IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1867	 75.95	0	2157608..2160010	+	800	153004746	-	Anae109_1884	-	phenylalanyl-tRNA synthetase, beta subunit
1868	 77.85	+1	2160013..2160459	+	148	153004747	-	Anae109_1885	-	hypothetical protein
1869	 62.00	-2	2160539..2160838	+	99	153004748	-	Anae109_1886	-	integration host factor, alpha subunit
1870	 68.72	-1	2161422..2161811	+	129	153004749	-	Anae109_1887	-	putative 6-pyruvoyl tetrahydropterin synthase
1871	 78.33	+1	2161801..2162460	+	219	153004750	-	Anae109_1888	-	GTP cyclohydrolase I
1872	 76.30	0	2162457..2163131	+	224	153004751	-	Anae109_1889	-	short-chain dehydrogenase/reductase SDR
1873	 73.09	0	2163128..2164513	+	461	153004752	-	Anae109_1890	-	FAD linked oxidase domain-containing protein
1874	 68.70	-1	2164716..2166581	+	621	153004753	-	Anae109_1891	-	pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
1875	 67.62	-1	2166604..2167653	+	349	153004754	-	Anae109_1892	-	2-oxoglutarate ferredoxin oxidoreductase subunit beta
1876	 61.90	-2	2168010..2168282	+	90	153004755	-	Anae109_1893	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1877	 68.30	-1	2168292..2169455	+	387	153004756	-	Anae109_1894	-	2-oxoglutarate ferredoxin oxidoreductase subunit alpha
1878	 68.56	-1	2169452..2170348	+	298	153004757	-	Anae109_1895	-	2-oxoglutarate ferredoxin oxidoreductase subunit beta
1879	 67.21	-1	2170366..2170917	+	183	153004758	-	Anae109_1896	-	pyruvate ferredoxin/flavodoxin oxidoreductase
1880	 77.94	+1	2170993..2171799	-	268	153004759	-	Anae109_1897	-	TPR repeat-containing protein
1881	 74.75	0	2171929..2172423	-	164	153004760	-	Anae109_1898	-	putative lipoprotein
1882	 64.58	-2	2172474..2172665	+	63	153004761	-	Anae109_1899	-	hypothetical protein
1883	 69.11	-1	2172677..2173618	+	313	153004762	-	Anae109_1900	-	NAD-dependent epimerase/dehydratase
1884	 73.16	0	2173646..2174584	+	312	153004763	-	Anae109_1901	-	NAD-dependent epimerase/dehydratase
1885	 77.04	+1	2174685..2175638	+	317	153004764	-	Anae109_1902	-	hypothetical protein
1886	 75.23	0	2175655..2176530	-	291	153004765	-	Anae109_1903	-	monofunctional biosynthetic peptidoglycan transglycosylase
1887	 66.17	-1	2176853..2177458	+	201	153004766	-	Anae109_1904	-	manganese and iron superoxide dismutase
1888	 76.96	0	2177548..2178402	-	284	153004767	-	Anae109_1905	-	hypothetical protein
1889	 79.20	+1	2178493..2179593	+	366	153004768	-	Anae109_1906	-	A/G-specific adenine glycosylase
1890	 69.62	0	2180022..2180393	+	123	153004769	-	Anae109_1907	-	30S ribosomal protein S12
1891	 63.06	-2	2180414..2180884	+	156	153004770	-	Anae109_1908	-	30S ribosomal protein S7
1892	 66.00	-1	2181098..2183191	+	697	153004771	-	Anae109_1909	-	translation elongation factor G
1893	 67.84	-1	2183225..2184415	+	396	153004772	-	Anae109_1910	-	elongation factor Tu
1894	 63.73	-2	2184505..2184810	+	101	153004773	-	Anae109_1911	-	30S ribosomal protein S10
1895	 68.92	-1	2184823..2185443	+	206	153004774	-	Anae109_1912	-	ribosomal protein L4/L1e
1896	 65.65	-2	2185440..2185733	+	97	153004775	-	Anae109_1913	-	50S ribosomal protein L23
1897	 69.49	0	2185756..2186604	+	282	153004776	-	Anae109_1914	-	50S ribosomal protein L2
1898	 64.95	-2	2186628..2186918	+	96	153004777	-	Anae109_1915	-	ribosomal protein S19
1899	 72.87	0	2186932..2187366	+	144	153004778	-	Anae109_1916	-	ribosomal protein L22
1900	 67.70	-1	2187387..2188061	+	224	153004779	-	Anae109_1917	-	ribosomal protein S3
1901	 68.59	-1	2188094..2188510	+	138	153004780	-	Anae109_1918	-	50S ribosomal protein L16
1902	 66.67	-1	2188524..2188799	+	91	153004781	-	Anae109_1919	-	50S ribosomal protein L29
1903	 63.95	-2	2188805..2189062	+	85	153004782	-	Anae109_1920	-	ribosomal protein S17
1904	 66.40	-1	2189066..2189434	+	122	153004783	-	Anae109_1921	-	50S ribosomal protein L14
1905	 66.03	-1	2189437..2189751	+	104	153004784	-	Anae109_1922	-	ribosomal protein L24
1906	 63.72	-2	2189852..2190394	+	180	153004785	-	Anae109_1923	-	50S ribosomal protein L5
1907	 64.52	-2	2190406..2190591	+	61	153004786	-	Anae109_1924	-	ribosomal protein S14
1908	 66.67	-1	2190604..2191002	+	132	153004787	-	Anae109_1925	-	ribosomal protein S8
1909	 66.67	-1	2191016..2191558	+	180	153004788	-	Anae109_1926	-	ribosomal protein L6
1910	 69.44	-1	2191619..2191978	+	119	153004789	-	Anae109_1927	-	ribosomal protein L18
1911	 71.60	0	2191990..2192496	+	168	153004790	-	Anae109_1928	-	ribosomal protein S5
1912	 70.83	0	2192506..2192745	+	79	153004791	-	Anae109_1929	-	50S ribosomal protein L30
1913	 71.92	0	2192782..2193276	+	164	153004792	-	Anae109_1930	-	50S ribosomal protein L15
1914	 66.82	-1	2193349..2194686	+	445	153004793	-	Anae109_1931	-	preprotein translocase subunit SecY
1915	 71.16	0	2194739..2195383	+	214	153004794	-	Anae109_1932	-	adenylate kinase
1916	 76.17	0	2195407..2196216	+	269	153004795	-	Anae109_1933	-	methionine aminopeptidase, type I
1917	 62.39	-2	2196439..2196555	+	38	153004796	-	Anae109_1934	-	ribosomal protein L36
1918	 69.27	-1	2196582..2196965	+	127	153004797	-	Anae109_1935	-	30S ribosomal protein S13
1919	 70.62	0	2196996..2197475	+	159	153004798	-	Anae109_1936	-	30S ribosomal protein S11
1920	 67.46	-1	2197493..2198119	+	208	153004799	-	Anae109_1937	-	30S ribosomal protein S4
1921	 65.20	-2	2198367..2199386	+	339	153004800	-	Anae109_1938	-	DNA-directed RNA polymerase subunit alpha
1922	 69.63	0	2199416..2199922	+	168	153004801	-	Anae109_1939	-	ribosomal protein L17
1923	 79.49	+1	2200044..2200667	+	207	153004802	-	Anae109_1940	-	phosphoesterase PA-phosphatase related
1924	 67.04	-1	2200772..2201038	+	88	153004803	-	Anae109_1941	-	ribosomal protein S16
1925	 73.59	0	2201046..2201276	+	76	153004804	-	Anae109_1942	-	hypothetical protein
1926	 75.30	0	2201278..2201775	+	165	153004805	-	Anae109_1943	-	16S rRNA processing protein RimM
1927	 73.49	0	2201855..2202601	+	248	153004806	-	Anae109_1944	-	tRNA (guanine-N1)-methyltransferase
1928	 71.11	0	2202617..2203021	+	134	153004807	-	Anae109_1945	-	50S ribosomal protein L19
1929	 80.00	+1	2203340..2205139	+	599	153004808	-	Anae109_1946	-	hypothetical protein
1930	 75.12	0	2205144..2205545	+	133	153004809	-	Anae109_1947	-	hypothetical protein
1931	 79.50	+1	2205542..2206414	+	290	153004810	-	Anae109_1948	-	uroporphyrin-III C/tetrapyrrole methyltransferase
1932	 77.44	+1	2206437..2207522	-	361	153004811	-	Anae109_1949	-	GCN5-related N-acetyltransferase
1933	 71.54	0	2207757..2209109	-	450	153004812	-	Anae109_1950	-	hypothetical protein
1934	 70.91	0	2209322..2210734	-	470	153004813	-	Anae109_1951	-	two component, sigma54 specific, Fis family transcriptional regulator
1935	 72.55	0	2210788..2213046	-	752	153004814	-	Anae109_1952	-	signal transduction histidine kinase, nitrogen specific, NtrB
1936	 79.00	+1	2213203..2215473	+	756	153004815	-	Anae109_1953	-	lytic transglycosylase catalytic
1937	 70.88	0	2215560..2216153	+	197	153004816	-	Anae109_1954	-	HNH endonuclease
1938	 71.33	0	2216182..2217168	+	328	153004817	-	Anae109_1955	-	ATP-binding protein
1939	 77.14	+1	2217165..2218004	+	279	153004818	-	Anae109_1956	-	heat shock protein DnaJ domain-containing protein
1940	 65.54	-2	2218055..2218321	+	88	153004819	-	Anae109_1957	-	hypothetical protein
1941	 77.89	+1	2218432..2219313	+	293	153004820	-	Anae109_1958	-	RluA family pseudouridine synthase
1942	 78.87	+1	2219409..2220875	-	488	153004821	-	Anae109_1959	-	hypothetical protein
1943	 74.96	0	2221040..2222305	-	421	153004822	-	Anae109_1960	-	hypothetical protein
1944	 70.18	0	2222377..2223345	-	322	153004823	-	Anae109_1961	-	hypothetical protein
1945	 77.94	+1	2223368..2223997	-	209	153004824	-	Anae109_1962	-	methyltransferase type 11
1946	 73.16	0	2224033..2225910	-	625	153004825	-	Anae109_1963	-	ABC transporter related
1947	 66.72	-1	2225996..2227978	+	660	153004826	-	Anae109_1964	-	arginine decarboxylase
1948	 75.82	0	2228027..2228452	+	141	153004827	-	Anae109_1965	-	hypothetical protein
1949	 63.73	-2	2228677..2228880	+	67	153004828	-	Anae109_1966	-	hypothetical protein
1950	 74.06	0	2229010..2229834	+	274	153004829	-	Anae109_1967	-	methyltransferase type 11
1951	 74.94	0	2230059..2230844	+	261	153004830	-	Anae109_1968	-	hypothetical protein
1952	 70.79	0	2231140..2232789	-	549	153004831	-	Anae109_1969	-	HAD family hydrolase 5'-nucleotidase
1953	 79.07	+1	2232867..2233124	+	85	153004832	-	Anae109_1970	-	hypothetical protein
1954	 69.32	-1	2233131..2233469	-	112	153004833	-	Anae109_1971	-	XRE family transcriptional regulator
1955	 73.04	0	2233599..2234885	+	428	153004834	-	Anae109_1972	-	peptidase M16 domain-containing protein
1956	 75.23	0	2234882..2236201	+	439	153004835	-	Anae109_1973	-	peptidase M16 domain-containing protein
1957	 78.94	+1	2236212..2236928	+	238	153004836	-	Anae109_1974	-	pseudouridine synthase
1958	 70.56	0	2236989..2237399	-	136	153004837	-	Anae109_1975	-	hypothetical protein
1959	 67.86	-1	2237491..2238243	+	250	153004838	-	Anae109_1976	-	hypothetical protein
1960	 68.54	-1	2238247..2238993	+	248	153004839	-	Anae109_1977	-	ABC transporter related
1961	 69.54	0	2239013..2240719	+	568	153004840	-	Anae109_1978	-	hypothetical protein
1962	 75.73	0	2240765..2241757	-	330	153004841	-	Anae109_1979	-	hypothetical protein
1963	 73.72	0	2241761..2244340	-	859	153004842	-	Anae109_1980	-	TonB family protein
1964	 72.48	0	2244396..2244911	+	171	153004843	-	Anae109_1981	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
1965	 74.63	0	2244976..2245176	+	66	153004844	-	Anae109_1982	-	hypothetical protein
1966	 76.86	0	2245173..2246114	+	313	153004845	-	Anae109_1983	-	D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.