IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2077	 78.17	+1	2373118..2375082	-	654	153004956	-	Anae109_2094	-	protein kinase
2078	 78.61	+1	2375236..2376357	-	373	153004957	-	Anae109_2095	-	NAD-dependent epimerase/dehydratase
2079	 70.29	0	2376524..2377516	-	330	153004958	-	Anae109_2096	-	aldo/keto reductase
2080	 72.54	0	2377814..2378290	+	158	153004959	-	Anae109_2097	-	TetR family transcriptional regulator
2081	 68.07	-1	2378459..2380945	-	828	153004960	-	Anae109_2098	-	ATP-dependent protease La
2082	 80.98	+2	2381363..2382466	+	367	153004961	-	Anae109_2099	-	hypothetical protein
2083	 75.30	0	2382683..2383354	+	223	153004962	-	Anae109_2100	-	metallophosphoesterase
2084	 74.59	0	2383360..2384280	+	306	153004963	-	Anae109_2101	-	hypothetical protein
2085	 78.06	+1	2384289..2385605	+	438	153004964	-	Anae109_2102	-	hypothetical protein
2086	 74.34	0	2385657..2385995	-	112	153004965	-	Anae109_2103	-	hypothetical protein
2087	 69.54	0	2386087..2386782	-	231	153004966	-	Anae109_2104	-	SOS-response transcriptional repressor, LexA
2088	 80.20	+1	2386897..2387805	+	302	153004967	-	Anae109_2105	-	hypothetical protein
2089	 71.01	0	2387818..2389497	-	559	153004968	-	Anae109_2106	-	hypothetical protein
2090	 75.31	0	2389603..2392251	+	882	153004969	-	Anae109_2107	-	DNA mismatch repair protein MutS
2091	 69.15	-1	2392499..2392780	-	93	153004970	-	Anae109_2108	-	cytochrome c class III
2092	 66.67	-1	2392982..2393260	-	92	153004971	-	Anae109_2109	-	cytochrome c, class III
2093	 71.47	0	2393415..2394080	-	221	153004972	-	Anae109_2110	-	isoprenoid biosynthesis protein with amidotransferase-like domain
2094	 76.80	0	2394211..2396016	+	601	153004973	-	Anae109_2111	-	N-acetylmuramoyl-L-alanine amidase
2095	 74.71	0	2396080..2398863	+	927	153004974	-	Anae109_2112	-	metal dependent phosphohydrolase
2096	 72.73	0	2399007..2400029	+	340	153004975	-	Anae109_2113	-	alpha-L-glutamate ligase
2097	 68.19	-1	2400022..2400414	+	130	153004976	-	Anae109_2114	-	hypothetical protein
2098	 71.28	0	2400448..2400642	+	64	153004977	-	Anae109_2115	-	hypothetical protein
2099	 69.63	0	2400723..2401430	+	235	153004978	-	Anae109_2116	-	Sua5/YciO/YrdC/YwlC family protein
2100	 74.25	0	2401520..2402416	+	298	153004979	-	Anae109_2117	-	tyrosine recombinase XerD
2101	 69.26	-1	2402630..2403247	+	205	153004980	-	Anae109_2118	-	peptidase M50
2102	 68.57	-1	2403254..2404252	+	332	153004981	-	Anae109_2119	-	tryptophanyl-tRNA synthetase
2103	 72.43	0	2404277..2405179	+	300	153004982	-	Anae109_2120	-	chromosome segregation and condensation protein ScpA
2104	 72.71	0	2405176..2406234	+	352	153004983	-	Anae109_2121	-	putative transcriptional regulator
2105	 78.31	+1	2406234..2407298	+	354	153004984	-	Anae109_2122	-	pseudouridine synthase
2106	 82.97	+2	2407362..2409269	+	635	153004985	-	Anae109_2123	-	HEAT repeat-containing PBS lyase
2107	 76.27	0	2409266..2410993	-	575	153004986	-	Anae109_2124	-	secretin/TonB short domain
2108	 77.46	+1	2411004..2411531	-	175	153004987	-	Anae109_2125	-	putative transmembrane anti-sigma factor
2109	 74.27	0	2411528..2412106	-	192	153004988	-	Anae109_2126	-	ECF subfamily RNA polymerase sigma-24 factor
2110	 74.62	0	2412306..2413562	-	418	153004989	-	Anae109_2127	-	citrate transporter
2111	 76.09	0	2413641..2414765	+	374	153004990	-	Anae109_2128	-	RNA-3'-phosphate cyclase
2112	 72.78	0	2414775..2415722	-	315	153004991	-	Anae109_2129	-	Mg2 transporter protein CorA family protein
2113	 71.82	0	2416272..2417357	+	361	153004992	-	Anae109_2130	-	hypothetical protein
2114	 73.29	0	2417368..2417820	+	150	153004993	-	Anae109_2131	-	hypothetical protein
2115	 77.58	+1	2417817..2418155	+	112	153004994	-	Anae109_2132	-	hypothetical protein
2116	 73.26	0	2418209..2418769	+	186	153004995	-	Anae109_2133	-	dual specificity protein phosphatase
2117	 70.88	0	2418928..2419782	+	284	153004996	-	Anae109_2134	-	3-hydroxybutyryl-CoA dehydrogenase
2118	 72.92	0	2419816..2420598	+	260	153004997	-	Anae109_2135	-	enoyl-CoA hydratase/isomerase
2119	 69.20	-1	2420752..2421894	+	380	153004998	-	Anae109_2136	-	acyl-CoA dehydrogenase domain-containing protein
2120	 75.02	0	2421912..2423060	+	382	153004999	-	Anae109_2137	-	acyl-CoA dehydrogenase domain-containing protein
2121	 72.31	0	2423057..2426974	+	1305	153005000	-	Anae109_2138	-	putative phosphoketolase
2122	 72.15	0	2427648..2428304	-	218	153005001	-	Anae109_2140	-	GTP cyclohydrolase II
2123	 73.63	0	2428466..2429011	+	181	153005002	-	Anae109_2141	-	MerR family transcriptional regulator
2124	 74.22	0	2429287..2430795	+	502	153005003	-	Anae109_2142	-	histidine kinase
2125	 70.40	0	2430792..2431112	-	106	153005004	-	Anae109_2143	-	hypothetical protein
2126	 79.94	+1	2431314..2434334	-	1006	153005005	-	Anae109_2144	-	DNA repair exonuclease, SbcC
2127	 74.76	0	2434516..2435676	-	386	153005006	-	Anae109_2145	-	nuclease SbcCD, D subunit
2128	 73.33	0	2436353..2437597	+	414	153005007	-	Anae109_2146	-	hypothetical protein
2129	 76.70	0	2437888..2438445	-	185	153005008	-	Anae109_2147	-	alkylhydroperoxidase
2130	 71.48	0	2438442..2438981	-	179	153005009	-	Anae109_2148	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
2131	 79.11	+1	2439097..2440020	+	307	153005010	-	Anae109_2149	-	LysR family transcriptional regulator
2132	 76.44	0	2440052..2440951	-	299	153005011	-	Anae109_2150	-	NmrA family protein
2133	 79.17	+1	2441093..2441764	+	223	153005012	-	Anae109_2151	-	hypothetical protein
2134	 76.15	0	2441786..2442175	-	129	153005013	-	Anae109_2152	-	NUDIX hydrolase
2135	 76.41	0	2442177..2443274	-	365	153005014	-	Anae109_2153	-	Pyrrolo-quinoline quinone
2136	 75.58	0	2443275..2444003	-	242	153005015	-	Anae109_2154	-	hypothetical protein
2137	 72.53	0	2444101..2445516	-	471	153005016	-	Anae109_2155	-	small GTP-binding protein
2138	 71.49	0	2445513..2446445	-	310	153005017	-	Anae109_2156	-	GTP-binding protein Era
2139	 66.86	-1	2446539..2447045	-	168	153005018	-	Anae109_2157	-	peptidylprolyl isomerase
2140	 72.30	0	2447097..2447753	-	218	153005019	-	Anae109_2158	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
2141	 77.07	+1	2447824..2448957	-	377	153005020	-	Anae109_2159	-	ribonuclease III
2142	 75.34	0	2448966..2449991	-	341	153005021	-	Anae109_2160	-	LAO/AO transport system ATPase
2143	 76.14	0	2449991..2451310	-	439	153005022	-	Anae109_2161	-	hypothetical protein
2144	 74.77	0	2451433..2451987	-	184	153005023	-	Anae109_2162	-	maltose O-acetyltransferase
2145	 72.74	0	2452101..2453270	-	389	153005024	-	Anae109_2163	-	acyl-CoA dehydrogenase domain-containing protein
2146	 72.08	0	2453362..2454930	-	522	153005025	-	Anae109_2164	-	propionyl-CoA carboxylase
2147	 76.32	0	2454962..2455738	-	258	153005026	-	Anae109_2165	-	enoyl-CoA hydratase/isomerase
2148	 76.48	0	2455799..2456746	-	315	153005027	-	Anae109_2166	-	pyruvate carboxyltransferase
2149	 72.14	0	2456823..2458229	-	468	153005028	-	Anae109_2167	-	thiamine biosynthesis protein ThiC
2150	 70.23	0	2458476..2459765	-	429	153005029	-	Anae109_2168	-	phosphopyruvate hydratase
2151	 69.17	-1	2459840..2460478	+	212	153005030	-	Anae109_2169	-	hypothetical protein
2152	 69.35	-1	2460450..2460896	-	148	153005031	-	Anae109_2170	-	cyclase/dehydrase
2153	 73.08	0	2460957..2461922	-	321	153005032	-	Anae109_2171	-	fructose 1,6-bisphosphatase II
2154	 70.29	0	2461935..2462348	-	137	153005033	-	Anae109_2172	-	thioesterase superfamily protein
2155	 74.13	0	2462437..2463762	-	441	153005034	-	Anae109_2173	-	homoserine dehydrogenase
2156	 74.53	0	2463762..2464346	-	194	153005035	-	Anae109_2174	-	hypothetical protein
2157	 77.19	+1	2464343..2465254	-	303	153005036	-	Anae109_2175	-	HEAT repeat-containing PBS lyase
2158	 76.72	0	2465261..2467270	-	669	153005037	-	Anae109_2176	-	restriction endonuclease
2159	 80.40	+1	2467407..2469656	+	749	153005038	-	Anae109_2177	-	Pyrrolo-quinoline quinone
2160	 69.39	-1	2469844..2470578	-	244	153005039	-	Anae109_2178	-	metallophosphoesterase
2161	 70.38	0	2470633..2471574	-	313	153005040	-	Anae109_2179	-	ribokinase-like domain-containing protein
2162	 73.28	0	2471617..2472750	-	377	153005041	-	Anae109_2180	-	radical SAM protein
2163	 71.87	0	2472763..2474127	-	454	153005042	-	Anae109_2181	-	hypothetical protein
2164	 64.63	-2	2474266..2474706	-	146	153005043	-	Anae109_2182	-	nucleoside-diphosphate kinase
2165	 72.75	0	2474744..2475763	-	339	153005044	-	Anae109_2183	-	succinyl-CoA synthetase, alpha subunit
2166	 70.88	0	2475987..2477150	-	387	153005045	-	Anae109_2184	-	succinyl-CoA synthetase, beta subunit
2167	 68.58	-1	2477495..2478433	-	312	153005046	-	Anae109_2185	-	malate dehydrogenase, NAD-dependent
2168	 66.82	-1	2478470..2479783	-	437	153005047	-	Anae109_2186	-	isocitrate dehydrogenase, NADP-dependent
2169	 75.65	0	2479906..2480640	-	244	153005048	-	Anae109_2187	-	YdjC family protein
2170	 75.28	0	2480669..2481910	-	413	153005049	-	Anae109_2188	-	PAS/PAC sensor signal transduction histidine kinase
2171	 78.44	+1	2481949..2482500	+	183	153005050	-	Anae109_2189	-	hypothetical protein
2172	 71.47	0	2482537..2483223	-	228	153005051	-	Anae109_2190	-	hypothetical protein
2173	 71.22	0	2483220..2484338	-	372	153005052	-	Anae109_2191	-	carbamoyl phosphate synthase small subunit
2174	 74.35	0	2484335..2485636	-	433	153005053	-	Anae109_2192	-	dihydroorotase, multifunctional complex type
2175	 71.40	0	2485676..2486626	-	316	153005054	-	Anae109_2193	-	aspartate carbamoyltransferase catalytic subunit
2176	 74.54	0	2486623..2487168	-	181	153005055	-	Anae109_2194	-	phosphoribosyltransferase
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.