IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2181	 75.93	0	2494145..2494576	+	143	153005060	-	Anae109_2199	-	hypothetical protein
2182	 75.21	0	2494597..2498190	-	1197	153005061	-	Anae109_2200	-	DNA polymerase III, alpha subunit
2183	 79.32	+1	2498267..2499934	-	555	153005062	-	Anae109_2201	-	hypothetical protein
2184	 78.00	+1	2499918..2500658	-	246	153005063	-	Anae109_2202	-	hypothetical protein
2185	 69.86	0	2500825..2501481	+	218	153005064	-	Anae109_2203	-	hypothetical protein
2186	 66.92	-1	2501613..2502008	-	131	153005065	-	Anae109_2204	-	thioredoxin
2187	 72.31	0	2502149..2502697	-	182	153005066	-	Anae109_2205	-	two component Fis family transcriptional regulator
2188	 72.71	0	2502694..2503983	-	429	153005067	-	Anae109_2206	-	histidine kinase
2189	 74.13	0	2504066..2504494	+	142	153005068	-	Anae109_2207	-	hypothetical protein
2190	 79.46	+1	2504495..2506096	+	533	153005069	-	Anae109_2208	-	SCP-like extracellular
2191	 68.89	-1	2506320..2506544	-	74	153005070	-	Anae109_2209	-	hypothetical protein
2192	 79.84	+1	2506822..2508999	+	725	153005071	-	Anae109_2210	-	lytic transglycosylase catalytic
2193	 74.75	0	2509081..2509971	-	296	153005072	-	Anae109_2211	-	3'-5' exonuclease
2194	 79.25	+1	2509983..2510912	-	309	153005073	-	Anae109_2212	-	indigoidine synthase A family protein
2195	 72.14	0	2511003..2511788	+	261	153005074	-	Anae109_2213	-	1-acyl-sn-glycerol-3-phosphate acyltransferase
2196	 75.57	0	2511839..2512321	+	160	153005075	-	Anae109_2214	-	hypothetical protein
2197	 76.98	0	2512324..2512701	+	125	153005076	-	Anae109_2215	-	response regulator receiver protein
2198	 77.70	+1	2513147..2514451	-	434	153005077	-	Anae109_2216	-	FliI/YscN family ATPase
2199	 80.20	+1	2514486..2515091	-	201	153005078	-	Anae109_2217	-	flagellar assembly protein FliH, putative
2200	 68.31	-1	2515140..2515565	-	141	153005079	-	Anae109_2218	-	CopG family transcriptional regulator
2201	 69.83	0	2515669..2516394	-	241	153005080	-	Anae109_2219	-	RNA polymerase, sigma 32 subunit, RpoH
2202	 66.88	-1	2516822..2521009	-	1395	153005081	-	Anae109_2220	-	DNA-directed RNA polymerase, beta' subunit
2203	 66.01	-1	2521127..2525377	-	1416	153005082	-	Anae109_2221	-	DNA-directed RNA polymerase subunit beta
2204	 67.46	-1	2525593..2525970	-	125	153005083	-	Anae109_2222	-	ribosomal protein L7/L12
2205	 68.00	-1	2526060..2526584	-	174	153005084	-	Anae109_2223	-	ribosomal protein L10
2206	 67.09	-1	2526856..2527560	-	234	153005085	-	Anae109_2224	-	50S ribosomal protein L1
2207	 66.22	-1	2527580..2528026	-	148	153005086	-	Anae109_2225	-	50S ribosomal protein L11
2208	 62.78	-2	2528132..2528671	-	179	153005087	-	Anae109_2226	-	NusG antitermination factor
2209	 67.94	-1	2528793..2529185	-	130	153005088	-	Anae109_2227	-	preprotein translocase, SecE subunit
2210	 57.86	-2	2529400..2529558	-	52	153005089	-	Anae109_2228	-	ribosomal protein L33
2211	 67.51	-1	2529571..2530761	-	396	153005090	-	Anae109_2229	-	elongation factor Tu
2212	 75.47	0	2531402..2532139	-	245	153005091	-	Anae109_2230	-	RNA methyltransferase
2213	 69.27	-1	2532195..2532617	-	140	153005092	-	Anae109_2231	-	hypothetical protein
2214	 74.67	0	2532842..2533816	-	324	153005093	-	Anae109_2232	-	alpha-L-glutamate ligase
2215	 67.20	-1	2534032..2535921	-	629	153005094	-	Anae109_2233	-	chaperone protein DnaK
2216	 74.06	0	2536103..2537251	+	382	153005095	-	Anae109_2234	-	diacylglycerol kinase catalytic region
2217	 73.50	0	2537273..2539423	-	716	153005096	-	Anae109_2235	-	multi-sensor signal transduction histidine kinase
2218	 68.14	-1	2539562..2545204	-	1880	153005097	-	Anae109_2236	-	hypothetical protein
2219	 76.24	0	2545228..2545833	+	201	153005098	-	Anae109_2237	-	hypothetical protein
2220	 70.14	0	2545858..2546145	-	95	153005099	-	Anae109_2238	-	hypothetical protein
2221	 66.37	-1	2546312..2547637	-	441	153005100	-	Anae109_2239	-	PhoH family protein
2222	 75.58	0	2547731..2550007	-	758	153005101	-	Anae109_2240	-	diguanylate cyclase
2223	 76.80	0	2550004..2550309	-	101	153005102	-	Anae109_2241	-	septum formation initiator
2224	 64.33	-2	2550400..2550870	-	156	153005103	-	Anae109_2242	-	bacterioferritin
2225	 76.83	0	2550940..2551923	+	327	153005104	-	Anae109_2243	-	ApbE family lipoprotein
2226	 78.03	+1	2552165..2552701	-	178	153005105	-	Anae109_2244	-	hypothetical protein
2227	 76.73	0	2552694..2553170	-	158	153005106	-	Anae109_2245	-	hypothetical protein
2228	 73.58	0	2553167..2553730	-	187	153005107	-	Anae109_2246	-	hypothetical protein
2229	 71.22	0	2553748..2555043	-	431	153005108	-	Anae109_2247	-	hypothetical protein
2230	 73.93	0	2555120..2555794	-	224	153005109	-	Anae109_2248	-	iron dependent repressor
2231	 74.56	0	2555803..2556030	-	75	153005110	-	Anae109_2249	-	hypothetical protein
2232	 70.87	0	2556040..2558109	-	689	153005111	-	Anae109_2250	-	small GTP-binding protein
2233	 71.94	0	2558106..2558636	-	176	153005112	-	Anae109_2251	-	ferric uptake regulator family protein
2234	 75.00	0	2558696..2559511	-	271	153005113	-	Anae109_2252	-	heat domain-containing protein
2235	 80.24	+1	2559508..2560944	-	478	153005114	-	Anae109_2253	-	LigA
2236	 74.32	0	2561070..2561435	-	121	153005115	-	Anae109_2254	-	hypothetical protein
2237	 68.03	-1	2561733..2562464	+	243	153005116	-	Anae109_2255	-	TPR repeat-containing protein
2238	 70.29	0	2562501..2562638	-	45	153005117	-	Anae109_2256	-	glutaredoxin
2239	 75.42	0	2563009..2564538	+	509	153005118	-	Anae109_2257	-	response regulator receiver modulated diguanylate cyclase
2240	 69.79	0	2564680..2566086	-	468	153005119	-	Anae109_2258	-	two component, sigma54 specific, Fis family transcriptional regulator
2241	 74.48	0	2566083..2567003	-	306	153005120	-	Anae109_2259	-	histidine kinase
2242	 75.93	0	2567095..2568519	+	474	153005121	-	Anae109_2260	-	putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like protein
2243	 68.08	-1	2568509..2569003	-	164	153005122	-	Anae109_2261	-	CMP/dCMP deaminase zinc-binding
2244	 76.44	0	2569066..2569587	+	173	153005123	-	Anae109_2262	-	cobalamin biosynthesis protein CbiD
2245	 73.59	0	2569724..2570734	-	336	153005124	-	Anae109_2263	-	peptidase S1 and S6 chymotrypsin/Hap
2246	 68.30	-1	2570790..2572319	+	509	153005125	-	Anae109_2264	-	2-alkenal reductase
2247	 77.17	+1	2572345..2573763	-	472	153005126	-	Anae109_2265	-	hypothetical protein
2248	 66.51	-1	2573916..2575196	-	426	153005127	-	Anae109_2266	-	ATP-dependent protease ATP-binding subunit
2249	 76.17	0	2575315..2575935	-	206	153005128	-	Anae109_2267	-	hypothetical protein
2250	 76.57	0	2575932..2576840	-	302	153005129	-	Anae109_2268	-	hypothetical protein
2251	 75.94	0	2576927..2577724	+	265	153005130	-	Anae109_2269	-	tRNA-pseudouridine synthase I
2252	 69.44	-1	2577839..2578054	-	71	153005131	-	Anae109_2270	-	CopG-like DNA-binding protein
2253	 75.20	0	2578186..2579040	-	284	153005132	-	Anae109_2271	-	hypothetical protein
2254	 75.36	0	2579132..2579833	-	233	153005133	-	Anae109_2272	-	adenylylsulfate kinase
2255	 77.83	+1	2580174..2580872	-	232	153005134	-	Anae109_2273	-	UBA/THIF-type NAD/FAD binding protein
2256	 74.16	0	2580949..2581215	-	88	153005135	-	Anae109_2274	-	SirA-like protein
2257	 77.03	+1	2581212..2581964	-	250	153005136	-	Anae109_2275	-	UBA/THIF-type NAD/FAD binding protein
2258	 75.60	0	2582056..2582514	-	152	153005137	-	Anae109_2276	-	hypothetical protein
2259	 68.11	-1	2582601..2583917	+	438	153005138	-	Anae109_2277	-	inositol-3-phosphate synthase
2260	 63.00	-2	2583950..2584276	+	108	153005139	-	Anae109_2278	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
2261	 72.66	0	2584637..2585020	-	127	153005140	-	Anae109_2279	-	preprotein translocase, SecG subunit
2262	 73.10	0	2585017..2585778	-	253	153005141	-	Anae109_2280	-	Triose-phosphate isomerase
2263	 69.77	0	2585782..2586972	-	396	153005142	-	Anae109_2281	-	phosphoglycerate kinase
2264	 66.17	-1	2586980..2587981	-	333	153005143	-	Anae109_2282	-	glyceraldehyde-3-phosphate dehydrogenase, type I
2265	 66.20	-1	2588169..2588381	-	70	153005144	-	Anae109_2283	-	hypothetical protein
2266	 75.44	0	2588606..2590201	+	531	153005145	-	Anae109_2284	-	FAD dependent oxidoreductase
2267	 73.26	0	2590212..2590484	+	90	153005146	-	Anae109_2285	-	hypothetical protein
2268	 67.22	-1	2590579..2590941	-	120	153005147	-	Anae109_2286	-	cupin 2 domain-containing protein
2269	 77.22	+1	2590957..2591610	-	217	153005148	-	Anae109_2287	-	sporulation domain-containing protein
2270	 71.34	0	2591623..2593440	-	605	153005149	-	Anae109_2288	-	arginyl-tRNA synthetase
2271	 79.38	+1	2593528..2594628	-	366	153005150	-	Anae109_2289	-	TPR repeat-containing protein
2272	 71.92	0	2594633..2595127	-	164	153005151	-	Anae109_2290	-	histidine triad (HIT) protein
2273	 72.84	0	2595148..2596248	-	366	153005152	-	Anae109_2291	-	signal peptide peptidase SppA, 36K type
2274	 72.81	0	2596346..2598136	-	596	153005153	-	Anae109_2292	-	citrate transporter
2275	 74.39	0	2598269..2598721	+	150	153005154	-	Anae109_2293	-	putative CheW protein
2276	 76.90	0	2598718..2600124	+	468	153005155	-	Anae109_2294	-	protein-glutamate O-methyltransferase
2277	 80.70	+1	2600163..2600675	+	170	153005156	-	Anae109_2295	-	putative CheW protein
2278	 74.86	0	2600672..2602306	+	544	153005157	-	Anae109_2296	-	methyl-accepting chemotaxis sensory transducer
2279	 77.79	+1	2602310..2604709	+	799	153005158	-	Anae109_2297	-	CheA signal transduction histidine kinase
2280	 73.84	0	2604706..2605722	+	338	153005159	-	Anae109_2298	-	response regulator receiver modulated CheB methylesterase
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.