109_2515	-	ribosomal protein L28
2497	 76.13	0	2916607..2917917	+	436	153005376	-	Anae109_2516	-	hypothetical protein
2498	 70.27	0	2917942..2918940	-	332	153005377	-	Anae109_2517	-	adenosine deaminase
2499	 76.31	0	2918976..2919452	-	158	153005378	-	Anae109_2518	-	hypothetical protein
2500	 78.21	+1	2919595..2919906	+	103	153005379	-	Anae109_2519	-	hypothetical protein
2501	 72.81	0	2919903..2920748	+	281	153005380	-	Anae109_2520	-	methylenetetrahydrofolate dehydrogenase (NADP(+))
2502	 76.83	0	2920745..2921875	+	376	153005381	-	Anae109_2521	-	metallophosphoesterase
2503	 73.50	0	2922085..2923167	+	360	153005382	-	Anae109_2522	-	glycine cleavage system aminomethyltransferase T
2504	 66.41	-1	2923184..2923567	+	127	153005383	-	Anae109_2523	-	glycine cleavage system H protein
2505	 73.69	0	2923655..2924992	+	445	153005384	-	Anae109_2524	-	glycine dehydrogenase subunit 1
2506	 72.02	0	2924995..2926563	+	522	153005385	-	Anae109_2525	-	glycine dehydrogenase subunit 2
2507	 68.94	-1	2926666..2927148	-	160	153005386	-	Anae109_2526	-	methylglyoxal synthase
2508	 80.05	+1	2927240..2928412	-	390	153005387	-	Anae109_2527	-	TonB family protein
2509	 75.30	0	2928524..2929705	-	393	153005388	-	Anae109_2528	-	TonB family protein
2510	 77.12	+1	2929817..2931730	+	637	153005389	-	Anae109_2529	-	glycosyl transferase family protein
2511	 76.19	0	2931750..2932883	-	377	153005390	-	Anae109_2530	-	hypothetical protein
2512	 64.86	-2	2932912..2933133	-	73	153005391	-	Anae109_2531	-	translation initiation factor IF-1
2513	 65.15	-2	2933230..2933427	-	65	153005392	-	Anae109_2532	-	cold-shock DNA-binding domain-containing protein
2514	 75.48	0	2933602..2934021	-	139	153005393	-	Anae109_2533	-	TPR repeat-containing protein
2515	 70.52	0	2934031..2934939	-	302	153005394	-	Anae109_2534	-	hypothetical protein
2516	 76.09	0	2935125..2935538	+	137	153005395	-	Anae109_2535	-	Holliday junction resolvase YqgF
2517	 74.04	0	2935556..2936572	+	338	153005396	-	Anae109_2536	-	aminodeoxychorismate lyase
2518	 63.43	-2	2936731..2938803	+	690	153005397	-	Anae109_2537	-	putative serine protein kinase, PrkA
2519	 66.67	-1	2938852..2939958	+	368	153005398	-	Anae109_2538	-	hypothetical protein
2520	 64.05	-2	2939967..2941454	+	495	153005399	-	Anae109_2539	-	SpoVR family protein
2521	 74.11	0	2941568..2942857	+	429	153005400	-	Anae109_2540	-	peptidase M23B
2522	 70.21	0	2943082..2943420	-	112	153005401	-	Anae109_2541	-	hypothetical protein
2523	 75.16	0	2943908..2944225	-	105	153005402	-	Anae109_2542	-	hypothetical protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.