IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2284	 71.13	0	2608519..2609370	-	283	153005163	-	Anae109_2302	-	hydroxymethylbutenyl pyrophosphate reductase
2285	 74.62	0	2609435..2610214	-	259	153005164	-	Anae109_2303	-	ABC transporter related
2286	 77.07	+1	2610214..2610780	-	188	153005165	-	Anae109_2304	-	hypothetical protein
2287	 74.72	0	2610767..2611399	-	210	153005166	-	Anae109_2305	-	cobalamin (vitamin B12) biosynthesis CbiM protein
2288	 74.22	0	2611402..2611851	-	149	153005167	-	Anae109_2306	-	hypothetical protein
2289	 74.92	0	2612042..2613361	+	439	153005168	-	Anae109_2307	-	putative esterase
2290	 73.33	0	2613358..2614047	-	229	153005169	-	Anae109_2308	-	hypothetical protein
2291	 75.91	0	2614047..2614760	-	237	153005170	-	Anae109_2309	-	cytidylate kinase
2292	 71.51	0	2614757..2615851	-	364	153005171	-	Anae109_2310	-	histidinol-phosphate aminotransferase
2293	 68.83	-1	2615900..2616868	-	322	153005172	-	Anae109_2311	-	acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
2294	 78.52	+1	2616923..2617825	-	300	153005173	-	Anae109_2312	-	tRNA delta(2)-isopentenylpyrophosphate transferase
2295	 72.44	0	2617822..2619069	-	415	153005174	-	Anae109_2313	-	histidyl-tRNA synthetase
2296	 74.56	0	2619096..2619944	-	282	153005175	-	Anae109_2314	-	phosphatidylserine decarboxylase
2297	 73.98	0	2620061..2621701	+	546	153005176	-	Anae109_2315	-	urocanate hydratase
2298	 76.42	0	2622053..2623333	+	426	153005177	-	Anae109_2316	-	imidazolonepropionase
2299	 75.43	0	2623339..2623863	+	174	153005178	-	Anae109_2317	-	phosphodiesterase
2300	 77.37	+1	2623860..2624438	+	192	153005179	-	Anae109_2318	-	hypothetical protein
2301	 74.77	0	2624680..2625444	+	254	153005180	-	Anae109_2319	-	glutamine amidotransferase class-II
2302	 74.62	0	2625447..2627093	-	548	153005181	-	Anae109_2320	-	putative mucoidy inhibitor A
2303	 70.69	0	2627408..2628301	-	297	153005182	-	Anae109_2321	-	hypothetical protein
2304	 69.08	-1	2629042..2631234	-	730	153005183	-	Anae109_2322	-	YD repeat-containing protein
2305	 67.69	-1	2631231..2631620	-	129	153005184	-	Anae109_2323	-	hypothetical protein
2306	 69.06	-1	2632307..2634604	-	765	153005185	-	Anae109_2324	-	YD repeat-containing protein
2307	 70.92	0	2635644..2653973	-	6109	153005186	-	Anae109_2325	-	YD repeat-containing protein
2308	 72.09	0	2653970..2654836	-	288	153005187	-	Anae109_2326	-	PpiC-type peptidyl-prolyl cis-trans isomerase
2309	 72.59	0	2654874..2692928	-	12684	153005188	-	Anae109_2327	-	cell surface receptor IPT/TIG domain-containing protein
2310	 72.50	0	2692949..2693977	-	342	153005189	-	Anae109_2328	-	PpiC-type peptidyl-prolyl cis-trans isomerase
2311	 69.47	0	2694107..2695069	+	320	153005190	-	Anae109_2329	-	PpiC-type peptidyl-prolyl cis-trans isomerase
2312	 76.87	0	2695141..2695689	-	182	153005191	-	Anae109_2330	-	hypothetical protein
2313	 78.84	+1	2695686..2697221	-	511	153005192	-	Anae109_2331	-	carbohydrate kinase, YjeF related protein
2314	 77.69	+1	2697218..2697607	-	129	153005193	-	Anae109_2332	-	holo-acyl-carrier-protein synthase
2315	 70.92	0	2697666..2698394	-	242	153005194	-	Anae109_2333	-	pyridoxal phosphate biosynthetic protein PdxJ
2316	 70.92	0	2698544..2699953	-	469	153005195	-	Anae109_2334	-	phosphoglucosamine mutase
2317	 75.81	0	2700076..2700447	-	123	153005196	-	Anae109_2335	-	hypothetical protein
2318	 75.53	0	2700434..2701324	-	296	153005197	-	Anae109_2336	-	hypothetical protein
2319	 76.28	0	2701383..2702225	-	280	153005198	-	Anae109_2337	-	dihydropteroate synthase
2320	 67.45	-1	2702299..2704203	-	634	153005199	-	Anae109_2338	-	ATP-dependent metalloprotease FtsH
2321	 76.13	0	2704350..2705660	-	436	153005200	-	Anae109_2339	-	tRNA(Ile)-lysidine synthetase
2322	 65.28	-2	2706192..2706407	+	71	153005201	-	Anae109_2340	-	hypothetical protein
2323	 77.95	+1	2706545..2707900	+	451	153005202	-	Anae109_2341	-	hypothetical protein
2324	 73.46	0	2708262..2709629	+	455	153005203	-	Anae109_2342	-	ammonium transporter
2325	 69.71	0	2709828..2710649	+	273	153005204	-	Anae109_2343	-	hypothetical protein
2326	 73.82	0	2710725..2711213	-	162	153005205	-	Anae109_2344	-	type IV pilus assembly PilZ
2327	 73.50	0	2711334..2712152	-	272	153005206	-	Anae109_2345	-	hypothetical protein
2328	 73.68	0	2712183..2712581	-	132	153005207	-	Anae109_2346	-	acyl-CoA hydrolase
2329	 72.27	0	2712581..2713348	-	255	153005208	-	Anae109_2347	-	cobalamin vitamin B12-binding protein
2330	 77.11	+1	2713351..2713896	-	181	153005209	-	Anae109_2348	-	hypothetical protein
2331	 71.18	0	2713893..2715464	-	523	153005210	-	Anae109_2349	-	D-lysine 56-aminomutase alpha subunit
2332	 79.45	+1	2715528..2716880	-	450	153005211	-	Anae109_2350	-	RNA modification protein
2333	 76.00	0	2716864..2717913	-	349	153005212	-	Anae109_2351	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
2334	 73.11	0	2717946..2719202	-	418	153005213	-	Anae109_2352	-	response regulator receiver sensor signal transduction histidine kinase
2335	 76.63	0	2719221..2720525	-	434	153005214	-	Anae109_2353	-	tRNA cytidylyltransferase
2336	 72.94	0	2720530..2720832	-	100	153005215	-	Anae109_2354	-	hypothetical protein
2337	 69.18	-1	2721066..2721503	-	145	153005216	-	Anae109_2355	-	signal-transduction protein
2338	 73.07	0	2721750..2724044	-	764	153005217	-	Anae109_2356	-	PAS/PAC sensor hybrid histidine kinase
2339	 69.54	0	2724366..2725478	+	370	153005218	-	Anae109_2357	-	fatty acid desaturase
2340	 76.04	0	2726001..2726651	+	216	153005219	-	Anae109_2358	-	methyltransferase type 11
2341	 74.87	0	2726660..2728012	+	450	153005220	-	Anae109_2359	-	radical SAM domain-containing protein
2342	 69.35	-1	2728537..2728872	+	111	153005221	-	Anae109_2360	-	thioredoxin domain-containing protein
2343	 69.71	0	2728889..2729809	+	306	153005222	-	Anae109_2361	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
2344	 75.42	0	2729854..2730447	-	197	153005223	-	Anae109_2362	-	hypothetical protein
2345	 72.61	0	2730447..2731271	-	274	153005224	-	Anae109_2363	-	metallophosphoesterase
2346	 70.54	0	2731394..2731780	+	128	153005225	-	Anae109_2364	-	lactoylglutathione lyase
2347	 75.56	0	2731787..2733991	-	734	153005226	-	Anae109_2365	-	multi-sensor signal transduction histidine kinase
2348	 74.32	0	2733988..2735046	-	352	153005227	-	Anae109_2366	-	response regulator receiver modulated CheB methylesterase
2349	 78.57	+1	2735043..2737109	-	688	153005228	-	Anae109_2367	-	CheA signal transduction histidine kinase
2350	 72.79	0	2737115..2738584	-	489	153005229	-	Anae109_2368	-	methyl-accepting chemotaxis sensory transducer
2351	 78.61	+1	2738586..2739104	-	172	153005230	-	Anae109_2369	-	putative CheW protein
2352	 76.85	0	2739101..2740642	-	513	153005231	-	Anae109_2370	-	protein-glutamate O-methyltransferase
2353	 77.06	+1	2740639..2741100	-	153	153005232	-	Anae109_2371	-	putative CheW protein
2354	 72.62	0	2741438..2742982	+	514	153005233	-	Anae109_2372	-	hypothetical protein
2355	 73.20	0	2743007..2744797	-	596	153005234	-	Anae109_2373	-	glycoside hydrolase 15-related
2356	 75.34	0	2744910..2745728	+	272	153005235	-	Anae109_2374	-	Co/Zn/Cd efflux system component
2357	 75.25	0	2745779..2746477	-	232	153005236	-	Anae109_2375	-	hypothetical protein
2358	 79.21	+1	2747244..2747849	+	201	153005237	-	Anae109_2376	-	hypothetical protein
2359	 78.09	+1	2747855..2749246	+	463	153005238	-	Anae109_2377	-	TPR repeat-containing protein
2360	 79.08	+1	2749246..2750502	+	418	153005239	-	Anae109_2378	-	histidine kinase
2361	 75.09	0	2750499..2751839	+	446	153005240	-	Anae109_2379	-	two component, sigma54 specific, Fis family transcriptional regulator
2362	 79.66	+1	2751939..2752892	+	317	153005241	-	Anae109_2380	-	2-dehydropantoate 2-reductase
2363	 81.69	+2	2752911..2754155	-	414	153005242	-	Anae109_2381	-	outer membrane efflux protein
2364	 74.42	0	2754142..2757264	-	1040	153005243	-	Anae109_2382	-	CzcA family heavy metal efflux protein
2365	 78.22	+1	2757264..2758856	-	530	153005244	-	Anae109_2383	-	RND family efflux transporter MFP subunit
2366	 72.70	0	2758853..2759134	-	93	153005245	-	Anae109_2384	-	hypothetical protein
2367	 79.94	+1	2759245..2759553	-	102	153005246	-	Anae109_2385	-	hypothetical protein
2368	 71.83	0	2759710..2761104	+	464	153005247	-	Anae109_2386	-	hypothetical protein
2369	 74.40	0	2761190..2762392	-	400	153005248	-	Anae109_2387	-	histidine kinase
2370	 78.39	+1	2762974..2764926	+	650	153005249	-	Anae109_2388	-	chloride channel core
2371	 77.57	+1	2764923..2765729	-	268	153005250	-	Anae109_2389	-	HAD family hydrolase
2372	 73.27	0	2765726..2767996	-	756	153005251	-	Anae109_2390	-	Alpha,alpha-trehalose-phosphate synthase (UDP-forming)
2373	 73.14	0	2768123..2768647	-	174	153005252	-	Anae109_2391	-	response regulator receiver protein
2374	 72.56	0	2768735..2773384	+	1549	153005253	-	Anae109_2392	-	AMP-dependent synthetase and ligase
2375	 70.82	0	2773394..2774524	+	376	153005254	-	Anae109_2393	-	homocitrate synthase
2376	 74.70	0	2774610..2775455	+	281	153005255	-	Anae109_2394	-	hypothetical protein
2377	 72.11	0	2775465..2776640	-	391	153005256	-	Anae109_2395	-	patatin
2378	 71.28	0	2776742..2777131	-	129	153005257	-	Anae109_2396	-	amino acid-binding ACT domain-containing protein
2379	 75.35	0	2777229..2778242	-	337	153005258	-	Anae109_2397	-	D-cysteine desulfhydrase
2380	 73.81	0	2778528..2780123	+	531	153005259	-	Anae109_2398	-	hypothetical protein
2381	 72.94	0	2780276..2781454	+	392	153005260	-	Anae109_2399	-	methyl-accepting chemotaxis sensory transducer
2382	 80.26	+1	2782215..2782832	+	205	153005261	-	Anae109_2401	-	DTW domain-containing protein
2383	 75.19	0	2782845..2785025	+	726	153005262	-	Anae109_2402	-	queuine tRNA-ribosyltransferase
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.