IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2339	 69.54	0	2724366..2725478	+	370	153005218	-	Anae109_2357	-	fatty acid desaturase
2340	 76.04	0	2726001..2726651	+	216	153005219	-	Anae109_2358	-	methyltransferase type 11
2341	 74.87	0	2726660..2728012	+	450	153005220	-	Anae109_2359	-	radical SAM domain-containing protein
2342	 69.35	-1	2728537..2728872	+	111	153005221	-	Anae109_2360	-	thioredoxin domain-containing protein
2343	 69.71	0	2728889..2729809	+	306	153005222	-	Anae109_2361	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
2344	 75.42	0	2729854..2730447	-	197	153005223	-	Anae109_2362	-	hypothetical protein
2345	 72.61	0	2730447..2731271	-	274	153005224	-	Anae109_2363	-	metallophosphoesterase
2346	 70.54	0	2731394..2731780	+	128	153005225	-	Anae109_2364	-	lactoylglutathione lyase
2347	 75.56	0	2731787..2733991	-	734	153005226	-	Anae109_2365	-	multi-sensor signal transduction histidine kinase
2348	 74.32	0	2733988..2735046	-	352	153005227	-	Anae109_2366	-	response regulator receiver modulated CheB methylesterase
2349	 78.57	+1	2735043..2737109	-	688	153005228	-	Anae109_2367	-	CheA signal transduction histidine kinase
2350	 72.79	0	2737115..2738584	-	489	153005229	-	Anae109_2368	-	methyl-accepting chemotaxis sensory transducer
2351	 78.61	+1	2738586..2739104	-	172	153005230	-	Anae109_2369	-	putative CheW protein
2352	 76.85	0	2739101..2740642	-	513	153005231	-	Anae109_2370	-	protein-glutamate O-methyltransferase
2353	 77.06	+1	2740639..2741100	-	153	153005232	-	Anae109_2371	-	putative CheW protein
2354	 72.62	0	2741438..2742982	+	514	153005233	-	Anae109_2372	-	hypothetical protein
2355	 73.20	0	2743007..2744797	-	596	153005234	-	Anae109_2373	-	glycoside hydrolase 15-related
2356	 75.34	0	2744910..2745728	+	272	153005235	-	Anae109_2374	-	Co/Zn/Cd efflux system component
2357	 75.25	0	2745779..2746477	-	232	153005236	-	Anae109_2375	-	hypothetical protein
2358	 79.21	+1	2747244..2747849	+	201	153005237	-	Anae109_2376	-	hypothetical protein
2359	 78.09	+1	2747855..2749246	+	463	153005238	-	Anae109_2377	-	TPR repeat-containing protein
2360	 79.08	+1	2749246..2750502	+	418	153005239	-	Anae109_2378	-	histidine kinase
2361	 75.09	0	2750499..2751839	+	446	153005240	-	Anae109_2379	-	two component, sigma54 specific, Fis family transcriptional regulator
2362	 79.66	+1	2751939..2752892	+	317	153005241	-	Anae109_2380	-	2-dehydropantoate 2-reductase
2363	 81.69	+2	2752911..2754155	-	414	153005242	-	Anae109_2381	-	outer membrane efflux protein
2364	 74.42	0	2754142..2757264	-	1040	153005243	-	Anae109_2382	-	CzcA family heavy metal efflux protein
2365	 78.22	+1	2757264..2758856	-	530	153005244	-	Anae109_2383	-	RND family efflux transporter MFP subunit
2366	 72.70	0	2758853..2759134	-	93	153005245	-	Anae109_2384	-	hypothetical protein
2367	 79.94	+1	2759245..2759553	-	102	153005246	-	Anae109_2385	-	hypothetical protein
2368	 71.83	0	2759710..2761104	+	464	153005247	-	Anae109_2386	-	hypothetical protein
2369	 74.40	0	2761190..2762392	-	400	153005248	-	Anae109_2387	-	histidine kinase
2370	 78.39	+1	2762974..2764926	+	650	153005249	-	Anae109_2388	-	chloride channel core
2371	 77.57	+1	2764923..2765729	-	268	153005250	-	Anae109_2389	-	HAD family hydrolase
2372	 73.27	0	2765726..2767996	-	756	153005251	-	Anae109_2390	-	Alpha,alpha-trehalose-phosphate synthase (UDP-forming)
2373	 73.14	0	2768123..2768647	-	174	153005252	-	Anae109_2391	-	response regulator receiver protein
2374	 72.56	0	2768735..2773384	+	1549	153005253	-	Anae109_2392	-	AMP-dependent synthetase and ligase
2375	 70.82	0	2773394..2774524	+	376	153005254	-	Anae109_2393	-	homocitrate synthase
2376	 74.70	0	2774610..2775455	+	281	153005255	-	Anae109_2394	-	hypothetical protein
2377	 72.11	0	2775465..2776640	-	391	153005256	-	Anae109_2395	-	patatin
2378	 71.28	0	2776742..2777131	-	129	153005257	-	Anae109_2396	-	amino acid-binding ACT domain-containing protein
2379	 75.35	0	2777229..2778242	-	337	153005258	-	Anae109_2397	-	D-cysteine desulfhydrase
2380	 73.81	0	2778528..2780123	+	531	153005259	-	Anae109_2398	-	hypothetical protein
2381	 72.94	0	2780276..2781454	+	392	153005260	-	Anae109_2399	-	methyl-accepting chemotaxis sensory transducer
2382	 80.26	+1	2782215..2782832	+	205	153005261	-	Anae109_2401	-	DTW domain-containing protein
2383	 75.19	0	2782845..2785025	+	726	153005262	-	Anae109_2402	-	queuine tRNA-ribosyltransferase
2384	 77.22	+1	2785022..2786092	+	356	153005263	-	Anae109_2403	-	alpha/beta hydrolase fold
2385	 76.57	0	2786100..2787281	-	393	153005264	-	Anae109_2404	-	acyltransferase family protein
2386	 66.67	-1	2787424..2787726	-	100	153005265	-	Anae109_2405	-	cytochrome c class I
2387	 67.22	-1	2787745..2788998	-	417	153005266	-	Anae109_2406	-	polysulphide reductase NrfD
2388	 69.70	0	2789009..2789932	-	307	153005267	-	Anae109_2407	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
2389	 73.16	0	2789935..2790612	-	225	153005268	-	Anae109_2408	-	hypothetical protein
2390	 76.55	0	2790721..2792208	-	495	153005269	-	Anae109_2409	-	radical SAM domain-containing protein
2391	 73.82	0	2792707..2793237	+	176	153005270	-	Anae109_2410	-	HNH endonuclease
2392	 74.50	0	2793690..2794646	+	318	153005271	-	Anae109_2411	-	abortive infection protein
2393	 70.94	0	2794603..2795211	-	202	153005272	-	Anae109_2412	-	hypothetical protein
2394	 73.62	0	2795346..2797085	-	579	153005273	-	Anae109_2413	-	chloride channel core
2395	 75.12	0	2797428..2798291	+	287	153005274	-	Anae109_2414	-	hypothetical protein
2396	 77.37	+1	2798293..2798619	+	108	153005275	-	Anae109_2415	-	hypothetical protein
2397	 74.22	0	2798630..2799940	-	436	153005276	-	Anae109_2416	-	major facilitator transporter
2398	 75.29	0	2799942..2802503	-	853	153005277	-	Anae109_2417	-	peptidase M1 membrane alanine aminopeptidase
2399	 69.88	0	2802659..2803156	-	165	153005278	-	Anae109_2418	-	Ferritin Dps family protein
2400	 70.06	0	2803290..2805236	+	648	153005279	-	Anae109_2419	-	acyl-CoA dehydrogenase domain-containing protein
2401	 73.60	0	2805313..2806581	+	422	153005280	-	Anae109_2420	-	hypothetical protein
2402	 76.71	0	2806649..2807494	-	281	153005281	-	Anae109_2421	-	hypothetical protein
2403	 73.31	0	2807600..2808577	-	325	153005282	-	Anae109_2422	-	hypothetical protein
2404	 74.96	0	2808583..2809860	-	425	153005283	-	Anae109_2423	-	hypothetical protein
2405	 78.10	+1	2810067..2811851	+	594	153005284	-	Anae109_2424	-	DNA mismatch repair protein MutS domain-containing protein
2406	 73.96	0	2811952..2812938	-	328	153005285	-	Anae109_2425	-	methionine aminopeptidase
2407	 63.82	-2	2812983..2813474	-	163	153005286	-	Anae109_2426	-	hemerythrin HHE cation binding domain-containing protein
2408	 70.57	0	2813627..2815909	-	760	153005287	-	Anae109_2427	-	cytochrome b subunit of nitric oxide reductase
2409	 72.91	0	2816011..2816619	-	202	153005288	-	Anae109_2428	-	hemerythrin HHE cation binding domain-containing protein
2410	 73.55	0	2816811..2818379	+	522	153005289	-	Anae109_2429	-	NifA subfamily transcriptional regulator
2411	 75.74	0	2818523..2820760	-	745	153005290	-	Anae109_2430	-	homoserine O-acetyltransferase
2412	 77.45	+1	2820837..2823044	-	735	153005291	-	Anae109_2431	-	peptidase S9B dipeptidylpeptidase IV subunit
2413	 76.76	0	2823201..2824082	-	293	153005292	-	Anae109_2432	-	molybdopterin-guanine dinucleotide biosynthesis protein B
2414	 79.43	+1	2824079..2825245	-	388	153005293	-	Anae109_2433	-	molybdenum cofactor synthesis domain-containing protein
2415	 72.60	0	2825591..2826247	+	218	153005294	-	Anae109_2434	-	CRP/FNR family transcriptional regulator
2416	 65.24	-2	2826296..2826505	+	69	153005295	-	Anae109_2435	-	twin arginine-targeting protein translocase
2417	 69.74	0	2826790..2827212	+	140	153005296	-	Anae109_2436	-	UspA domain-containing protein
2418	 72.65	0	2827306..2827806	+	166	153005297	-	Anae109_2437	-	signal transduction protein
2419	 73.02	0	2827905..2829053	+	382	153005298	-	Anae109_2438	-	histidine kinase
2420	 74.76	0	2829073..2829789	+	238	153005299	-	Anae109_2439	-	response regulator receiver protein
2421	 73.76	0	2829786..2830913	+	375	153005300	-	Anae109_2440	-	response regulator receiver sensor signal transduction histidine kinase
2422	 78.03	+1	2831003..2831521	+	172	153005301	-	Anae109_2441	-	hypothetical protein
2423	 71.31	0	2831554..2832996	-	480	153005302	-	Anae109_2442	-	two component, sigma54 specific, Fis family transcriptional regulator
2424	 74.19	0	2833123..2833800	-	225	153005303	-	Anae109_2443	-	radical SAM domain-containing protein
2425	 73.14	0	2833924..2834232	-	102	153005304	-	Anae109_2444	-	TraR/DksA family transcriptional regulator
2426	 74.92	0	2834386..2835039	-	217	153005305	-	Anae109_2445	-	nicotinamidase
2427	 73.08	0	2835196..2836800	+	534	153005306	-	Anae109_2446	-	metal dependent phosphohydrolase
2428	 71.21	0	2836824..2837549	+	241	153005307	-	Anae109_2447	-	HAD family hydrolase
2429	 73.97	0	2837566..2838345	-	259	153005308	-	Anae109_2448	-	TatD family hydrolase
2430	 71.70	0	2838646..2840730	-	694	153005309	-	Anae109_2449	-	methionyl-tRNA synthetase
2431	 76.11	0	2840727..2842103	-	458	153005310	-	Anae109_2450	-	DNA polymerase III delta
2432	 77.97	+1	2842090..2843133	-	347	153005311	-	Anae109_2451	-	DNA polymerase III, delta prime subunit
2433	 77.39	+1	2843293..2844672	-	459	153005312	-	Anae109_2452	-	histidine kinase
2434	 67.93	-1	2844757..2845311	+	184	153005313	-	Anae109_2453	-	DivIVA family protein
2435	 75.37	0	2845338..2846015	-	225	153005314	-	Anae109_2454	-	carbonic anhydrase
2436	 74.19	0	2846143..2848842	-	899	153005315	-	Anae109_2455	-	DNA polymerase I
2437	 75.74	0	2848976..2849581	-	201	153005316	-	Anae109_2456	-	FHA domain-containing protein
2438	 74.91	0	2849631..2852153	-	840	153005317	-	Anae109_2457	-	hypothetical protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.