IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1779	 71.79	0	2029322..2031076	+	584	153004658	-	Anae109_1796	-	histidine kinase
1780	 71.56	0	2031131..2031661	+	176	153004659	-	Anae109_1797	-	peptidase zinc-dependent
1781	 69.88	0	2031666..2033066	+	466	153004660	-	Anae109_1798	-	two component, sigma54 specific, Fis family transcriptional regulator
1782	 76.30	0	2033165..2034970	+	601	153004661	-	Anae109_1799	-	hypothetical protein
1783	 70.61	0	2035484..2036371	+	295	153004662	-	Anae109_1800	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1784	 67.16	-1	2036364..2037590	+	408	153004663	-	Anae109_1801	-	polysulphide reductase NrfD
1785	 75.27	0	2037602..2038333	+	243	153004664	-	Anae109_1802	-	glycine cleavage H-protein
1786	 72.51	0	2038348..2038689	+	113	153004665	-	Anae109_1803	-	hypothetical protein
1787	 74.07	0	2038837..2039538	+	233	153004666	-	Anae109_1804	-	glycine cleavage H-protein
1788	 67.53	-1	2040075..2041115	+	346	153004667	-	Anae109_1805	-	cytochrome C family protein
1789	 64.65	-2	2041112..2041855	+	247	153004668	-	Anae109_1806	-	deca-heme C-type cytochrome-like protein
1790	 76.39	0	2041833..2042819	+	328	153004669	-	Anae109_1807	-	peptidase M56 BlaR1
1791	 75.99	0	2042816..2043394	+	192	153004670	-	Anae109_1808	-	hypothetical protein
1792	 74.88	0	2043391..2045313	+	640	153004671	-	Anae109_1809	-	histidine kinase
1793	 69.56	0	2045310..2045966	+	218	153004672	-	Anae109_1810	-	two component LuxR family transcriptional regulator
1794	 74.42	0	2046104..2047960	-	618	153004673	-	Anae109_1811	-	peptidase S8 and S53 subtilisin kexin sedolisin
1795	 67.59	-1	2048057..2049901	-	614	153004674	-	Anae109_1812	-	hypothetical protein
1796	 68.44	-1	2050013..2051254	-	413	153004675	-	Anae109_1813	-	glycosyl transferase group 1
1797	 67.45	-1	2051558..2052964	+	468	153004676	-	Anae109_1814	-	polysaccharide biosynthesis protein
1798	 65.94	-1	2052961..2053788	+	275	153004677	-	Anae109_1815	-	methyltransferase type 11
1799	 72.14	0	2053789..2054940	+	383	153004678	-	Anae109_1816	-	hypothetical protein
1800	 69.83	0	2054965..2056671	-	568	153004679	-	Anae109_1817	-	hypothetical protein
1801	 67.86	-1	2056706..2057713	-	335	153004680	-	Anae109_1818	-	glycosyl transferase family protein
1802	 71.12	0	2057710..2058696	-	328	153004681	-	Anae109_1819	-	hypothetical protein
1803	 68.07	-1	2058693..2059121	-	142	153004682	-	Anae109_1820	-	hypothetical protein
1804	 70.03	0	2059118..2059831	-	237	153004683	-	Anae109_1821	-	glycosyl transferase family protein
1805	 70.93	0	2059991..2060788	+	265	153004684	-	Anae109_1822	-	glycosyl transferase family protein
1806	 74.01	0	2061252..2065829	+	1525	153004685	-	Anae109_1823	-	cytochrome C family protein
1807	 70.51	0	2065836..2066225	-	129	153004686	-	Anae109_1824	-	hypothetical protein
1808	 71.54	0	2066417..2069392	+	991	153004687	-	Anae109_1825	-	spermine synthase
1809	 74.34	0	2069599..2074536	+	1645	153004688	-	Anae109_1826	-	cytochrome C family protein
1810	 74.58	0	2074605..2076575	+	656	153004689	-	Anae109_1827	-	cytochrome C family protein
1811	 75.91	0	2076606..2078996	-	796	153004690	-	Anae109_1828	-	hypothetical protein
1812	 70.69	0	2079278..2080990	+	570	153004691	-	Anae109_1829	-	hypothetical protein
1813	 70.81	0	2081397..2082773	+	458	153004692	-	Anae109_1830	-	cytochrome c family protein
1814	 74.48	0	2082912..2084345	+	477	153004693	-	Anae109_1831	-	hypothetical protein
1815	 70.85	0	2084349..2086547	+	732	153004694	-	Anae109_1832	-	hypothetical protein
1816	 68.24	-1	2086567..2087139	+	190	153004695	-	Anae109_1833	-	putative lipoprotein
1817	 72.05	0	2087111..2088280	+	389	153004696	-	Anae109_1834	-	putative lipoprotein
1818	 69.91	0	2088473..2090227	+	584	153004697	-	Anae109_1835	-	PpiC-type peptidyl-prolyl cis-trans isomerase
1819	 70.01	0	2090242..2092218	+	658	153004698	-	Anae109_1836	-	cytochrome C family protein
1820	 69.77	0	2092215..2093504	+	429	153004699	-	Anae109_1837	-	cytochrome C family protein
1821	 70.15	0	2093510..2094400	+	296	153004700	-	Anae109_1838	-	NHL repeat-containing protein
1822	 67.87	-1	2094409..2095323	+	304	153004701	-	Anae109_1839	-	NHL repeat-containing protein
1823	 70.92	0	2095339..2097312	-	657	153004702	-	Anae109_1840	-	TPR repeat-containing protein
1824	 70.71	0	2097420..2097839	-	139	153004703	-	Anae109_1841	-	hypothetical protein
1825	 67.61	-1	2097875..2098300	-	141	153004704	-	Anae109_1842	-	hypothetical protein
1826	 72.98	0	2098353..2100965	+	870	153004705	-	Anae109_1843	-	hypothetical protein
1827	 70.95	0	2101049..2101468	-	139	153004706	-	Anae109_1844	-	hypothetical protein
1828	 72.94	0	2101761..2103098	+	445	153004707	-	Anae109_1845	-	glutamyl-tRNA reductase
1829	 71.65	0	2103182..2104687	+	501	153004708	-	Anae109_1846	-	histidine kinase
1830	 71.16	0	2104684..2106063	+	459	153004709	-	Anae109_1847	-	two component, sigma54 specific, Fis family transcriptional regulator
1831	 66.23	-1	2106396..2107319	-	307	153004710	-	Anae109_1848	-	RNA polymerase sigma factor RpoH
1832	 72.94	0	2107620..2108336	+	238	153004711	-	Anae109_1849	-	histidine kinase A domain-containing protein
1833	 69.82	0	2108333..2108713	+	126	153004712	-	Anae109_1850	-	response regulator receiver protein
1834	 68.35	-1	2108895..2109605	+	236	153004713	-	Anae109_1851	-	50S ribosomal protein L3
1835	 67.05	-1	2109735..2111306	-	523	153004714	-	Anae109_1852	-	hypothetical protein
1836	 68.83	-1	2111408..2113258	-	616	153004715	-	Anae109_1853	-	GTP-binding protein TypA
1837	 74.70	0	2113428..2116763	+	1111	153004716	-	Anae109_1854	-	histidine kinase
1838	 76.15	0	2116760..2118562	+	600	153004717	-	Anae109_1855	-	histidine kinase
1839	 78.06	+1	2118566..2119513	+	315	153004718	-	Anae109_1856	-	hypothetical protein
1840	 72.57	0	2119593..2121794	-	733	153004719	-	Anae109_1857	-	fibronectin type III domain-containing protein
1841	 72.73	0	2123074..2123436	+	120	153004720	-	Anae109_1858	-	hypothetical protein
1842	 77.30	+1	2123479..2125068	+	529	153004721	-	Anae109_1859	-	hypothetical protein
1843	 79.97	+1	2125077..2126858	+	593	153004722	-	Anae109_1860	-	hypothetical protein
1844	 79.17	+1	2126858..2130289	+	1143	153004723	-	Anae109_1861	-	hypothetical protein
1845	 78.10	+1	2130292..2132601	+	769	153004724	-	Anae109_1862	-	hypothetical protein
1846	 77.85	+1	2132594..2133889	-	431	153004725	-	Anae109_1863	-	response regulator receiver protein
1847	 67.91	-1	2133957..2134922	-	321	153004726	-	Anae109_1864	-	magnesium and cobalt transport protein CorA
1848	 75.06	0	2135099..2135491	+	130	153004727	-	Anae109_1865	-	glyoxalase/bleomycin resistance protein/dioxygenase
1849	 76.43	0	2135524..2136291	+	255	153004728	-	Anae109_1866	-	hydroxyacylglutathione hydrolase
1850	 74.96	0	2136303..2136905	+	200	153004729	-	Anae109_1867	-	CDP-alcohol phosphatidyltransferase
1851	 68.52	-1	2136963..2138039	+	358	153004730	-	Anae109_1868	-	hypothetical protein
1852	 64.57	-2	2138626..2140059	-	477	153004731	-	Anae109_1869	-	PKD domain-containing protein
1853	 73.43	0	2140433..2141821	+	462	153004732	-	Anae109_1870	-	histidine kinase
1854	 69.65	0	2142186..2142554	+	122	153004733	-	Anae109_1871	-	hypothetical protein
1855	 69.96	0	2142612..2145158	+	848	153004734	-	Anae109_1872	-	hypothetical protein
1856	 69.35	-1	2145298..2147343	+	681	153004735	-	Anae109_1873	-	threonyl-tRNA synthetase
1857	 71.06	0	2147914..2149482	+	522	153004736	-	Anae109_1874	-	2-isopropylmalate synthase
1858	 73.97	0	2149482..2150918	+	478	153004737	-	Anae109_1875	-	isopropylmalate isomerase large subunit
1859	 69.60	0	2150923..2151501	+	192	153004738	-	Anae109_1876	-	3-isopropylmalate dehydratase, small subunit
1860	 69.59	0	2151611..2153323	+	570	153004739	-	Anae109_1877	-	acetolactate synthase, large subunit, biosynthetic type
1861	 69.10	-1	2153325..2153858	+	177	153004740	-	Anae109_1878	-	acetolactate synthase, small subunit
1862	 68.90	-1	2153874..2154902	+	342	153004741	-	Anae109_1879	-	ketol-acid reductoisomerase
1863	 70.43	0	2155083..2155772	+	229	153004742	-	Anae109_1880	-	translation initiation factor IF-3
1864	 63.73	-2	2155860..2156063	+	67	153004743	-	Anae109_1881	-	50S ribosomal protein L35
1865	 71.30	0	2156164..2156508	+	114	153004744	-	Anae109_1882	-	50S ribosomal protein L20
1866	 71.20	0	2156519..2157598	+	359	153004745	-	Anae109_1883	-	phenylalanyl-tRNA synthetase, alpha subunit
1867	 75.95	0	2157608..2160010	+	800	153004746	-	Anae109_1884	-	phenylalanyl-tRNA synthetase, beta subunit
1868	 77.85	+1	2160013..2160459	+	148	153004747	-	Anae109_1885	-	hypothetical protein
1869	 62.00	-2	2160539..2160838	+	99	153004748	-	Anae109_1886	-	integration host factor, alpha subunit
1870	 68.72	-1	2161422..2161811	+	129	153004749	-	Anae109_1887	-	putative 6-pyruvoyl tetrahydropterin synthase
1871	 78.33	+1	2161801..2162460	+	219	153004750	-	Anae109_1888	-	GTP cyclohydrolase I
1872	 76.30	0	2162457..2163131	+	224	153004751	-	Anae109_1889	-	short-chain dehydrogenase/reductase SDR
1873	 73.09	0	2163128..2164513	+	461	153004752	-	Anae109_1890	-	FAD linked oxidase domain-containing protein
1874	 68.70	-1	2164716..2166581	+	621	153004753	-	Anae109_1891	-	pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
1875	 67.62	-1	2166604..2167653	+	349	153004754	-	Anae109_1892	-	2-oxoglutarate ferredoxin oxidoreductase subunit beta
1876	 61.90	-2	2168010..2168282	+	90	153004755	-	Anae109_1893	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1877	 68.30	-1	2168292..2169455	+	387	153004756	-	Anae109_1894	-	2-oxoglutarate ferredoxin oxidoreductase subunit alpha
1878	 68.56	-1	2169452..2170348	+	298	153004757	-	Anae109_1895	-	2-oxoglutarate ferredoxin oxidoreductase subunit beta
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.