IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1722	 78.54	+1	1960121..1960735	-	204	153004601	-	Anae109_1739	-	DTW domain-containing protein
1723	 78.77	+1	1960892..1961494	+	200	153004602	-	Anae109_1740	-	hypothetical protein
1724	 71.22	0	1961491..1961973	+	160	153004603	-	Anae109_1741	-	ybaK/ebsC protein
1725	 71.84	0	1962339..1963634	+	431	153004604	-	Anae109_1742	-	hypothetical protein
1726	 74.43	0	1963870..1964397	+	175	153004605	-	Anae109_1743	-	ribonuclease H
1727	 74.47	0	1964747..1966195	+	482	153004606	-	Anae109_1744	-	aminoacyl-histidine dipeptidase
1728	 73.16	0	1966315..1967469	+	384	153004607	-	Anae109_1745	-	hypothetical protein
1729	 78.23	+1	1967466..1967906	+	146	153004608	-	Anae109_1746	-	peptidoglycan binding domain-containing protein
1730	 73.12	0	1968014..1968199	+	61	153004609	-	Anae109_1747	-	hypothetical protein
1731	 74.80	0	1968297..1968542	+	81	153004610	-	Anae109_1748	-	hypothetical protein
1732	 71.30	0	1968610..1968933	-	107	153004611	-	Anae109_1749	-	peptidylprolyl isomerase FKBP-type
1733	 71.78	0	1969125..1969652	-	175	153004612	-	Anae109_1750	-	rubrerythrin
1734	 76.84	0	1969752..1970822	+	356	153004613	-	Anae109_1751	-	phospholipid/glycerol acyltransferase
1735	 76.58	0	1970798..1971160	-	120	153004614	-	Anae109_1752	-	hypothetical protein
1736	 72.40	0	1971363..1972931	+	522	153004615	-	Anae109_1753	-	putative alpha-isopropylmalate/homocitrate synthase family transferase
1737	 73.62	0	1972928..1973992	+	354	153004616	-	Anae109_1754	-	3-isopropylmalate dehydrogenase
1738	 70.78	0	1974185..1975666	+	493	153004617	-	Anae109_1755	-	peptidase M48 Ste24p
1739	 78.32	+1	1975686..1976663	+	325	153004618	-	Anae109_1756	-	aldo/keto reductase
1740	 74.06	0	1977268..1979337	-	689	153004619	-	Anae109_1757	-	translation elongation factor G
1741	 72.83	0	1979586..1980185	+	199	153004620	-	Anae109_1758	-	hypothetical protein
1742	 71.93	0	1980196..1981791	-	531	153004621	-	Anae109_1759	-	Na+ symporter
1743	 70.75	0	1981829..1983199	+	456	153004622	-	Anae109_1760	-	tryptophanase
1744	 77.94	+1	1983321..1983737	-	138	153004623	-	Anae109_1761	-	type II and III secretion system protein domain-containing protein
1745	 74.01	0	1983778..1984512	+	244	153004624	-	Anae109_1762	-	hypothetical protein
1746	 77.87	+1	1984523..1985281	+	252	153004625	-	Anae109_1763	-	hypothetical protein
1747	 72.45	0	1985315..1985902	-	195	153004626	-	Anae109_1764	-	hemerythrin-like metal-binding protein
1748	 75.73	0	1986179..1986961	-	260	153004627	-	Anae109_1765	-	phosphomethylpyrimidine kinase
1749	 74.15	0	1987061..1989532	+	823	153004628	-	Anae109_1766	-	glycoside hydrolase family protein
1750	 70.20	0	1989782..1991734	+	650	153004629	-	Anae109_1767	-	AMP-dependent synthetase and ligase
1751	 74.69	0	1992046..1992618	+	190	153004630	-	Anae109_1768	-	hypothetical protein
1752	 75.58	0	1992676..1992933	+	85	153004631	-	Anae109_1769	-	hypothetical protein
1753	 76.05	0	1993398..1994228	+	276	153004632	-	Anae109_1770	-	hypothetical protein
1754	 76.62	0	1994247..1997018	+	923	153004633	-	Anae109_1771	-	PAS/PAC sensor hybrid histidine kinase
1755	 76.09	0	1997069..1997758	+	229	153004634	-	Anae109_1772	-	ABC transporter related
1756	 78.58	+1	1997761..2000286	+	841	153004635	-	Anae109_1773	-	hypothetical protein
1757	 76.91	0	2000273..2001385	+	370	153004636	-	Anae109_1774	-	hypothetical protein
1758	 71.30	0	2001455..2003182	+	575	153004637	-	Anae109_1775	-	bifunctional isocitrate dehydrogenase kinase/phosphatase protein
1759	 78.09	+1	2003225..2004808	-	527	153004638	-	Anae109_1776	-	serine/threonine protein kinase
1760	 78.67	+1	2004817..2006949	-	710	153004639	-	Anae109_1777	-	TPR repeat-containing protein
1761	 74.37	0	2006930..2010319	-	1129	153004640	-	Anae109_1778	-	glycosyl transferase family protein
1762	 75.35	0	2010448..2011311	-	287	153004641	-	Anae109_1779	-	hypothetical protein
1763	 73.18	0	2011563..2013206	+	547	153004642	-	Anae109_1780	-	phosphoglucomutase
1764	 77.61	+1	2013277..2013861	-	194	153004643	-	Anae109_1781	-	kinase-like protein
1765	 78.17	+1	2013895..2014737	+	280	153004644	-	Anae109_1782	-	3-beta hydroxysteroid dehydrogenase/isomerase
1766	 76.97	0	2014782..2015237	-	151	153004645	-	Anae109_1783	-	hypothetical protein
1767	 66.24	-1	2015516..2015752	+	78	153004646	-	Anae109_1784	-	hypothetical protein
1768	 70.57	0	2015911..2017779	+	622	153004647	-	Anae109_1785	-	peptidyl-dipeptidase A
1769	 64.79	-2	2017873..2018085	-	70	153004648	-	Anae109_1786	-	CsbD family protein
1770	 70.97	0	2018216..2021350	-	1044	153004649	-	Anae109_1787	-	acriflavin resistance protein
1771	 77.17	+1	2021347..2022498	-	383	153004650	-	Anae109_1788	-	RND family efflux transporter MFP subunit
1772	 78.54	+1	2022495..2023976	-	493	153004651	-	Anae109_1789	-	outer membrane efflux protein
1773	 70.74	0	2024040..2024309	-	89	153004652	-	Anae109_1790	-	glutaredoxin 3
1774	 74.76	0	2024383..2025309	-	308	153004653	-	Anae109_1791	-	peptidase M48 Ste24p
1775	 73.07	0	2025383..2026288	-	301	153004654	-	Anae109_1792	-	LysR family transcriptional regulator
1776	 66.77	-1	2026394..2027350	+	318	153004655	-	Anae109_1793	-	integral membrane protein TerC
1777	 71.15	0	2027370..2027681	-	103	153004656	-	Anae109_1794	-	hypothetical protein
1778	 70.38	0	2027871..2028731	-	286	153004657	-	Anae109_1795	-	formyltetrahydrofolate deformylase
1779	 71.79	0	2029322..2031076	+	584	153004658	-	Anae109_1796	-	histidine kinase
1780	 71.56	0	2031131..2031661	+	176	153004659	-	Anae109_1797	-	peptidase zinc-dependent
1781	 69.88	0	2031666..2033066	+	466	153004660	-	Anae109_1798	-	two component, sigma54 specific, Fis family transcriptional regulator
1782	 76.30	0	2033165..2034970	+	601	153004661	-	Anae109_1799	-	hypothetical protein
1783	 70.61	0	2035484..2036371	+	295	153004662	-	Anae109_1800	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1784	 67.16	-1	2036364..2037590	+	408	153004663	-	Anae109_1801	-	polysulphide reductase NrfD
1785	 75.27	0	2037602..2038333	+	243	153004664	-	Anae109_1802	-	glycine cleavage H-protein
1786	 72.51	0	2038348..2038689	+	113	153004665	-	Anae109_1803	-	hypothetical protein
1787	 74.07	0	2038837..2039538	+	233	153004666	-	Anae109_1804	-	glycine cleavage H-protein
1788	 67.53	-1	2040075..2041115	+	346	153004667	-	Anae109_1805	-	cytochrome C family protein
1789	 64.65	-2	2041112..2041855	+	247	153004668	-	Anae109_1806	-	deca-heme C-type cytochrome-like protein
1790	 76.39	0	2041833..2042819	+	328	153004669	-	Anae109_1807	-	peptidase M56 BlaR1
1791	 75.99	0	2042816..2043394	+	192	153004670	-	Anae109_1808	-	hypothetical protein
1792	 74.88	0	2043391..2045313	+	640	153004671	-	Anae109_1809	-	histidine kinase
1793	 69.56	0	2045310..2045966	+	218	153004672	-	Anae109_1810	-	two component LuxR family transcriptional regulator
1794	 74.42	0	2046104..2047960	-	618	153004673	-	Anae109_1811	-	peptidase S8 and S53 subtilisin kexin sedolisin
1795	 67.59	-1	2048057..2049901	-	614	153004674	-	Anae109_1812	-	hypothetical protein
1796	 68.44	-1	2050013..2051254	-	413	153004675	-	Anae109_1813	-	glycosyl transferase group 1
1797	 67.45	-1	2051558..2052964	+	468	153004676	-	Anae109_1814	-	polysaccharide biosynthesis protein
1798	 65.94	-1	2052961..2053788	+	275	153004677	-	Anae109_1815	-	methyltransferase type 11
1799	 72.14	0	2053789..2054940	+	383	153004678	-	Anae109_1816	-	hypothetical protein
1800	 69.83	0	2054965..2056671	-	568	153004679	-	Anae109_1817	-	hypothetical protein
1801	 67.86	-1	2056706..2057713	-	335	153004680	-	Anae109_1818	-	glycosyl transferase family protein
1802	 71.12	0	2057710..2058696	-	328	153004681	-	Anae109_1819	-	hypothetical protein
1803	 68.07	-1	2058693..2059121	-	142	153004682	-	Anae109_1820	-	hypothetical protein
1804	 70.03	0	2059118..2059831	-	237	153004683	-	Anae109_1821	-	glycosyl transferase family protein
1805	 70.93	0	2059991..2060788	+	265	153004684	-	Anae109_1822	-	glycosyl transferase family protein
1806	 74.01	0	2061252..2065829	+	1525	153004685	-	Anae109_1823	-	cytochrome C family protein
1807	 70.51	0	2065836..2066225	-	129	153004686	-	Anae109_1824	-	hypothetical protein
1808	 71.54	0	2066417..2069392	+	991	153004687	-	Anae109_1825	-	spermine synthase
1809	 74.34	0	2069599..2074536	+	1645	153004688	-	Anae109_1826	-	cytochrome C family protein
1810	 74.58	0	2074605..2076575	+	656	153004689	-	Anae109_1827	-	cytochrome C family protein
1811	 75.91	0	2076606..2078996	-	796	153004690	-	Anae109_1828	-	hypothetical protein
1812	 70.69	0	2079278..2080990	+	570	153004691	-	Anae109_1829	-	hypothetical protein
1813	 70.81	0	2081397..2082773	+	458	153004692	-	Anae109_1830	-	cytochrome c family protein
1814	 74.48	0	2082912..2084345	+	477	153004693	-	Anae109_1831	-	hypothetical protein
1815	 70.85	0	2084349..2086547	+	732	153004694	-	Anae109_1832	-	hypothetical protein
1816	 68.24	-1	2086567..2087139	+	190	153004695	-	Anae109_1833	-	putative lipoprotein
1817	 72.05	0	2087111..2088280	+	389	153004696	-	Anae109_1834	-	putative lipoprotein
1818	 69.91	0	2088473..2090227	+	584	153004697	-	Anae109_1835	-	PpiC-type peptidyl-prolyl cis-trans isomerase
1819	 70.01	0	2090242..2092218	+	658	153004698	-	Anae109_1836	-	cytochrome C family protein
1820	 69.77	0	2092215..2093504	+	429	153004699	-	Anae109_1837	-	cytochrome C family protein
1821	 70.15	0	2093510..2094400	+	296	153004700	-	Anae109_1838	-	NHL repeat-containing protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.