IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2198	 77.70	+1	2513147..2514451	-	434	153005077	-	Anae109_2216	-	FliI/YscN family ATPase
2199	 80.20	+1	2514486..2515091	-	201	153005078	-	Anae109_2217	-	flagellar assembly protein FliH, putative
2200	 68.31	-1	2515140..2515565	-	141	153005079	-	Anae109_2218	-	CopG family transcriptional regulator
2201	 69.83	0	2515669..2516394	-	241	153005080	-	Anae109_2219	-	RNA polymerase, sigma 32 subunit, RpoH
2202	 66.88	-1	2516822..2521009	-	1395	153005081	-	Anae109_2220	-	DNA-directed RNA polymerase, beta' subunit
2203	 66.01	-1	2521127..2525377	-	1416	153005082	-	Anae109_2221	-	DNA-directed RNA polymerase subunit beta
2204	 67.46	-1	2525593..2525970	-	125	153005083	-	Anae109_2222	-	ribosomal protein L7/L12
2205	 68.00	-1	2526060..2526584	-	174	153005084	-	Anae109_2223	-	ribosomal protein L10
2206	 67.09	-1	2526856..2527560	-	234	153005085	-	Anae109_2224	-	50S ribosomal protein L1
2207	 66.22	-1	2527580..2528026	-	148	153005086	-	Anae109_2225	-	50S ribosomal protein L11
2208	 62.78	-2	2528132..2528671	-	179	153005087	-	Anae109_2226	-	NusG antitermination factor
2209	 67.94	-1	2528793..2529185	-	130	153005088	-	Anae109_2227	-	preprotein translocase, SecE subunit
2210	 57.86	-2	2529400..2529558	-	52	153005089	-	Anae109_2228	-	ribosomal protein L33
2211	 67.51	-1	2529571..2530761	-	396	153005090	-	Anae109_2229	-	elongation factor Tu
2212	 75.47	0	2531402..2532139	-	245	153005091	-	Anae109_2230	-	RNA methyltransferase
2213	 69.27	-1	2532195..2532617	-	140	153005092	-	Anae109_2231	-	hypothetical protein
2214	 74.67	0	2532842..2533816	-	324	153005093	-	Anae109_2232	-	alpha-L-glutamate ligase
2215	 67.20	-1	2534032..2535921	-	629	153005094	-	Anae109_2233	-	chaperone protein DnaK
2216	 74.06	0	2536103..2537251	+	382	153005095	-	Anae109_2234	-	diacylglycerol kinase catalytic region
2217	 73.50	0	2537273..2539423	-	716	153005096	-	Anae109_2235	-	multi-sensor signal transduction histidine kinase
2218	 68.14	-1	2539562..2545204	-	1880	153005097	-	Anae109_2236	-	hypothetical protein
2219	 76.24	0	2545228..2545833	+	201	153005098	-	Anae109_2237	-	hypothetical protein
2220	 70.14	0	2545858..2546145	-	95	153005099	-	Anae109_2238	-	hypothetical protein
2221	 66.37	-1	2546312..2547637	-	441	153005100	-	Anae109_2239	-	PhoH family protein
2222	 75.58	0	2547731..2550007	-	758	153005101	-	Anae109_2240	-	diguanylate cyclase
2223	 76.80	0	2550004..2550309	-	101	153005102	-	Anae109_2241	-	septum formation initiator
2224	 64.33	-2	2550400..2550870	-	156	153005103	-	Anae109_2242	-	bacterioferritin
2225	 76.83	0	2550940..2551923	+	327	153005104	-	Anae109_2243	-	ApbE family lipoprotein
2226	 78.03	+1	2552165..2552701	-	178	153005105	-	Anae109_2244	-	hypothetical protein
2227	 76.73	0	2552694..2553170	-	158	153005106	-	Anae109_2245	-	hypothetical protein
2228	 73.58	0	2553167..2553730	-	187	153005107	-	Anae109_2246	-	hypothetical protein
2229	 71.22	0	2553748..2555043	-	431	153005108	-	Anae109_2247	-	hypothetical protein
2230	 73.93	0	2555120..2555794	-	224	153005109	-	Anae109_2248	-	iron dependent repressor
2231	 74.56	0	2555803..2556030	-	75	153005110	-	Anae109_2249	-	hypothetical protein
2232	 70.87	0	2556040..2558109	-	689	153005111	-	Anae109_2250	-	small GTP-binding protein
2233	 71.94	0	2558106..2558636	-	176	153005112	-	Anae109_2251	-	ferric uptake regulator family protein
2234	 75.00	0	2558696..2559511	-	271	153005113	-	Anae109_2252	-	heat domain-containing protein
2235	 80.24	+1	2559508..2560944	-	478	153005114	-	Anae109_2253	-	LigA
2236	 74.32	0	2561070..2561435	-	121	153005115	-	Anae109_2254	-	hypothetical protein
2237	 68.03	-1	2561733..2562464	+	243	153005116	-	Anae109_2255	-	TPR repeat-containing protein
2238	 70.29	0	2562501..2562638	-	45	153005117	-	Anae109_2256	-	glutaredoxin
2239	 75.42	0	2563009..2564538	+	509	153005118	-	Anae109_2257	-	response regulator receiver modulated diguanylate cyclase
2240	 69.79	0	2564680..2566086	-	468	153005119	-	Anae109_2258	-	two component, sigma54 specific, Fis family transcriptional regulator
2241	 74.48	0	2566083..2567003	-	306	153005120	-	Anae109_2259	-	histidine kinase
2242	 75.93	0	2567095..2568519	+	474	153005121	-	Anae109_2260	-	putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like protein
2243	 68.08	-1	2568509..2569003	-	164	153005122	-	Anae109_2261	-	CMP/dCMP deaminase zinc-binding
2244	 76.44	0	2569066..2569587	+	173	153005123	-	Anae109_2262	-	cobalamin biosynthesis protein CbiD
2245	 73.59	0	2569724..2570734	-	336	153005124	-	Anae109_2263	-	peptidase S1 and S6 chymotrypsin/Hap
2246	 68.30	-1	2570790..2572319	+	509	153005125	-	Anae109_2264	-	2-alkenal reductase
2247	 77.17	+1	2572345..2573763	-	472	153005126	-	Anae109_2265	-	hypothetical protein
2248	 66.51	-1	2573916..2575196	-	426	153005127	-	Anae109_2266	-	ATP-dependent protease ATP-binding subunit
2249	 76.17	0	2575315..2575935	-	206	153005128	-	Anae109_2267	-	hypothetical protein
2250	 76.57	0	2575932..2576840	-	302	153005129	-	Anae109_2268	-	hypothetical protein
2251	 75.94	0	2576927..2577724	+	265	153005130	-	Anae109_2269	-	tRNA-pseudouridine synthase I
2252	 69.44	-1	2577839..2578054	-	71	153005131	-	Anae109_2270	-	CopG-like DNA-binding protein
2253	 75.20	0	2578186..2579040	-	284	153005132	-	Anae109_2271	-	hypothetical protein
2254	 75.36	0	2579132..2579833	-	233	153005133	-	Anae109_2272	-	adenylylsulfate kinase
2255	 77.83	+1	2580174..2580872	-	232	153005134	-	Anae109_2273	-	UBA/THIF-type NAD/FAD binding protein
2256	 74.16	0	2580949..2581215	-	88	153005135	-	Anae109_2274	-	SirA-like protein
2257	 77.03	+1	2581212..2581964	-	250	153005136	-	Anae109_2275	-	UBA/THIF-type NAD/FAD binding protein
2258	 75.60	0	2582056..2582514	-	152	153005137	-	Anae109_2276	-	hypothetical protein
2259	 68.11	-1	2582601..2583917	+	438	153005138	-	Anae109_2277	-	inositol-3-phosphate synthase
2260	 63.00	-2	2583950..2584276	+	108	153005139	-	Anae109_2278	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
2261	 72.66	0	2584637..2585020	-	127	153005140	-	Anae109_2279	-	preprotein translocase, SecG subunit
2262	 73.10	0	2585017..2585778	-	253	153005141	-	Anae109_2280	-	Triose-phosphate isomerase
2263	 69.77	0	2585782..2586972	-	396	153005142	-	Anae109_2281	-	phosphoglycerate kinase
2264	 66.17	-1	2586980..2587981	-	333	153005143	-	Anae109_2282	-	glyceraldehyde-3-phosphate dehydrogenase, type I
2265	 66.20	-1	2588169..2588381	-	70	153005144	-	Anae109_2283	-	hypothetical protein
2266	 75.44	0	2588606..2590201	+	531	153005145	-	Anae109_2284	-	FAD dependent oxidoreductase
2267	 73.26	0	2590212..2590484	+	90	153005146	-	Anae109_2285	-	hypothetical protein
2268	 67.22	-1	2590579..2590941	-	120	153005147	-	Anae109_2286	-	cupin 2 domain-containing protein
2269	 77.22	+1	2590957..2591610	-	217	153005148	-	Anae109_2287	-	sporulation domain-containing protein
2270	 71.34	0	2591623..2593440	-	605	153005149	-	Anae109_2288	-	arginyl-tRNA synthetase
2271	 79.38	+1	2593528..2594628	-	366	153005150	-	Anae109_2289	-	TPR repeat-containing protein
2272	 71.92	0	2594633..2595127	-	164	153005151	-	Anae109_2290	-	histidine triad (HIT) protein
2273	 72.84	0	2595148..2596248	-	366	153005152	-	Anae109_2291	-	signal peptide peptidase SppA, 36K type
2274	 72.81	0	2596346..2598136	-	596	153005153	-	Anae109_2292	-	citrate transporter
2275	 74.39	0	2598269..2598721	+	150	153005154	-	Anae109_2293	-	putative CheW protein
2276	 76.90	0	2598718..2600124	+	468	153005155	-	Anae109_2294	-	protein-glutamate O-methyltransferase
2277	 80.70	+1	2600163..2600675	+	170	153005156	-	Anae109_2295	-	putative CheW protein
2278	 74.86	0	2600672..2602306	+	544	153005157	-	Anae109_2296	-	methyl-accepting chemotaxis sensory transducer
2279	 77.79	+1	2602310..2604709	+	799	153005158	-	Anae109_2297	-	CheA signal transduction histidine kinase
2280	 73.84	0	2604706..2605722	+	338	153005159	-	Anae109_2298	-	response regulator receiver modulated CheB methylesterase
2281	 74.73	0	2605772..2606242	+	156	153005160	-	Anae109_2299	-	hypothetical protein
2282	 75.38	0	2606211..2606543	+	110	153005161	-	Anae109_2300	-	hypothetical protein
2283	 65.57	-2	2606604..2608340	-	578	153005162	-	Anae109_2301	-	30S ribosomal protein S1
2284	 71.13	0	2608519..2609370	-	283	153005163	-	Anae109_2302	-	hydroxymethylbutenyl pyrophosphate reductase
2285	 74.62	0	2609435..2610214	-	259	153005164	-	Anae109_2303	-	ABC transporter related
2286	 77.07	+1	2610214..2610780	-	188	153005165	-	Anae109_2304	-	hypothetical protein
2287	 74.72	0	2610767..2611399	-	210	153005166	-	Anae109_2305	-	cobalamin (vitamin B12) biosynthesis CbiM protein
2288	 74.22	0	2611402..2611851	-	149	153005167	-	Anae109_2306	-	hypothetical protein
2289	 74.92	0	2612042..2613361	+	439	153005168	-	Anae109_2307	-	putative esterase
2290	 73.33	0	2613358..2614047	-	229	153005169	-	Anae109_2308	-	hypothetical protein
2291	 75.91	0	2614047..2614760	-	237	153005170	-	Anae109_2309	-	cytidylate kinase
2292	 71.51	0	2614757..2615851	-	364	153005171	-	Anae109_2310	-	histidinol-phosphate aminotransferase
2293	 68.83	-1	2615900..2616868	-	322	153005172	-	Anae109_2311	-	acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
2294	 78.52	+1	2616923..2617825	-	300	153005173	-	Anae109_2312	-	tRNA delta(2)-isopentenylpyrophosphate transferase
2295	 72.44	0	2617822..2619069	-	415	153005174	-	Anae109_2313	-	histidyl-tRNA synthetase
2296	 74.56	0	2619096..2619944	-	282	153005175	-	Anae109_2314	-	phosphatidylserine decarboxylase
2297	 73.98	0	2620061..2621701	+	546	153005176	-	Anae109_2315	-	urocanate hydratase
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.