IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1825	 67.61	-1	2097875..2098300	-	141	153004704	-	Anae109_1842	-	hypothetical protein
1826	 72.98	0	2098353..2100965	+	870	153004705	-	Anae109_1843	-	hypothetical protein
1827	 70.95	0	2101049..2101468	-	139	153004706	-	Anae109_1844	-	hypothetical protein
1828	 72.94	0	2101761..2103098	+	445	153004707	-	Anae109_1845	-	glutamyl-tRNA reductase
1829	 71.65	0	2103182..2104687	+	501	153004708	-	Anae109_1846	-	histidine kinase
1830	 71.16	0	2104684..2106063	+	459	153004709	-	Anae109_1847	-	two component, sigma54 specific, Fis family transcriptional regulator
1831	 66.23	-1	2106396..2107319	-	307	153004710	-	Anae109_1848	-	RNA polymerase sigma factor RpoH
1832	 72.94	0	2107620..2108336	+	238	153004711	-	Anae109_1849	-	histidine kinase A domain-containing protein
1833	 69.82	0	2108333..2108713	+	126	153004712	-	Anae109_1850	-	response regulator receiver protein
1834	 68.35	-1	2108895..2109605	+	236	153004713	-	Anae109_1851	-	50S ribosomal protein L3
1835	 67.05	-1	2109735..2111306	-	523	153004714	-	Anae109_1852	-	hypothetical protein
1836	 68.83	-1	2111408..2113258	-	616	153004715	-	Anae109_1853	-	GTP-binding protein TypA
1837	 74.70	0	2113428..2116763	+	1111	153004716	-	Anae109_1854	-	histidine kinase
1838	 76.15	0	2116760..2118562	+	600	153004717	-	Anae109_1855	-	histidine kinase
1839	 78.06	+1	2118566..2119513	+	315	153004718	-	Anae109_1856	-	hypothetical protein
1840	 72.57	0	2119593..2121794	-	733	153004719	-	Anae109_1857	-	fibronectin type III domain-containing protein
1841	 72.73	0	2123074..2123436	+	120	153004720	-	Anae109_1858	-	hypothetical protein
1842	 77.30	+1	2123479..2125068	+	529	153004721	-	Anae109_1859	-	hypothetical protein
1843	 79.97	+1	2125077..2126858	+	593	153004722	-	Anae109_1860	-	hypothetical protein
1844	 79.17	+1	2126858..2130289	+	1143	153004723	-	Anae109_1861	-	hypothetical protein
1845	 78.10	+1	2130292..2132601	+	769	153004724	-	Anae109_1862	-	hypothetical protein
1846	 77.85	+1	2132594..2133889	-	431	153004725	-	Anae109_1863	-	response regulator receiver protein
1847	 67.91	-1	2133957..2134922	-	321	153004726	-	Anae109_1864	-	magnesium and cobalt transport protein CorA
1848	 75.06	0	2135099..2135491	+	130	153004727	-	Anae109_1865	-	glyoxalase/bleomycin resistance protein/dioxygenase
1849	 76.43	0	2135524..2136291	+	255	153004728	-	Anae109_1866	-	hydroxyacylglutathione hydrolase
1850	 74.96	0	2136303..2136905	+	200	153004729	-	Anae109_1867	-	CDP-alcohol phosphatidyltransferase
1851	 68.52	-1	2136963..2138039	+	358	153004730	-	Anae109_1868	-	hypothetical protein
1852	 64.57	-2	2138626..2140059	-	477	153004731	-	Anae109_1869	-	PKD domain-containing protein
1853	 73.43	0	2140433..2141821	+	462	153004732	-	Anae109_1870	-	histidine kinase
1854	 69.65	0	2142186..2142554	+	122	153004733	-	Anae109_1871	-	hypothetical protein
1855	 69.96	0	2142612..2145158	+	848	153004734	-	Anae109_1872	-	hypothetical protein
1856	 69.35	-1	2145298..2147343	+	681	153004735	-	Anae109_1873	-	threonyl-tRNA synthetase
1857	 71.06	0	2147914..2149482	+	522	153004736	-	Anae109_1874	-	2-isopropylmalate synthase
1858	 73.97	0	2149482..2150918	+	478	153004737	-	Anae109_1875	-	isopropylmalate isomerase large subunit
1859	 69.60	0	2150923..2151501	+	192	153004738	-	Anae109_1876	-	3-isopropylmalate dehydratase, small subunit
1860	 69.59	0	2151611..2153323	+	570	153004739	-	Anae109_1877	-	acetolactate synthase, large subunit, biosynthetic type
1861	 69.10	-1	2153325..2153858	+	177	153004740	-	Anae109_1878	-	acetolactate synthase, small subunit
1862	 68.90	-1	2153874..2154902	+	342	153004741	-	Anae109_1879	-	ketol-acid reductoisomerase
1863	 70.43	0	2155083..2155772	+	229	153004742	-	Anae109_1880	-	translation initiation factor IF-3
1864	 63.73	-2	2155860..2156063	+	67	153004743	-	Anae109_1881	-	50S ribosomal protein L35
1865	 71.30	0	2156164..2156508	+	114	153004744	-	Anae109_1882	-	50S ribosomal protein L20
1866	 71.20	0	2156519..2157598	+	359	153004745	-	Anae109_1883	-	phenylalanyl-tRNA synthetase, alpha subunit
1867	 75.95	0	2157608..2160010	+	800	153004746	-	Anae109_1884	-	phenylalanyl-tRNA synthetase, beta subunit
1868	 77.85	+1	2160013..2160459	+	148	153004747	-	Anae109_1885	-	hypothetical protein
1869	 62.00	-2	2160539..2160838	+	99	153004748	-	Anae109_1886	-	integration host factor, alpha subunit
1870	 68.72	-1	2161422..2161811	+	129	153004749	-	Anae109_1887	-	putative 6-pyruvoyl tetrahydropterin synthase
1871	 78.33	+1	2161801..2162460	+	219	153004750	-	Anae109_1888	-	GTP cyclohydrolase I
1872	 76.30	0	2162457..2163131	+	224	153004751	-	Anae109_1889	-	short-chain dehydrogenase/reductase SDR
1873	 73.09	0	2163128..2164513	+	461	153004752	-	Anae109_1890	-	FAD linked oxidase domain-containing protein
1874	 68.70	-1	2164716..2166581	+	621	153004753	-	Anae109_1891	-	pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
1875	 67.62	-1	2166604..2167653	+	349	153004754	-	Anae109_1892	-	2-oxoglutarate ferredoxin oxidoreductase subunit beta
1876	 61.90	-2	2168010..2168282	+	90	153004755	-	Anae109_1893	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1877	 68.30	-1	2168292..2169455	+	387	153004756	-	Anae109_1894	-	2-oxoglutarate ferredoxin oxidoreductase subunit alpha
1878	 68.56	-1	2169452..2170348	+	298	153004757	-	Anae109_1895	-	2-oxoglutarate ferredoxin oxidoreductase subunit beta
1879	 67.21	-1	2170366..2170917	+	183	153004758	-	Anae109_1896	-	pyruvate ferredoxin/flavodoxin oxidoreductase
1880	 77.94	+1	2170993..2171799	-	268	153004759	-	Anae109_1897	-	TPR repeat-containing protein
1881	 74.75	0	2171929..2172423	-	164	153004760	-	Anae109_1898	-	putative lipoprotein
1882	 64.58	-2	2172474..2172665	+	63	153004761	-	Anae109_1899	-	hypothetical protein
1883	 69.11	-1	2172677..2173618	+	313	153004762	-	Anae109_1900	-	NAD-dependent epimerase/dehydratase
1884	 73.16	0	2173646..2174584	+	312	153004763	-	Anae109_1901	-	NAD-dependent epimerase/dehydratase
1885	 77.04	+1	2174685..2175638	+	317	153004764	-	Anae109_1902	-	hypothetical protein
1886	 75.23	0	2175655..2176530	-	291	153004765	-	Anae109_1903	-	monofunctional biosynthetic peptidoglycan transglycosylase
1887	 66.17	-1	2176853..2177458	+	201	153004766	-	Anae109_1904	-	manganese and iron superoxide dismutase
1888	 76.96	0	2177548..2178402	-	284	153004767	-	Anae109_1905	-	hypothetical protein
1889	 79.20	+1	2178493..2179593	+	366	153004768	-	Anae109_1906	-	A/G-specific adenine glycosylase
1890	 69.62	0	2180022..2180393	+	123	153004769	-	Anae109_1907	-	30S ribosomal protein S12
1891	 63.06	-2	2180414..2180884	+	156	153004770	-	Anae109_1908	-	30S ribosomal protein S7
1892	 66.00	-1	2181098..2183191	+	697	153004771	-	Anae109_1909	-	translation elongation factor G
1893	 67.84	-1	2183225..2184415	+	396	153004772	-	Anae109_1910	-	elongation factor Tu
1894	 63.73	-2	2184505..2184810	+	101	153004773	-	Anae109_1911	-	30S ribosomal protein S10
1895	 68.92	-1	2184823..2185443	+	206	153004774	-	Anae109_1912	-	ribosomal protein L4/L1e
1896	 65.65	-2	2185440..2185733	+	97	153004775	-	Anae109_1913	-	50S ribosomal protein L23
1897	 69.49	0	2185756..2186604	+	282	153004776	-	Anae109_1914	-	50S ribosomal protein L2
1898	 64.95	-2	2186628..2186918	+	96	153004777	-	Anae109_1915	-	ribosomal protein S19
1899	 72.87	0	2186932..2187366	+	144	153004778	-	Anae109_1916	-	ribosomal protein L22
1900	 67.70	-1	2187387..2188061	+	224	153004779	-	Anae109_1917	-	ribosomal protein S3
1901	 68.59	-1	2188094..2188510	+	138	153004780	-	Anae109_1918	-	50S ribosomal protein L16
1902	 66.67	-1	2188524..2188799	+	91	153004781	-	Anae109_1919	-	50S ribosomal protein L29
1903	 63.95	-2	2188805..2189062	+	85	153004782	-	Anae109_1920	-	ribosomal protein S17
1904	 66.40	-1	2189066..2189434	+	122	153004783	-	Anae109_1921	-	50S ribosomal protein L14
1905	 66.03	-1	2189437..2189751	+	104	153004784	-	Anae109_1922	-	ribosomal protein L24
1906	 63.72	-2	2189852..2190394	+	180	153004785	-	Anae109_1923	-	50S ribosomal protein L5
1907	 64.52	-2	2190406..2190591	+	61	153004786	-	Anae109_1924	-	ribosomal protein S14
1908	 66.67	-1	2190604..2191002	+	132	153004787	-	Anae109_1925	-	ribosomal protein S8
1909	 66.67	-1	2191016..2191558	+	180	153004788	-	Anae109_1926	-	ribosomal protein L6
1910	 69.44	-1	2191619..2191978	+	119	153004789	-	Anae109_1927	-	ribosomal protein L18
1911	 71.60	0	2191990..2192496	+	168	153004790	-	Anae109_1928	-	ribosomal protein S5
1912	 70.83	0	2192506..2192745	+	79	153004791	-	Anae109_1929	-	50S ribosomal protein L30
1913	 71.92	0	2192782..2193276	+	164	153004792	-	Anae109_1930	-	50S ribosomal protein L15
1914	 66.82	-1	2193349..2194686	+	445	153004793	-	Anae109_1931	-	preprotein translocase subunit SecY
1915	 71.16	0	2194739..2195383	+	214	153004794	-	Anae109_1932	-	adenylate kinase
1916	 76.17	0	2195407..2196216	+	269	153004795	-	Anae109_1933	-	methionine aminopeptidase, type I
1917	 62.39	-2	2196439..2196555	+	38	153004796	-	Anae109_1934	-	ribosomal protein L36
1918	 69.27	-1	2196582..2196965	+	127	153004797	-	Anae109_1935	-	30S ribosomal protein S13
1919	 70.62	0	2196996..2197475	+	159	153004798	-	Anae109_1936	-	30S ribosomal protein S11
1920	 67.46	-1	2197493..2198119	+	208	153004799	-	Anae109_1937	-	30S ribosomal protein S4
1921	 65.20	-2	2198367..2199386	+	339	153004800	-	Anae109_1938	-	DNA-directed RNA polymerase subunit alpha
1922	 69.63	0	2199416..2199922	+	168	153004801	-	Anae109_1939	-	ribosomal protein L17
1923	 79.49	+1	2200044..2200667	+	207	153004802	-	Anae109_1940	-	phosphoesterase PA-phosphatase related
1924	 67.04	-1	2200772..2201038	+	88	153004803	-	Anae109_1941	-	ribosomal protein S16
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.