IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2393	 70.94	0	2794603..2795211	-	202	153005272	-	Anae109_2412	-	hypothetical protein
2394	 73.62	0	2795346..2797085	-	579	153005273	-	Anae109_2413	-	chloride channel core
2395	 75.12	0	2797428..2798291	+	287	153005274	-	Anae109_2414	-	hypothetical protein
2396	 77.37	+1	2798293..2798619	+	108	153005275	-	Anae109_2415	-	hypothetical protein
2397	 74.22	0	2798630..2799940	-	436	153005276	-	Anae109_2416	-	major facilitator transporter
2398	 75.29	0	2799942..2802503	-	853	153005277	-	Anae109_2417	-	peptidase M1 membrane alanine aminopeptidase
2399	 69.88	0	2802659..2803156	-	165	153005278	-	Anae109_2418	-	Ferritin Dps family protein
2400	 70.06	0	2803290..2805236	+	648	153005279	-	Anae109_2419	-	acyl-CoA dehydrogenase domain-containing protein
2401	 73.60	0	2805313..2806581	+	422	153005280	-	Anae109_2420	-	hypothetical protein
2402	 76.71	0	2806649..2807494	-	281	153005281	-	Anae109_2421	-	hypothetical protein
2403	 73.31	0	2807600..2808577	-	325	153005282	-	Anae109_2422	-	hypothetical protein
2404	 74.96	0	2808583..2809860	-	425	153005283	-	Anae109_2423	-	hypothetical protein
2405	 78.10	+1	2810067..2811851	+	594	153005284	-	Anae109_2424	-	DNA mismatch repair protein MutS domain-containing protein
2406	 73.96	0	2811952..2812938	-	328	153005285	-	Anae109_2425	-	methionine aminopeptidase
2407	 63.82	-2	2812983..2813474	-	163	153005286	-	Anae109_2426	-	hemerythrin HHE cation binding domain-containing protein
2408	 70.57	0	2813627..2815909	-	760	153005287	-	Anae109_2427	-	cytochrome b subunit of nitric oxide reductase
2409	 72.91	0	2816011..2816619	-	202	153005288	-	Anae109_2428	-	hemerythrin HHE cation binding domain-containing protein
2410	 73.55	0	2816811..2818379	+	522	153005289	-	Anae109_2429	-	NifA subfamily transcriptional regulator
2411	 75.74	0	2818523..2820760	-	745	153005290	-	Anae109_2430	-	homoserine O-acetyltransferase
2412	 77.45	+1	2820837..2823044	-	735	153005291	-	Anae109_2431	-	peptidase S9B dipeptidylpeptidase IV subunit
2413	 76.76	0	2823201..2824082	-	293	153005292	-	Anae109_2432	-	molybdopterin-guanine dinucleotide biosynthesis protein B
2414	 79.43	+1	2824079..2825245	-	388	153005293	-	Anae109_2433	-	molybdenum cofactor synthesis domain-containing protein
2415	 72.60	0	2825591..2826247	+	218	153005294	-	Anae109_2434	-	CRP/FNR family transcriptional regulator
2416	 65.24	-2	2826296..2826505	+	69	153005295	-	Anae109_2435	-	twin arginine-targeting protein translocase
2417	 69.74	0	2826790..2827212	+	140	153005296	-	Anae109_2436	-	UspA domain-containing protein
2418	 72.65	0	2827306..2827806	+	166	153005297	-	Anae109_2437	-	signal transduction protein
2419	 73.02	0	2827905..2829053	+	382	153005298	-	Anae109_2438	-	histidine kinase
2420	 74.76	0	2829073..2829789	+	238	153005299	-	Anae109_2439	-	response regulator receiver protein
2421	 73.76	0	2829786..2830913	+	375	153005300	-	Anae109_2440	-	response regulator receiver sensor signal transduction histidine kinase
2422	 78.03	+1	2831003..2831521	+	172	153005301	-	Anae109_2441	-	hypothetical protein
2423	 71.31	0	2831554..2832996	-	480	153005302	-	Anae109_2442	-	two component, sigma54 specific, Fis family transcriptional regulator
2424	 74.19	0	2833123..2833800	-	225	153005303	-	Anae109_2443	-	radical SAM domain-containing protein
2425	 73.14	0	2833924..2834232	-	102	153005304	-	Anae109_2444	-	TraR/DksA family transcriptional regulator
2426	 74.92	0	2834386..2835039	-	217	153005305	-	Anae109_2445	-	nicotinamidase
2427	 73.08	0	2835196..2836800	+	534	153005306	-	Anae109_2446	-	metal dependent phosphohydrolase
2428	 71.21	0	2836824..2837549	+	241	153005307	-	Anae109_2447	-	HAD family hydrolase
2429	 73.97	0	2837566..2838345	-	259	153005308	-	Anae109_2448	-	TatD family hydrolase
2430	 71.70	0	2838646..2840730	-	694	153005309	-	Anae109_2449	-	methionyl-tRNA synthetase
2431	 76.11	0	2840727..2842103	-	458	153005310	-	Anae109_2450	-	DNA polymerase III delta
2432	 77.97	+1	2842090..2843133	-	347	153005311	-	Anae109_2451	-	DNA polymerase III, delta prime subunit
2433	 77.39	+1	2843293..2844672	-	459	153005312	-	Anae109_2452	-	histidine kinase
2434	 67.93	-1	2844757..2845311	+	184	153005313	-	Anae109_2453	-	DivIVA family protein
2435	 75.37	0	2845338..2846015	-	225	153005314	-	Anae109_2454	-	carbonic anhydrase
2436	 74.19	0	2846143..2848842	-	899	153005315	-	Anae109_2455	-	DNA polymerase I
2437	 75.74	0	2848976..2849581	-	201	153005316	-	Anae109_2456	-	FHA domain-containing protein
2438	 74.91	0	2849631..2852153	-	840	153005317	-	Anae109_2457	-	hypothetical protein
2439	 74.69	0	2852153..2853436	-	427	153005318	-	Anae109_2458	-	hypothetical protein
2440	 73.54	0	2853520..2855613	-	697	153005319	-	Anae109_2459	-	glycyl-tRNA synthetase, beta subunit
2441	 69.32	-1	2855650..2856630	-	326	153005320	-	Anae109_2460	-	glycyl-tRNA synthetase subunit alpha
2442	 77.29	+1	2856715..2857665	-	316	153005321	-	Anae109_2461	-	ribokinase-like domain-containing protein
2443	 79.38	+1	2857670..2858440	-	256	153005322	-	Anae109_2462	-	DNA repair protein RecO
2444	 79.95	+1	2858496..2858924	-	142	153005323	-	Anae109_2463	-	hypothetical protein
2445	 76.28	0	2858928..2859686	-	252	153005324	-	Anae109_2464	-	TPR repeat-containing protein
2446	 72.67	0	2859686..2860168	-	160	153005325	-	Anae109_2465	-	hypothetical protein
2447	 74.06	0	2860181..2860789	-	202	153005326	-	Anae109_2466	-	hypothetical protein
2448	 73.14	0	2860888..2861520	-	210	153005327	-	Anae109_2467	-	radical SAM domain-containing protein
2449	 78.44	+1	2861553..2862257	-	234	153005328	-	Anae109_2468	-	lytic transglycosylase catalytic
2450	 73.58	0	2862254..2862571	-	105	153005329	-	Anae109_2469	-	hypothetical protein
2451	 71.65	0	2862574..2863035	-	153	153005330	-	Anae109_2470	-	hypothetical protein
2452	 75.27	0	2863226..2864317	-	363	153005331	-	Anae109_2471	-	dihydroorotate oxidase
2453	 72.71	0	2864448..2864927	-	159	153005332	-	Anae109_2472	-	ribosomal-protein-alanine acetyltransferase
2454	 78.38	+1	2864930..2865595	-	221	153005333	-	Anae109_2473	-	hypothetical protein
2455	 73.21	0	2865685..2866647	+	320	153005334	-	Anae109_2474	-	chaperone DnaJ domain-containing protein
2456	 73.07	0	2866672..2867421	+	249	153005335	-	Anae109_2475	-	hypothetical protein
2457	 74.10	0	2867451..2870060	+	869	153005336	-	Anae109_2476	-	glycerol-3-phosphate O-acyltransferase
2458	 66.73	-1	2870192..2871724	+	510	153005337	-	Anae109_2477	-	Acetyl-CoA hydrolase
2459	 77.90	+1	2871823..2872614	+	263	153005338	-	Anae109_2478	-	inositol monophosphatase
2460	 77.68	+1	2872514..2873203	-	229	153005339	-	Anae109_2479	-	GCN5-related N-acetyltransferase
2461	 78.38	+1	2873258..2874760	-	500	153005340	-	Anae109_2480	-	ATPase central domain-containing protein
2462	 72.44	0	2874757..2876592	-	611	153005341	-	Anae109_2481	-	type II secretion system protein E
2463	 74.24	0	2876696..2876893	-	65	153005342	-	Anae109_2482	-	FmdB family regulatory protein
2464	 71.77	0	2877308..2878189	+	293	153005343	-	Anae109_2483	-	hypothetical protein
2465	 74.19	0	2878259..2878750	-	163	153005344	-	Anae109_2484	-	hypothetical protein
2466	 67.59	-1	2878827..2879474	-	215	153005345	-	Anae109_2485	-	inorganic diphosphatase
2467	 71.34	0	2879517..2880458	-	313	153005346	-	Anae109_2486	-	Serine O-acetyltransferase
2468	 69.68	0	2880455..2881384	-	309	153005347	-	Anae109_2487	-	cysteine synthase A
2469	 73.22	0	2881472..2883622	-	716	153005348	-	Anae109_2488	-	excinuclease ABC, C subunit
2470	 75.38	0	2883734..2884399	-	221	153005349	-	Anae109_2489	-	hypothetical protein
2471	 71.32	0	2884547..2885578	-	343	153005350	-	Anae109_2490	-	cytochrome c class I
2472	 73.63	0	2885829..2887709	+	626	153005351	-	Anae109_2491	-	histidine kinase
2473	 74.03	0	2887709..2889067	+	452	153005352	-	Anae109_2492	-	two component, sigma54 specific, Fis family transcriptional regulator
2474	 70.41	0	2889080..2891269	-	729	153005353	-	Anae109_2493	-	excinuclease ABC subunit B
2475	 66.67	-1	2891368..2891571	+	67	153005354	-	Anae109_2494	-	cold-shock DNA-binding domain-containing protein
2476	 72.04	0	2891656..2891841	+	61	153005355	-	Anae109_2495	-	hypothetical protein
2477	 71.91	0	2891884..2893332	-	482	153005356	-	Anae109_2496	-	cysteinyl-tRNA synthetase
2478	 78.04	+1	2893344..2894504	-	386	153005357	-	Anae109_2497	-	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
2479	 61.63	-2	2894687..2895202	-	171	153005358	-	Anae109_2498	-	CarD family transcriptional regulator
2480	 79.72	+1	2895364..2897715	+	783	153005359	-	Anae109_2499	-	DNA internalization-related competence protein ComEC/Rec2
2481	 67.42	-1	2897718..2897981	+	87	153005360	-	Anae109_2500	-	hypothetical protein
2482	 78.50	+1	2897996..2898916	+	306	153005361	-	Anae109_2501	-	FHA domain-containing protein
2483	 71.67	0	2899085..2899504	-	139	153005362	-	Anae109_2502	-	hypothetical protein
2484	 78.13	+1	2899684..2900913	-	409	153005363	-	Anae109_2503	-	TPR repeat-containing protein
2485	 71.30	0	2900989..2902284	-	431	153005364	-	Anae109_2504	-	adenylosuccinate synthetase
2486	 79.17	+1	2902377..2903408	-	343	153005365	-	Anae109_2505	-	histidine--tRNA ligase
2487	 73.72	0	2903515..2905101	-	528	153005366	-	Anae109_2506	-	D-3-phosphoglycerate dehydrogenase
2488	 71.07	0	2905320..2905955	-	211	153005367	-	Anae109_2507	-	TetR family transcriptional regulator
2489	 75.39	0	2906036..2908465	-	809	153005368	-	Anae109_2508	-	organic solvent tolerance protein OstA-like protein
2490	 75.89	0	2908505..2910055	-	516	153005369	-	Anae109_2509	-	hypothetical protein
2491	 77.56	+1	2910146..2911357	-	403	153005370	-	Anae109_2510	-	FolC bifunctional protein
2492	 69.46	-1	2911484..2912341	-	285	153005371	-	Anae109_2511	-	acetyl-CoA carboxylase, carboxyl transferase, beta subunit
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.