IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1906	 63.72	-2	2189852..2190394	+	180	153004785	-	Anae109_1923	-	50S ribosomal protein L5
1907	 64.52	-2	2190406..2190591	+	61	153004786	-	Anae109_1924	-	ribosomal protein S14
1908	 66.67	-1	2190604..2191002	+	132	153004787	-	Anae109_1925	-	ribosomal protein S8
1909	 66.67	-1	2191016..2191558	+	180	153004788	-	Anae109_1926	-	ribosomal protein L6
1910	 69.44	-1	2191619..2191978	+	119	153004789	-	Anae109_1927	-	ribosomal protein L18
1911	 71.60	0	2191990..2192496	+	168	153004790	-	Anae109_1928	-	ribosomal protein S5
1912	 70.83	0	2192506..2192745	+	79	153004791	-	Anae109_1929	-	50S ribosomal protein L30
1913	 71.92	0	2192782..2193276	+	164	153004792	-	Anae109_1930	-	50S ribosomal protein L15
1914	 66.82	-1	2193349..2194686	+	445	153004793	-	Anae109_1931	-	preprotein translocase subunit SecY
1915	 71.16	0	2194739..2195383	+	214	153004794	-	Anae109_1932	-	adenylate kinase
1916	 76.17	0	2195407..2196216	+	269	153004795	-	Anae109_1933	-	methionine aminopeptidase, type I
1917	 62.39	-2	2196439..2196555	+	38	153004796	-	Anae109_1934	-	ribosomal protein L36
1918	 69.27	-1	2196582..2196965	+	127	153004797	-	Anae109_1935	-	30S ribosomal protein S13
1919	 70.62	0	2196996..2197475	+	159	153004798	-	Anae109_1936	-	30S ribosomal protein S11
1920	 67.46	-1	2197493..2198119	+	208	153004799	-	Anae109_1937	-	30S ribosomal protein S4
1921	 65.20	-2	2198367..2199386	+	339	153004800	-	Anae109_1938	-	DNA-directed RNA polymerase subunit alpha
1922	 69.63	0	2199416..2199922	+	168	153004801	-	Anae109_1939	-	ribosomal protein L17
1923	 79.49	+1	2200044..2200667	+	207	153004802	-	Anae109_1940	-	phosphoesterase PA-phosphatase related
1924	 67.04	-1	2200772..2201038	+	88	153004803	-	Anae109_1941	-	ribosomal protein S16
1925	 73.59	0	2201046..2201276	+	76	153004804	-	Anae109_1942	-	hypothetical protein
1926	 75.30	0	2201278..2201775	+	165	153004805	-	Anae109_1943	-	16S rRNA processing protein RimM
1927	 73.49	0	2201855..2202601	+	248	153004806	-	Anae109_1944	-	tRNA (guanine-N1)-methyltransferase
1928	 71.11	0	2202617..2203021	+	134	153004807	-	Anae109_1945	-	50S ribosomal protein L19
1929	 80.00	+1	2203340..2205139	+	599	153004808	-	Anae109_1946	-	hypothetical protein
1930	 75.12	0	2205144..2205545	+	133	153004809	-	Anae109_1947	-	hypothetical protein
1931	 79.50	+1	2205542..2206414	+	290	153004810	-	Anae109_1948	-	uroporphyrin-III C/tetrapyrrole methyltransferase
1932	 77.44	+1	2206437..2207522	-	361	153004811	-	Anae109_1949	-	GCN5-related N-acetyltransferase
1933	 71.54	0	2207757..2209109	-	450	153004812	-	Anae109_1950	-	hypothetical protein
1934	 70.91	0	2209322..2210734	-	470	153004813	-	Anae109_1951	-	two component, sigma54 specific, Fis family transcriptional regulator
1935	 72.55	0	2210788..2213046	-	752	153004814	-	Anae109_1952	-	signal transduction histidine kinase, nitrogen specific, NtrB
1936	 79.00	+1	2213203..2215473	+	756	153004815	-	Anae109_1953	-	lytic transglycosylase catalytic
1937	 70.88	0	2215560..2216153	+	197	153004816	-	Anae109_1954	-	HNH endonuclease
1938	 71.33	0	2216182..2217168	+	328	153004817	-	Anae109_1955	-	ATP-binding protein
1939	 77.14	+1	2217165..2218004	+	279	153004818	-	Anae109_1956	-	heat shock protein DnaJ domain-containing protein
1940	 65.54	-2	2218055..2218321	+	88	153004819	-	Anae109_1957	-	hypothetical protein
1941	 77.89	+1	2218432..2219313	+	293	153004820	-	Anae109_1958	-	RluA family pseudouridine synthase
1942	 78.87	+1	2219409..2220875	-	488	153004821	-	Anae109_1959	-	hypothetical protein
1943	 74.96	0	2221040..2222305	-	421	153004822	-	Anae109_1960	-	hypothetical protein
1944	 70.18	0	2222377..2223345	-	322	153004823	-	Anae109_1961	-	hypothetical protein
1945	 77.94	+1	2223368..2223997	-	209	153004824	-	Anae109_1962	-	methyltransferase type 11
1946	 73.16	0	2224033..2225910	-	625	153004825	-	Anae109_1963	-	ABC transporter related
1947	 66.72	-1	2225996..2227978	+	660	153004826	-	Anae109_1964	-	arginine decarboxylase
1948	 75.82	0	2228027..2228452	+	141	153004827	-	Anae109_1965	-	hypothetical protein
1949	 63.73	-2	2228677..2228880	+	67	153004828	-	Anae109_1966	-	hypothetical protein
1950	 74.06	0	2229010..2229834	+	274	153004829	-	Anae109_1967	-	methyltransferase type 11
1951	 74.94	0	2230059..2230844	+	261	153004830	-	Anae109_1968	-	hypothetical protein
1952	 70.79	0	2231140..2232789	-	549	153004831	-	Anae109_1969	-	HAD family hydrolase 5'-nucleotidase
1953	 79.07	+1	2232867..2233124	+	85	153004832	-	Anae109_1970	-	hypothetical protein
1954	 69.32	-1	2233131..2233469	-	112	153004833	-	Anae109_1971	-	XRE family transcriptional regulator
1955	 73.04	0	2233599..2234885	+	428	153004834	-	Anae109_1972	-	peptidase M16 domain-containing protein
1956	 75.23	0	2234882..2236201	+	439	153004835	-	Anae109_1973	-	peptidase M16 domain-containing protein
1957	 78.94	+1	2236212..2236928	+	238	153004836	-	Anae109_1974	-	pseudouridine synthase
1958	 70.56	0	2236989..2237399	-	136	153004837	-	Anae109_1975	-	hypothetical protein
1959	 67.86	-1	2237491..2238243	+	250	153004838	-	Anae109_1976	-	hypothetical protein
1960	 68.54	-1	2238247..2238993	+	248	153004839	-	Anae109_1977	-	ABC transporter related
1961	 69.54	0	2239013..2240719	+	568	153004840	-	Anae109_1978	-	hypothetical protein
1962	 75.73	0	2240765..2241757	-	330	153004841	-	Anae109_1979	-	hypothetical protein
1963	 73.72	0	2241761..2244340	-	859	153004842	-	Anae109_1980	-	TonB family protein
1964	 72.48	0	2244396..2244911	+	171	153004843	-	Anae109_1981	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
1965	 74.63	0	2244976..2245176	+	66	153004844	-	Anae109_1982	-	hypothetical protein
1966	 76.86	0	2245173..2246114	+	313	153004845	-	Anae109_1983	-	D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
1967	 71.93	0	2246256..2247338	+	360	153004846	-	Anae109_1984	-	hypothetical protein
1968	 67.39	-1	2247519..2247794	-	91	153004847	-	Anae109_1985	-	hypothetical protein
1969	 67.01	-1	2247955..2249424	-	489	153004848	-	Anae109_1986	-	extracellular HAF
1970	 73.44	0	2250053..2251129	+	358	153004849	-	Anae109_1987	-	LigA
1971	 70.91	0	2251160..2252926	+	588	153004850	-	Anae109_1988	-	methylmalonyl-CoA mutase, large subunit
1972	 70.24	0	2253058..2253477	+	139	153004851	-	Anae109_1989	-	cobalamin B12-binding domain-containing protein
1973	 74.50	0	2253478..2254485	-	335	153004852	-	Anae109_1990	-	molybdenum cofactor biosynthesis protein A
1974	 72.25	0	2254543..2255616	-	357	153004853	-	Anae109_1991	-	response regulator receiver modulated metal dependent phosphohydrolase
1975	 72.66	0	2255883..2256767	+	294	153004854	-	Anae109_1992	-	lipoyl synthase
1976	 73.17	0	2256780..2257979	+	399	153004855	-	Anae109_1993	-	3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
1977	 70.46	0	2257996..2258970	+	324	153004856	-	Anae109_1994	-	transketolase central region
1978	 74.65	0	2259036..2260400	+	454	153004857	-	Anae109_1995	-	dehydrogenase complex catalytic subunit
1979	 78.04	+1	2260678..2261187	+	169	153004858	-	Anae109_1996	-	TatD-related deoxyribonuclease
1980	 75.44	0	2261207..2262061	+	284	153004859	-	Anae109_1997	-	UBA/THIF-type NAD/FAD binding protein
1981	 70.33	0	2262211..2263656	+	481	153004860	-	Anae109_1998	-	dihydrolipoamide dehydrogenase
1982	 77.52	+1	2263653..2264804	+	383	153004861	-	Anae109_1999	-	lipoate-protein ligase B
1983	 74.66	0	2264825..2265412	+	195	153004862	-	Anae109_2000	-	hypothetical protein
1984	 67.89	-1	2265562..2266953	+	463	153004863	-	Anae109_2001	-	aspartate kinase
1985	 76.31	0	2267091..2267837	+	248	153004864	-	Anae109_2002	-	hypothetical protein
1986	 75.76	0	2267821..2268084	+	87	153004865	-	Anae109_2003	-	hypothetical protein
1987	 69.47	0	2268217..2269323	-	368	153004866	-	Anae109_2004	-	hypothetical protein
1988	 74.12	0	2269467..2271035	+	522	153004867	-	Anae109_2005	-	PAS/PAC sensor hybrid histidine kinase
1989	 72.27	0	2271091..2272464	-	457	153004868	-	Anae109_2006	-	aminotransferase class I and II
1990	 67.52	-1	2272788..2273375	+	195	153004869	-	Anae109_2007	-	molybdopterin oxidoreductase Fe4S4 region
1991	 66.95	-1	2273388..2275862	+	824	153004870	-	Anae109_2008	-	formate dehydrogenase, alpha subunit
1992	 68.73	-1	2275873..2276745	+	290	153004871	-	Anae109_2009	-	formate dehydrogenase, beta subunit
1993	 68.19	-1	2276749..2277468	+	239	153004872	-	Anae109_2010	-	formate dehydrogenase, gamma subunit
1994	 79.12	+1	2277465..2278331	+	288	153004873	-	Anae109_2011	-	formate dehydrogenase accessory protein FdhE
1995	 73.96	0	2278442..2279140	+	232	153004874	-	Anae109_2012	-	hypothetical protein
1996	 75.04	0	2279159..2280877	-	572	153004875	-	Anae109_2013	-	histidine ammonia-lyase
1997	 78.30	+1	2280981..2281427	+	148	153004876	-	Anae109_2014	-	DNA uptake protein
1998	 79.28	+1	2281487..2283103	+	538	153004877	-	Anae109_2015	-	Zinc finger-domain-containing protein
1999	 72.70	0	2283156..2284364	+	402	153004878	-	Anae109_2016	-	glycosyl transferase family protein
2000	 77.74	+1	2284399..2285997	+	532	153004879	-	Anae109_2017	-	amidohydrolase 3
2001	 78.34	+1	2286018..2286668	-	216	153004880	-	Anae109_2018	-	hypothetical protein
2002	 73.80	0	2286764..2287282	-	172	153004881	-	Anae109_2019	-	hypothetical protein
2003	 71.91	0	2287607..2288902	+	431	153004882	-	Anae109_2020	-	hypothetical protein
2004	 72.34	0	2289104..2291341	+	745	153004883	-	Anae109_2021	-	UvrD/REP helicase
2005	 69.67	0	2291365..2292993	+	542	153004884	-	Anae109_2022	-	2-alkenal reductase
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.