IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2105	 78.31	+1	2406234..2407298	+	354	153004984	-	Anae109_2122	-	pseudouridine synthase
2106	 82.97	+2	2407362..2409269	+	635	153004985	-	Anae109_2123	-	HEAT repeat-containing PBS lyase
2107	 76.27	0	2409266..2410993	-	575	153004986	-	Anae109_2124	-	secretin/TonB short domain
2108	 77.46	+1	2411004..2411531	-	175	153004987	-	Anae109_2125	-	putative transmembrane anti-sigma factor
2109	 74.27	0	2411528..2412106	-	192	153004988	-	Anae109_2126	-	ECF subfamily RNA polymerase sigma-24 factor
2110	 74.62	0	2412306..2413562	-	418	153004989	-	Anae109_2127	-	citrate transporter
2111	 76.09	0	2413641..2414765	+	374	153004990	-	Anae109_2128	-	RNA-3'-phosphate cyclase
2112	 72.78	0	2414775..2415722	-	315	153004991	-	Anae109_2129	-	Mg2 transporter protein CorA family protein
2113	 71.82	0	2416272..2417357	+	361	153004992	-	Anae109_2130	-	hypothetical protein
2114	 73.29	0	2417368..2417820	+	150	153004993	-	Anae109_2131	-	hypothetical protein
2115	 77.58	+1	2417817..2418155	+	112	153004994	-	Anae109_2132	-	hypothetical protein
2116	 73.26	0	2418209..2418769	+	186	153004995	-	Anae109_2133	-	dual specificity protein phosphatase
2117	 70.88	0	2418928..2419782	+	284	153004996	-	Anae109_2134	-	3-hydroxybutyryl-CoA dehydrogenase
2118	 72.92	0	2419816..2420598	+	260	153004997	-	Anae109_2135	-	enoyl-CoA hydratase/isomerase
2119	 69.20	-1	2420752..2421894	+	380	153004998	-	Anae109_2136	-	acyl-CoA dehydrogenase domain-containing protein
2120	 75.02	0	2421912..2423060	+	382	153004999	-	Anae109_2137	-	acyl-CoA dehydrogenase domain-containing protein
2121	 72.31	0	2423057..2426974	+	1305	153005000	-	Anae109_2138	-	putative phosphoketolase
2122	 72.15	0	2427648..2428304	-	218	153005001	-	Anae109_2140	-	GTP cyclohydrolase II
2123	 73.63	0	2428466..2429011	+	181	153005002	-	Anae109_2141	-	MerR family transcriptional regulator
2124	 74.22	0	2429287..2430795	+	502	153005003	-	Anae109_2142	-	histidine kinase
2125	 70.40	0	2430792..2431112	-	106	153005004	-	Anae109_2143	-	hypothetical protein
2126	 79.94	+1	2431314..2434334	-	1006	153005005	-	Anae109_2144	-	DNA repair exonuclease, SbcC
2127	 74.76	0	2434516..2435676	-	386	153005006	-	Anae109_2145	-	nuclease SbcCD, D subunit
2128	 73.33	0	2436353..2437597	+	414	153005007	-	Anae109_2146	-	hypothetical protein
2129	 76.70	0	2437888..2438445	-	185	153005008	-	Anae109_2147	-	alkylhydroperoxidase
2130	 71.48	0	2438442..2438981	-	179	153005009	-	Anae109_2148	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
2131	 79.11	+1	2439097..2440020	+	307	153005010	-	Anae109_2149	-	LysR family transcriptional regulator
2132	 76.44	0	2440052..2440951	-	299	153005011	-	Anae109_2150	-	NmrA family protein
2133	 79.17	+1	2441093..2441764	+	223	153005012	-	Anae109_2151	-	hypothetical protein
2134	 76.15	0	2441786..2442175	-	129	153005013	-	Anae109_2152	-	NUDIX hydrolase
2135	 76.41	0	2442177..2443274	-	365	153005014	-	Anae109_2153	-	Pyrrolo-quinoline quinone
2136	 75.58	0	2443275..2444003	-	242	153005015	-	Anae109_2154	-	hypothetical protein
2137	 72.53	0	2444101..2445516	-	471	153005016	-	Anae109_2155	-	small GTP-binding protein
2138	 71.49	0	2445513..2446445	-	310	153005017	-	Anae109_2156	-	GTP-binding protein Era
2139	 66.86	-1	2446539..2447045	-	168	153005018	-	Anae109_2157	-	peptidylprolyl isomerase
2140	 72.30	0	2447097..2447753	-	218	153005019	-	Anae109_2158	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
2141	 77.07	+1	2447824..2448957	-	377	153005020	-	Anae109_2159	-	ribonuclease III
2142	 75.34	0	2448966..2449991	-	341	153005021	-	Anae109_2160	-	LAO/AO transport system ATPase
2143	 76.14	0	2449991..2451310	-	439	153005022	-	Anae109_2161	-	hypothetical protein
2144	 74.77	0	2451433..2451987	-	184	153005023	-	Anae109_2162	-	maltose O-acetyltransferase
2145	 72.74	0	2452101..2453270	-	389	153005024	-	Anae109_2163	-	acyl-CoA dehydrogenase domain-containing protein
2146	 72.08	0	2453362..2454930	-	522	153005025	-	Anae109_2164	-	propionyl-CoA carboxylase
2147	 76.32	0	2454962..2455738	-	258	153005026	-	Anae109_2165	-	enoyl-CoA hydratase/isomerase
2148	 76.48	0	2455799..2456746	-	315	153005027	-	Anae109_2166	-	pyruvate carboxyltransferase
2149	 72.14	0	2456823..2458229	-	468	153005028	-	Anae109_2167	-	thiamine biosynthesis protein ThiC
2150	 70.23	0	2458476..2459765	-	429	153005029	-	Anae109_2168	-	phosphopyruvate hydratase
2151	 69.17	-1	2459840..2460478	+	212	153005030	-	Anae109_2169	-	hypothetical protein
2152	 69.35	-1	2460450..2460896	-	148	153005031	-	Anae109_2170	-	cyclase/dehydrase
2153	 73.08	0	2460957..2461922	-	321	153005032	-	Anae109_2171	-	fructose 1,6-bisphosphatase II
2154	 70.29	0	2461935..2462348	-	137	153005033	-	Anae109_2172	-	thioesterase superfamily protein
2155	 74.13	0	2462437..2463762	-	441	153005034	-	Anae109_2173	-	homoserine dehydrogenase
2156	 74.53	0	2463762..2464346	-	194	153005035	-	Anae109_2174	-	hypothetical protein
2157	 77.19	+1	2464343..2465254	-	303	153005036	-	Anae109_2175	-	HEAT repeat-containing PBS lyase
2158	 76.72	0	2465261..2467270	-	669	153005037	-	Anae109_2176	-	restriction endonuclease
2159	 80.40	+1	2467407..2469656	+	749	153005038	-	Anae109_2177	-	Pyrrolo-quinoline quinone
2160	 69.39	-1	2469844..2470578	-	244	153005039	-	Anae109_2178	-	metallophosphoesterase
2161	 70.38	0	2470633..2471574	-	313	153005040	-	Anae109_2179	-	ribokinase-like domain-containing protein
2162	 73.28	0	2471617..2472750	-	377	153005041	-	Anae109_2180	-	radical SAM protein
2163	 71.87	0	2472763..2474127	-	454	153005042	-	Anae109_2181	-	hypothetical protein
2164	 64.63	-2	2474266..2474706	-	146	153005043	-	Anae109_2182	-	nucleoside-diphosphate kinase
2165	 72.75	0	2474744..2475763	-	339	153005044	-	Anae109_2183	-	succinyl-CoA synthetase, alpha subunit
2166	 70.88	0	2475987..2477150	-	387	153005045	-	Anae109_2184	-	succinyl-CoA synthetase, beta subunit
2167	 68.58	-1	2477495..2478433	-	312	153005046	-	Anae109_2185	-	malate dehydrogenase, NAD-dependent
2168	 66.82	-1	2478470..2479783	-	437	153005047	-	Anae109_2186	-	isocitrate dehydrogenase, NADP-dependent
2169	 75.65	0	2479906..2480640	-	244	153005048	-	Anae109_2187	-	YdjC family protein
2170	 75.28	0	2480669..2481910	-	413	153005049	-	Anae109_2188	-	PAS/PAC sensor signal transduction histidine kinase
2171	 78.44	+1	2481949..2482500	+	183	153005050	-	Anae109_2189	-	hypothetical protein
2172	 71.47	0	2482537..2483223	-	228	153005051	-	Anae109_2190	-	hypothetical protein
2173	 71.22	0	2483220..2484338	-	372	153005052	-	Anae109_2191	-	carbamoyl phosphate synthase small subunit
2174	 74.35	0	2484335..2485636	-	433	153005053	-	Anae109_2192	-	dihydroorotase, multifunctional complex type
2175	 71.40	0	2485676..2486626	-	316	153005054	-	Anae109_2193	-	aspartate carbamoyltransferase catalytic subunit
2176	 74.54	0	2486623..2487168	-	181	153005055	-	Anae109_2194	-	phosphoribosyltransferase
2177	 73.80	0	2487168..2487686	-	172	153005056	-	Anae109_2195	-	hypothetical protein
2178	 76.25	0	2487707..2488729	-	340	153005057	-	Anae109_2196	-	signal peptidase I
2179	 67.05	-1	2488737..2490542	-	601	153005058	-	Anae109_2197	-	GTP-binding protein LepA
2180	 69.14	-1	2491124..2493913	+	929	153005059	-	Anae109_2198	-	vitamin B12-dependent ribonucleotide reductase
2181	 75.93	0	2494145..2494576	+	143	153005060	-	Anae109_2199	-	hypothetical protein
2182	 75.21	0	2494597..2498190	-	1197	153005061	-	Anae109_2200	-	DNA polymerase III, alpha subunit
2183	 79.32	+1	2498267..2499934	-	555	153005062	-	Anae109_2201	-	hypothetical protein
2184	 78.00	+1	2499918..2500658	-	246	153005063	-	Anae109_2202	-	hypothetical protein
2185	 69.86	0	2500825..2501481	+	218	153005064	-	Anae109_2203	-	hypothetical protein
2186	 66.92	-1	2501613..2502008	-	131	153005065	-	Anae109_2204	-	thioredoxin
2187	 72.31	0	2502149..2502697	-	182	153005066	-	Anae109_2205	-	two component Fis family transcriptional regulator
2188	 72.71	0	2502694..2503983	-	429	153005067	-	Anae109_2206	-	histidine kinase
2189	 74.13	0	2504066..2504494	+	142	153005068	-	Anae109_2207	-	hypothetical protein
2190	 79.46	+1	2504495..2506096	+	533	153005069	-	Anae109_2208	-	SCP-like extracellular
2191	 68.89	-1	2506320..2506544	-	74	153005070	-	Anae109_2209	-	hypothetical protein
2192	 79.84	+1	2506822..2508999	+	725	153005071	-	Anae109_2210	-	lytic transglycosylase catalytic
2193	 74.75	0	2509081..2509971	-	296	153005072	-	Anae109_2211	-	3'-5' exonuclease
2194	 79.25	+1	2509983..2510912	-	309	153005073	-	Anae109_2212	-	indigoidine synthase A family protein
2195	 72.14	0	2511003..2511788	+	261	153005074	-	Anae109_2213	-	1-acyl-sn-glycerol-3-phosphate acyltransferase
2196	 75.57	0	2511839..2512321	+	160	153005075	-	Anae109_2214	-	hypothetical protein
2197	 76.98	0	2512324..2512701	+	125	153005076	-	Anae109_2215	-	response regulator receiver protein
2198	 77.70	+1	2513147..2514451	-	434	153005077	-	Anae109_2216	-	FliI/YscN family ATPase
2199	 80.20	+1	2514486..2515091	-	201	153005078	-	Anae109_2217	-	flagellar assembly protein FliH, putative
2200	 68.31	-1	2515140..2515565	-	141	153005079	-	Anae109_2218	-	CopG family transcriptional regulator
2201	 69.83	0	2515669..2516394	-	241	153005080	-	Anae109_2219	-	RNA polymerase, sigma 32 subunit, RpoH
2202	 66.88	-1	2516822..2521009	-	1395	153005081	-	Anae109_2220	-	DNA-directed RNA polymerase, beta' subunit
2203	 66.01	-1	2521127..2525377	-	1416	153005082	-	Anae109_2221	-	DNA-directed RNA polymerase subunit beta
2204	 67.46	-1	2525593..2525970	-	125	153005083	-	Anae109_2222	-	ribosomal protein L7/L12
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.