IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1642	 70.90	0	1863073..1863474	-	133	153004521	-	Anae109_1658	-	hypothetical protein
1643	 70.47	0	1864511..1866322	+	603	153004522	-	Anae109_1659	-	hypothetical protein
1644	 70.39	0	1866528..1867010	+	160	153004523	-	Anae109_1660	-	hypothetical protein
1645	 65.54	-2	1867158..1868489	+	443	153004524	-	Anae109_1661	-	extracellular solute-binding protein
1646	 72.03	0	1868627..1869670	+	347	153004525	-	Anae109_1662	-	ABC transporter related
1647	 70.74	0	1869661..1870593	+	310	153004526	-	Anae109_1663	-	binding-protein-dependent transport systems inner membrane component
1648	 66.78	-1	1870611..1871456	+	281	153004527	-	Anae109_1664	-	binding-protein-dependent transport systems inner membrane component
1649	 75.73	0	1871474..1872952	+	492	153004528	-	Anae109_1665	-	methylmalonate-semialdehyde dehydrogenase
1650	 73.73	0	1873011..1873661	+	216	153004529	-	Anae109_1666	-	NADPH-dependent FMN reductase
1651	 77.69	+1	1873678..1875474	-	598	153004530	-	Anae109_1667	-	UBA/THIF-type NAD/FAD binding protein
1652	 72.31	0	1875693..1876082	-	129	153004531	-	Anae109_1668	-	hypothetical protein
1653	 74.43	0	1876247..1877869	+	540	153004532	-	Anae109_1669	-	hemerythrin HHE cation binding domain-containing protein
1654	 76.04	0	1878029..1878508	-	159	153004533	-	Anae109_1670	-	outer membrane lipoprotein, putative
1655	 76.37	0	1878778..1881045	+	755	153004534	-	Anae109_1671	-	histidine kinase
1656	 75.51	0	1881042..1881776	-	244	153004535	-	Anae109_1672	-	phosphoesterase PA-phosphatase related
1657	 73.57	0	1881990..1882496	-	168	153004536	-	Anae109_1673	-	blue (type1) copper domain-containing protein
1658	 74.17	0	1882734..1883519	-	261	153004537	-	Anae109_1674	-	3-hydroxybutyrate dehydrogenase
1659	 71.43	0	1883516..1884460	-	314	153004538	-	Anae109_1675	-	inner-membrane translocator
1660	 69.21	-1	1884457..1885320	-	287	153004539	-	Anae109_1676	-	inner-membrane translocator
1661	 68.64	-1	1885327..1886541	-	404	153004540	-	Anae109_1677	-	ABC branched-chain amino acid transporter, periplasmic ligand biinding protein
1662	 72.92	0	1886564..1887283	-	239	153004541	-	Anae109_1678	-	ABC transporter related
1663	 73.31	0	1887280..1888032	-	250	153004542	-	Anae109_1679	-	ABC transporter related
1664	 73.60	0	1888302..1892093	-	1263	153004543	-	Anae109_1680	-	cell wall/surface repeat-containing protein
1665	 72.03	0	1892447..1893397	-	316	153004544	-	Anae109_1681	-	aldo/keto reductase
1666	 73.47	0	1893613..1894185	-	190	153004545	-	Anae109_1682	-	hypothetical protein
1667	 71.46	0	1894185..1895039	-	284	153004546	-	Anae109_1683	-	metallophosphoesterase
1668	 75.30	0	1895389..1895805	+	138	153004547	-	Anae109_1684	-	GreA/GreB family elongation factor
1669	 74.41	0	1895840..1896304	-	154	153004548	-	Anae109_1685	-	hemerythrin HHE cation binding domain-containing protein
1670	 73.13	0	1896298..1896993	-	231	153004549	-	Anae109_1686	-	hypothetical protein
1671	 75.65	0	1897105..1898106	+	333	153004550	-	Anae109_1687	-	sigma-54 dependent trancsriptional regulator
1672	 73.24	0	1898157..1898795	+	212	153004551	-	Anae109_1688	-	hypothetical protein
1673	 74.18	0	1898782..1899420	+	212	153004552	-	Anae109_1689	-	hypothetical protein
1674	 78.99	+1	1899515..1900861	+	448	153004553	-	Anae109_1690	-	outer membrane efflux protein
1675	 77.28	+1	1900858..1901865	+	335	153004554	-	Anae109_1691	-	RND family efflux transporter MFP subunit
1676	 73.16	0	1901862..1905218	+	1118	153004555	-	Anae109_1692	-	acriflavin resistance protein
1677	 71.30	0	1905364..1905687	-	107	153004556	-	Anae109_1693	-	carboxymuconolactone decarboxylase
1678	 76.22	0	1905818..1906843	-	341	153004557	-	Anae109_1694	-	ABC transporter related
1679	 76.62	0	1906840..1907643	-	267	153004558	-	Anae109_1695	-	binding-protein-dependent transport systems inner membrane component
1680	 76.26	0	1907640..1908515	-	291	153004559	-	Anae109_1696	-	binding-protein-dependent transport systems inner membrane component
1681	 77.38	+1	1908512..1909855	-	447	153004560	-	Anae109_1697	-	extracellular solute-binding protein
1682	 74.47	0	1910121..1910402	-	93	153004561	-	Anae109_1698	-	YciI-like protein
1683	 75.90	0	1910420..1911004	-	194	153004562	-	Anae109_1699	-	pyridoxal 5'-phosphate synthase
1684	 73.69	0	1912003..1913169	+	388	153004563	-	Anae109_1700	-	HNH endonuclease
1685	 75.82	0	1913462..1914007	+	181	153004564	-	Anae109_1701	-	hypothetical protein
1686	 78.18	+1	1913925..1915400	-	491	153004565	-	Anae109_1702	-	TPR repeat-containing protein
1687	 74.45	0	1915557..1916417	-	286	153004566	-	Anae109_1703	-	coproporphyrinogen III oxidase
1688	 71.21	0	1916653..1918281	+	542	153004567	-	Anae109_1704	-	peptide chain release factor 3
1689	 70.50	0	1918396..1919724	-	442	153004568	-	Anae109_1705	-	major facilitator transporter
1690	 79.29	+1	1920127..1920831	-	234	153004569	-	Anae109_1706	-	NAD-dependent epimerase/dehydratase
1691	 73.40	0	1920962..1921540	+	192	153004570	-	Anae109_1707	-	LemA family protein
1692	 79.01	+1	1921540..1923435	+	631	153004571	-	Anae109_1708	-	peptidase M48 Ste24p
1693	 77.72	+1	1923613..1924743	+	376	153004572	-	Anae109_1709	-	type I topoisomerase
1694	 71.90	0	1924755..1925825	-	356	153004573	-	Anae109_1710	-	phospho-2-dehydro-3-deoxyheptonate aldolase
1695	 73.25	0	1926052..1926735	+	227	153004574	-	Anae109_1711	-	hypothetical protein
1696	 70.80	0	1926719..1927879	+	386	153004575	-	Anae109_1712	-	hypothetical protein
1697	 71.60	0	1927881..1929683	+	600	153004576	-	Anae109_1713	-	cytochrome c assembly protein
1698	 76.78	0	1929927..1930994	+	355	153004577	-	Anae109_1714	-	transport-associated
1699	 75.09	0	1931009..1931281	+	90	153004578	-	Anae109_1715	-	transport-associated
1700	 74.37	0	1931480..1932517	-	345	153004579	-	Anae109_1716	-	hypothetical protein
1701	 69.87	0	1932658..1933500	+	280	153004580	-	Anae109_1717	-	hypothetical protein
1702	 70.37	0	1933650..1933946	+	98	153004581	-	Anae109_1718	-	hypothetical protein
1703	 69.41	-1	1934010..1935137	-	375	153004582	-	Anae109_1719	-	phosphoserine aminotransferase
1704	 75.68	0	1935360..1936724	-	454	153004583	-	Anae109_1720	-	major facilitator transporter
1705	 75.74	0	1936721..1937161	-	146	153004584	-	Anae109_1721	-	hypothetical protein
1706	 75.13	0	1937225..1939516	-	763	153004585	-	Anae109_1722	-	GAF sensor signal transduction histidine kinase
1707	 77.87	+1	1939919..1940266	+	115	153004586	-	Anae109_1723	-	BFD/(2Fe-2S)-binding domain-containing protein
1708	 77.28	+1	1940304..1944965	+	1553	153004587	-	Anae109_1724	-	DEAD/DEAH box helicase domain-containing protein
1709	 77.39	+1	1944980..1945828	+	282	153004588	-	Anae109_1725	-	DNA-(apurinic or apyrimidinic site) lyase
1710	 71.49	0	1945813..1946247	+	144	153004589	-	Anae109_1726	-	cupin 2 domain-containing protein
1711	 76.61	0	1946264..1946947	-	227	153004590	-	Anae109_1727	-	Rieske (2Fe-2S) domain-containing protein
1712	 73.29	0	1948002..1948514	+	170	153004591	-	Anae109_1729	-	hypothetical protein
1713	 80.38	+1	1948511..1949203	+	230	153004592	-	Anae109_1730	-	hypothetical protein
1714	 74.37	0	1949225..1950172	-	315	153004593	-	Anae109_1731	-	cation diffusion facilitator family transporter
1715	 68.10	-1	1950297..1951481	-	394	153004594	-	Anae109_1732	-	diphosphate--fructose-6-phosphate 1-phosphotransferase
1716	 74.45	0	1951555..1953327	+	590	153004595	-	Anae109_1733	-	potassium efflux system protein
1717	 69.73	0	1953507..1954256	-	249	153004596	-	Anae109_1734	-	hypothetical protein
1718	 77.71	+1	1954324..1956234	-	636	153004597	-	Anae109_1735	-	SARP family transcriptional regulator
1719	 76.61	0	1956371..1957768	+	465	153004598	-	Anae109_1736	-	TPR repeat-containing protein
1720	 77.11	+1	1957799..1958890	+	363	153004599	-	Anae109_1737	-	Cys/Met metabolism pyridoxal-phosphate-dependent protein
1721	 73.08	0	1959147..1960097	+	316	153004600	-	Anae109_1738	-	Ig domain-containing protein
1722	 78.54	+1	1960121..1960735	-	204	153004601	-	Anae109_1739	-	DTW domain-containing protein
1723	 78.77	+1	1960892..1961494	+	200	153004602	-	Anae109_1740	-	hypothetical protein
1724	 71.22	0	1961491..1961973	+	160	153004603	-	Anae109_1741	-	ybaK/ebsC protein
1725	 71.84	0	1962339..1963634	+	431	153004604	-	Anae109_1742	-	hypothetical protein
1726	 74.43	0	1963870..1964397	+	175	153004605	-	Anae109_1743	-	ribonuclease H
1727	 74.47	0	1964747..1966195	+	482	153004606	-	Anae109_1744	-	aminoacyl-histidine dipeptidase
1728	 73.16	0	1966315..1967469	+	384	153004607	-	Anae109_1745	-	hypothetical protein
1729	 78.23	+1	1967466..1967906	+	146	153004608	-	Anae109_1746	-	peptidoglycan binding domain-containing protein
1730	 73.12	0	1968014..1968199	+	61	153004609	-	Anae109_1747	-	hypothetical protein
1731	 74.80	0	1968297..1968542	+	81	153004610	-	Anae109_1748	-	hypothetical protein
1732	 71.30	0	1968610..1968933	-	107	153004611	-	Anae109_1749	-	peptidylprolyl isomerase FKBP-type
1733	 71.78	0	1969125..1969652	-	175	153004612	-	Anae109_1750	-	rubrerythrin
1734	 76.84	0	1969752..1970822	+	356	153004613	-	Anae109_1751	-	phospholipid/glycerol acyltransferase
1735	 76.58	0	1970798..1971160	-	120	153004614	-	Anae109_1752	-	hypothetical protein
1736	 72.40	0	1971363..1972931	+	522	153004615	-	Anae109_1753	-	putative alpha-isopropylmalate/homocitrate synthase family transferase
1737	 73.62	0	1972928..1973992	+	354	153004616	-	Anae109_1754	-	3-isopropylmalate dehydrogenase
1738	 70.78	0	1974185..1975666	+	493	153004617	-	Anae109_1755	-	peptidase M48 Ste24p
1739	 78.32	+1	1975686..1976663	+	325	153004618	-	Anae109_1756	-	aldo/keto reductase
1740	 74.06	0	1977268..1979337	-	689	153004619	-	Anae109_1757	-	translation elongation factor G
1741	 72.83	0	1979586..1980185	+	199	153004620	-	Anae109_1758	-	hypothetical protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.