IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1678	 76.22	0	1905818..1906843	-	341	153004557	-	Anae109_1694	-	ABC transporter related
1679	 76.62	0	1906840..1907643	-	267	153004558	-	Anae109_1695	-	binding-protein-dependent transport systems inner membrane component
1680	 76.26	0	1907640..1908515	-	291	153004559	-	Anae109_1696	-	binding-protein-dependent transport systems inner membrane component
1681	 77.38	+1	1908512..1909855	-	447	153004560	-	Anae109_1697	-	extracellular solute-binding protein
1682	 74.47	0	1910121..1910402	-	93	153004561	-	Anae109_1698	-	YciI-like protein
1683	 75.90	0	1910420..1911004	-	194	153004562	-	Anae109_1699	-	pyridoxal 5'-phosphate synthase
1684	 73.69	0	1912003..1913169	+	388	153004563	-	Anae109_1700	-	HNH endonuclease
1685	 75.82	0	1913462..1914007	+	181	153004564	-	Anae109_1701	-	hypothetical protein
1686	 78.18	+1	1913925..1915400	-	491	153004565	-	Anae109_1702	-	TPR repeat-containing protein
1687	 74.45	0	1915557..1916417	-	286	153004566	-	Anae109_1703	-	coproporphyrinogen III oxidase
1688	 71.21	0	1916653..1918281	+	542	153004567	-	Anae109_1704	-	peptide chain release factor 3
1689	 70.50	0	1918396..1919724	-	442	153004568	-	Anae109_1705	-	major facilitator transporter
1690	 79.29	+1	1920127..1920831	-	234	153004569	-	Anae109_1706	-	NAD-dependent epimerase/dehydratase
1691	 73.40	0	1920962..1921540	+	192	153004570	-	Anae109_1707	-	LemA family protein
1692	 79.01	+1	1921540..1923435	+	631	153004571	-	Anae109_1708	-	peptidase M48 Ste24p
1693	 77.72	+1	1923613..1924743	+	376	153004572	-	Anae109_1709	-	type I topoisomerase
1694	 71.90	0	1924755..1925825	-	356	153004573	-	Anae109_1710	-	phospho-2-dehydro-3-deoxyheptonate aldolase
1695	 73.25	0	1926052..1926735	+	227	153004574	-	Anae109_1711	-	hypothetical protein
1696	 70.80	0	1926719..1927879	+	386	153004575	-	Anae109_1712	-	hypothetical protein
1697	 71.60	0	1927881..1929683	+	600	153004576	-	Anae109_1713	-	cytochrome c assembly protein
1698	 76.78	0	1929927..1930994	+	355	153004577	-	Anae109_1714	-	transport-associated
1699	 75.09	0	1931009..1931281	+	90	153004578	-	Anae109_1715	-	transport-associated
1700	 74.37	0	1931480..1932517	-	345	153004579	-	Anae109_1716	-	hypothetical protein
1701	 69.87	0	1932658..1933500	+	280	153004580	-	Anae109_1717	-	hypothetical protein
1702	 70.37	0	1933650..1933946	+	98	153004581	-	Anae109_1718	-	hypothetical protein
1703	 69.41	-1	1934010..1935137	-	375	153004582	-	Anae109_1719	-	phosphoserine aminotransferase
1704	 75.68	0	1935360..1936724	-	454	153004583	-	Anae109_1720	-	major facilitator transporter
1705	 75.74	0	1936721..1937161	-	146	153004584	-	Anae109_1721	-	hypothetical protein
1706	 75.13	0	1937225..1939516	-	763	153004585	-	Anae109_1722	-	GAF sensor signal transduction histidine kinase
1707	 77.87	+1	1939919..1940266	+	115	153004586	-	Anae109_1723	-	BFD/(2Fe-2S)-binding domain-containing protein
1708	 77.28	+1	1940304..1944965	+	1553	153004587	-	Anae109_1724	-	DEAD/DEAH box helicase domain-containing protein
1709	 77.39	+1	1944980..1945828	+	282	153004588	-	Anae109_1725	-	DNA-(apurinic or apyrimidinic site) lyase
1710	 71.49	0	1945813..1946247	+	144	153004589	-	Anae109_1726	-	cupin 2 domain-containing protein
1711	 76.61	0	1946264..1946947	-	227	153004590	-	Anae109_1727	-	Rieske (2Fe-2S) domain-containing protein
1712	 73.29	0	1948002..1948514	+	170	153004591	-	Anae109_1729	-	hypothetical protein
1713	 80.38	+1	1948511..1949203	+	230	153004592	-	Anae109_1730	-	hypothetical protein
1714	 74.37	0	1949225..1950172	-	315	153004593	-	Anae109_1731	-	cation diffusion facilitator family transporter
1715	 68.10	-1	1950297..1951481	-	394	153004594	-	Anae109_1732	-	diphosphate--fructose-6-phosphate 1-phosphotransferase
1716	 74.45	0	1951555..1953327	+	590	153004595	-	Anae109_1733	-	potassium efflux system protein
1717	 69.73	0	1953507..1954256	-	249	153004596	-	Anae109_1734	-	hypothetical protein
1718	 77.71	+1	1954324..1956234	-	636	153004597	-	Anae109_1735	-	SARP family transcriptional regulator
1719	 76.61	0	1956371..1957768	+	465	153004598	-	Anae109_1736	-	TPR repeat-containing protein
1720	 77.11	+1	1957799..1958890	+	363	153004599	-	Anae109_1737	-	Cys/Met metabolism pyridoxal-phosphate-dependent protein
1721	 73.08	0	1959147..1960097	+	316	153004600	-	Anae109_1738	-	Ig domain-containing protein
1722	 78.54	+1	1960121..1960735	-	204	153004601	-	Anae109_1739	-	DTW domain-containing protein
1723	 78.77	+1	1960892..1961494	+	200	153004602	-	Anae109_1740	-	hypothetical protein
1724	 71.22	0	1961491..1961973	+	160	153004603	-	Anae109_1741	-	ybaK/ebsC protein
1725	 71.84	0	1962339..1963634	+	431	153004604	-	Anae109_1742	-	hypothetical protein
1726	 74.43	0	1963870..1964397	+	175	153004605	-	Anae109_1743	-	ribonuclease H
1727	 74.47	0	1964747..1966195	+	482	153004606	-	Anae109_1744	-	aminoacyl-histidine dipeptidase
1728	 73.16	0	1966315..1967469	+	384	153004607	-	Anae109_1745	-	hypothetical protein
1729	 78.23	+1	1967466..1967906	+	146	153004608	-	Anae109_1746	-	peptidoglycan binding domain-containing protein
1730	 73.12	0	1968014..1968199	+	61	153004609	-	Anae109_1747	-	hypothetical protein
1731	 74.80	0	1968297..1968542	+	81	153004610	-	Anae109_1748	-	hypothetical protein
1732	 71.30	0	1968610..1968933	-	107	153004611	-	Anae109_1749	-	peptidylprolyl isomerase FKBP-type
1733	 71.78	0	1969125..1969652	-	175	153004612	-	Anae109_1750	-	rubrerythrin
1734	 76.84	0	1969752..1970822	+	356	153004613	-	Anae109_1751	-	phospholipid/glycerol acyltransferase
1735	 76.58	0	1970798..1971160	-	120	153004614	-	Anae109_1752	-	hypothetical protein
1736	 72.40	0	1971363..1972931	+	522	153004615	-	Anae109_1753	-	putative alpha-isopropylmalate/homocitrate synthase family transferase
1737	 73.62	0	1972928..1973992	+	354	153004616	-	Anae109_1754	-	3-isopropylmalate dehydrogenase
1738	 70.78	0	1974185..1975666	+	493	153004617	-	Anae109_1755	-	peptidase M48 Ste24p
1739	 78.32	+1	1975686..1976663	+	325	153004618	-	Anae109_1756	-	aldo/keto reductase
1740	 74.06	0	1977268..1979337	-	689	153004619	-	Anae109_1757	-	translation elongation factor G
1741	 72.83	0	1979586..1980185	+	199	153004620	-	Anae109_1758	-	hypothetical protein
1742	 71.93	0	1980196..1981791	-	531	153004621	-	Anae109_1759	-	Na+ symporter
1743	 70.75	0	1981829..1983199	+	456	153004622	-	Anae109_1760	-	tryptophanase
1744	 77.94	+1	1983321..1983737	-	138	153004623	-	Anae109_1761	-	type II and III secretion system protein domain-containing protein
1745	 74.01	0	1983778..1984512	+	244	153004624	-	Anae109_1762	-	hypothetical protein
1746	 77.87	+1	1984523..1985281	+	252	153004625	-	Anae109_1763	-	hypothetical protein
1747	 72.45	0	1985315..1985902	-	195	153004626	-	Anae109_1764	-	hemerythrin-like metal-binding protein
1748	 75.73	0	1986179..1986961	-	260	153004627	-	Anae109_1765	-	phosphomethylpyrimidine kinase
1749	 74.15	0	1987061..1989532	+	823	153004628	-	Anae109_1766	-	glycoside hydrolase family protein
1750	 70.20	0	1989782..1991734	+	650	153004629	-	Anae109_1767	-	AMP-dependent synthetase and ligase
1751	 74.69	0	1992046..1992618	+	190	153004630	-	Anae109_1768	-	hypothetical protein
1752	 75.58	0	1992676..1992933	+	85	153004631	-	Anae109_1769	-	hypothetical protein
1753	 76.05	0	1993398..1994228	+	276	153004632	-	Anae109_1770	-	hypothetical protein
1754	 76.62	0	1994247..1997018	+	923	153004633	-	Anae109_1771	-	PAS/PAC sensor hybrid histidine kinase
1755	 76.09	0	1997069..1997758	+	229	153004634	-	Anae109_1772	-	ABC transporter related
1756	 78.58	+1	1997761..2000286	+	841	153004635	-	Anae109_1773	-	hypothetical protein
1757	 76.91	0	2000273..2001385	+	370	153004636	-	Anae109_1774	-	hypothetical protein
1758	 71.30	0	2001455..2003182	+	575	153004637	-	Anae109_1775	-	bifunctional isocitrate dehydrogenase kinase/phosphatase protein
1759	 78.09	+1	2003225..2004808	-	527	153004638	-	Anae109_1776	-	serine/threonine protein kinase
1760	 78.67	+1	2004817..2006949	-	710	153004639	-	Anae109_1777	-	TPR repeat-containing protein
1761	 74.37	0	2006930..2010319	-	1129	153004640	-	Anae109_1778	-	glycosyl transferase family protein
1762	 75.35	0	2010448..2011311	-	287	153004641	-	Anae109_1779	-	hypothetical protein
1763	 73.18	0	2011563..2013206	+	547	153004642	-	Anae109_1780	-	phosphoglucomutase
1764	 77.61	+1	2013277..2013861	-	194	153004643	-	Anae109_1781	-	kinase-like protein
1765	 78.17	+1	2013895..2014737	+	280	153004644	-	Anae109_1782	-	3-beta hydroxysteroid dehydrogenase/isomerase
1766	 76.97	0	2014782..2015237	-	151	153004645	-	Anae109_1783	-	hypothetical protein
1767	 66.24	-1	2015516..2015752	+	78	153004646	-	Anae109_1784	-	hypothetical protein
1768	 70.57	0	2015911..2017779	+	622	153004647	-	Anae109_1785	-	peptidyl-dipeptidase A
1769	 64.79	-2	2017873..2018085	-	70	153004648	-	Anae109_1786	-	CsbD family protein
1770	 70.97	0	2018216..2021350	-	1044	153004649	-	Anae109_1787	-	acriflavin resistance protein
1771	 77.17	+1	2021347..2022498	-	383	153004650	-	Anae109_1788	-	RND family efflux transporter MFP subunit
1772	 78.54	+1	2022495..2023976	-	493	153004651	-	Anae109_1789	-	outer membrane efflux protein
1773	 70.74	0	2024040..2024309	-	89	153004652	-	Anae109_1790	-	glutaredoxin 3
1774	 74.76	0	2024383..2025309	-	308	153004653	-	Anae109_1791	-	peptidase M48 Ste24p
1775	 73.07	0	2025383..2026288	-	301	153004654	-	Anae109_1792	-	LysR family transcriptional regulator
1776	 66.77	-1	2026394..2027350	+	318	153004655	-	Anae109_1793	-	integral membrane protein TerC
1777	 71.15	0	2027370..2027681	-	103	153004656	-	Anae109_1794	-	hypothetical protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.