IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2228	 73.58	0	2553167..2553730	-	187	153005107	-	Anae109_2246	-	hypothetical protein
2229	 71.22	0	2553748..2555043	-	431	153005108	-	Anae109_2247	-	hypothetical protein
2230	 73.93	0	2555120..2555794	-	224	153005109	-	Anae109_2248	-	iron dependent repressor
2231	 74.56	0	2555803..2556030	-	75	153005110	-	Anae109_2249	-	hypothetical protein
2232	 70.87	0	2556040..2558109	-	689	153005111	-	Anae109_2250	-	small GTP-binding protein
2233	 71.94	0	2558106..2558636	-	176	153005112	-	Anae109_2251	-	ferric uptake regulator family protein
2234	 75.00	0	2558696..2559511	-	271	153005113	-	Anae109_2252	-	heat domain-containing protein
2235	 80.24	+1	2559508..2560944	-	478	153005114	-	Anae109_2253	-	LigA
2236	 74.32	0	2561070..2561435	-	121	153005115	-	Anae109_2254	-	hypothetical protein
2237	 68.03	-1	2561733..2562464	+	243	153005116	-	Anae109_2255	-	TPR repeat-containing protein
2238	 70.29	0	2562501..2562638	-	45	153005117	-	Anae109_2256	-	glutaredoxin
2239	 75.42	0	2563009..2564538	+	509	153005118	-	Anae109_2257	-	response regulator receiver modulated diguanylate cyclase
2240	 69.79	0	2564680..2566086	-	468	153005119	-	Anae109_2258	-	two component, sigma54 specific, Fis family transcriptional regulator
2241	 74.48	0	2566083..2567003	-	306	153005120	-	Anae109_2259	-	histidine kinase
2242	 75.93	0	2567095..2568519	+	474	153005121	-	Anae109_2260	-	putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like protein
2243	 68.08	-1	2568509..2569003	-	164	153005122	-	Anae109_2261	-	CMP/dCMP deaminase zinc-binding
2244	 76.44	0	2569066..2569587	+	173	153005123	-	Anae109_2262	-	cobalamin biosynthesis protein CbiD
2245	 73.59	0	2569724..2570734	-	336	153005124	-	Anae109_2263	-	peptidase S1 and S6 chymotrypsin/Hap
2246	 68.30	-1	2570790..2572319	+	509	153005125	-	Anae109_2264	-	2-alkenal reductase
2247	 77.17	+1	2572345..2573763	-	472	153005126	-	Anae109_2265	-	hypothetical protein
2248	 66.51	-1	2573916..2575196	-	426	153005127	-	Anae109_2266	-	ATP-dependent protease ATP-binding subunit
2249	 76.17	0	2575315..2575935	-	206	153005128	-	Anae109_2267	-	hypothetical protein
2250	 76.57	0	2575932..2576840	-	302	153005129	-	Anae109_2268	-	hypothetical protein
2251	 75.94	0	2576927..2577724	+	265	153005130	-	Anae109_2269	-	tRNA-pseudouridine synthase I
2252	 69.44	-1	2577839..2578054	-	71	153005131	-	Anae109_2270	-	CopG-like DNA-binding protein
2253	 75.20	0	2578186..2579040	-	284	153005132	-	Anae109_2271	-	hypothetical protein
2254	 75.36	0	2579132..2579833	-	233	153005133	-	Anae109_2272	-	adenylylsulfate kinase
2255	 77.83	+1	2580174..2580872	-	232	153005134	-	Anae109_2273	-	UBA/THIF-type NAD/FAD binding protein
2256	 74.16	0	2580949..2581215	-	88	153005135	-	Anae109_2274	-	SirA-like protein
2257	 77.03	+1	2581212..2581964	-	250	153005136	-	Anae109_2275	-	UBA/THIF-type NAD/FAD binding protein
2258	 75.60	0	2582056..2582514	-	152	153005137	-	Anae109_2276	-	hypothetical protein
2259	 68.11	-1	2582601..2583917	+	438	153005138	-	Anae109_2277	-	inositol-3-phosphate synthase
2260	 63.00	-2	2583950..2584276	+	108	153005139	-	Anae109_2278	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
2261	 72.66	0	2584637..2585020	-	127	153005140	-	Anae109_2279	-	preprotein translocase, SecG subunit
2262	 73.10	0	2585017..2585778	-	253	153005141	-	Anae109_2280	-	Triose-phosphate isomerase
2263	 69.77	0	2585782..2586972	-	396	153005142	-	Anae109_2281	-	phosphoglycerate kinase
2264	 66.17	-1	2586980..2587981	-	333	153005143	-	Anae109_2282	-	glyceraldehyde-3-phosphate dehydrogenase, type I
2265	 66.20	-1	2588169..2588381	-	70	153005144	-	Anae109_2283	-	hypothetical protein
2266	 75.44	0	2588606..2590201	+	531	153005145	-	Anae109_2284	-	FAD dependent oxidoreductase
2267	 73.26	0	2590212..2590484	+	90	153005146	-	Anae109_2285	-	hypothetical protein
2268	 67.22	-1	2590579..2590941	-	120	153005147	-	Anae109_2286	-	cupin 2 domain-containing protein
2269	 77.22	+1	2590957..2591610	-	217	153005148	-	Anae109_2287	-	sporulation domain-containing protein
2270	 71.34	0	2591623..2593440	-	605	153005149	-	Anae109_2288	-	arginyl-tRNA synthetase
2271	 79.38	+1	2593528..2594628	-	366	153005150	-	Anae109_2289	-	TPR repeat-containing protein
2272	 71.92	0	2594633..2595127	-	164	153005151	-	Anae109_2290	-	histidine triad (HIT) protein
2273	 72.84	0	2595148..2596248	-	366	153005152	-	Anae109_2291	-	signal peptide peptidase SppA, 36K type
2274	 72.81	0	2596346..2598136	-	596	153005153	-	Anae109_2292	-	citrate transporter
2275	 74.39	0	2598269..2598721	+	150	153005154	-	Anae109_2293	-	putative CheW protein
2276	 76.90	0	2598718..2600124	+	468	153005155	-	Anae109_2294	-	protein-glutamate O-methyltransferase
2277	 80.70	+1	2600163..2600675	+	170	153005156	-	Anae109_2295	-	putative CheW protein
2278	 74.86	0	2600672..2602306	+	544	153005157	-	Anae109_2296	-	methyl-accepting chemotaxis sensory transducer
2279	 77.79	+1	2602310..2604709	+	799	153005158	-	Anae109_2297	-	CheA signal transduction histidine kinase
2280	 73.84	0	2604706..2605722	+	338	153005159	-	Anae109_2298	-	response regulator receiver modulated CheB methylesterase
2281	 74.73	0	2605772..2606242	+	156	153005160	-	Anae109_2299	-	hypothetical protein
2282	 75.38	0	2606211..2606543	+	110	153005161	-	Anae109_2300	-	hypothetical protein
2283	 65.57	-2	2606604..2608340	-	578	153005162	-	Anae109_2301	-	30S ribosomal protein S1
2284	 71.13	0	2608519..2609370	-	283	153005163	-	Anae109_2302	-	hydroxymethylbutenyl pyrophosphate reductase
2285	 74.62	0	2609435..2610214	-	259	153005164	-	Anae109_2303	-	ABC transporter related
2286	 77.07	+1	2610214..2610780	-	188	153005165	-	Anae109_2304	-	hypothetical protein
2287	 74.72	0	2610767..2611399	-	210	153005166	-	Anae109_2305	-	cobalamin (vitamin B12) biosynthesis CbiM protein
2288	 74.22	0	2611402..2611851	-	149	153005167	-	Anae109_2306	-	hypothetical protein
2289	 74.92	0	2612042..2613361	+	439	153005168	-	Anae109_2307	-	putative esterase
2290	 73.33	0	2613358..2614047	-	229	153005169	-	Anae109_2308	-	hypothetical protein
2291	 75.91	0	2614047..2614760	-	237	153005170	-	Anae109_2309	-	cytidylate kinase
2292	 71.51	0	2614757..2615851	-	364	153005171	-	Anae109_2310	-	histidinol-phosphate aminotransferase
2293	 68.83	-1	2615900..2616868	-	322	153005172	-	Anae109_2311	-	acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
2294	 78.52	+1	2616923..2617825	-	300	153005173	-	Anae109_2312	-	tRNA delta(2)-isopentenylpyrophosphate transferase
2295	 72.44	0	2617822..2619069	-	415	153005174	-	Anae109_2313	-	histidyl-tRNA synthetase
2296	 74.56	0	2619096..2619944	-	282	153005175	-	Anae109_2314	-	phosphatidylserine decarboxylase
2297	 73.98	0	2620061..2621701	+	546	153005176	-	Anae109_2315	-	urocanate hydratase
2298	 76.42	0	2622053..2623333	+	426	153005177	-	Anae109_2316	-	imidazolonepropionase
2299	 75.43	0	2623339..2623863	+	174	153005178	-	Anae109_2317	-	phosphodiesterase
2300	 77.37	+1	2623860..2624438	+	192	153005179	-	Anae109_2318	-	hypothetical protein
2301	 74.77	0	2624680..2625444	+	254	153005180	-	Anae109_2319	-	glutamine amidotransferase class-II
2302	 74.62	0	2625447..2627093	-	548	153005181	-	Anae109_2320	-	putative mucoidy inhibitor A
2303	 70.69	0	2627408..2628301	-	297	153005182	-	Anae109_2321	-	hypothetical protein
2304	 69.08	-1	2629042..2631234	-	730	153005183	-	Anae109_2322	-	YD repeat-containing protein
2305	 67.69	-1	2631231..2631620	-	129	153005184	-	Anae109_2323	-	hypothetical protein
2306	 69.06	-1	2632307..2634604	-	765	153005185	-	Anae109_2324	-	YD repeat-containing protein
2307	 70.92	0	2635644..2653973	-	6109	153005186	-	Anae109_2325	-	YD repeat-containing protein
2308	 72.09	0	2653970..2654836	-	288	153005187	-	Anae109_2326	-	PpiC-type peptidyl-prolyl cis-trans isomerase
2309	 72.59	0	2654874..2692928	-	12684	153005188	-	Anae109_2327	-	cell surface receptor IPT/TIG domain-containing protein
2310	 72.50	0	2692949..2693977	-	342	153005189	-	Anae109_2328	-	PpiC-type peptidyl-prolyl cis-trans isomerase
2311	 69.47	0	2694107..2695069	+	320	153005190	-	Anae109_2329	-	PpiC-type peptidyl-prolyl cis-trans isomerase
2312	 76.87	0	2695141..2695689	-	182	153005191	-	Anae109_2330	-	hypothetical protein
2313	 78.84	+1	2695686..2697221	-	511	153005192	-	Anae109_2331	-	carbohydrate kinase, YjeF related protein
2314	 77.69	+1	2697218..2697607	-	129	153005193	-	Anae109_2332	-	holo-acyl-carrier-protein synthase
2315	 70.92	0	2697666..2698394	-	242	153005194	-	Anae109_2333	-	pyridoxal phosphate biosynthetic protein PdxJ
2316	 70.92	0	2698544..2699953	-	469	153005195	-	Anae109_2334	-	phosphoglucosamine mutase
2317	 75.81	0	2700076..2700447	-	123	153005196	-	Anae109_2335	-	hypothetical protein
2318	 75.53	0	2700434..2701324	-	296	153005197	-	Anae109_2336	-	hypothetical protein
2319	 76.28	0	2701383..2702225	-	280	153005198	-	Anae109_2337	-	dihydropteroate synthase
2320	 67.45	-1	2702299..2704203	-	634	153005199	-	Anae109_2338	-	ATP-dependent metalloprotease FtsH
2321	 76.13	0	2704350..2705660	-	436	153005200	-	Anae109_2339	-	tRNA(Ile)-lysidine synthetase
2322	 65.28	-2	2706192..2706407	+	71	153005201	-	Anae109_2340	-	hypothetical protein
2323	 77.95	+1	2706545..2707900	+	451	153005202	-	Anae109_2341	-	hypothetical protein
2324	 73.46	0	2708262..2709629	+	455	153005203	-	Anae109_2342	-	ammonium transporter
2325	 69.71	0	2709828..2710649	+	273	153005204	-	Anae109_2343	-	hypothetical protein
2326	 73.82	0	2710725..2711213	-	162	153005205	-	Anae109_2344	-	type IV pilus assembly PilZ
2327	 73.50	0	2711334..2712152	-	272	153005206	-	Anae109_2345	-	hypothetical protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.