IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1092	 75.50	0	1248564..1251608	-	1014	153003971	-	Anae109_1104	-	(glutamate--ammonia-ligase) adenylyltransferase
1093	 72.20	0	1251799..1253226	-	475	153003972	-	Anae109_1105	-	two component, sigma54 specific, Fis family transcriptional regulator
1094	 71.21	0	1253293..1255428	-	711	153003973	-	Anae109_1106	-	glycogen debranching enzyme GlgX
1095	 77.33	+1	1255634..1256749	+	371	153003974	-	Anae109_1107	-	glycosyl transferase group 1
1096	 68.78	-1	1257119..1258018	+	299	153003975	-	Anae109_1108	-	RNA polymerase sigma-70
1097	 73.33	0	1258097..1258861	-	254	153003976	-	Anae109_1109	-	short-chain dehydrogenase/reductase SDR
1098	 75.31	0	1258979..1260505	-	508	153003977	-	Anae109_1110	-	integral membrane sensor signal transduction histidine kinase
1099	 76.51	0	1260502..1261182	-	226	153003978	-	Anae109_1111	-	hypothetical protein
1100	 74.15	0	1261179..1262582	-	467	153003979	-	Anae109_1112	-	surface antigen
1101	 77.62	+1	1262645..1264507	-	620	153003980	-	Anae109_1113	-	protein kinase
1102	 76.65	0	1264748..1265989	+	413	153003981	-	Anae109_1114	-	hypothetical protein
1103	 69.54	0	1265990..1267588	+	532	153003982	-	Anae109_1115	-	hypothetical protein
1104	 76.56	0	1267673..1268299	+	208	153003983	-	Anae109_1116	-	hypothetical protein
1105	 71.47	0	1268419..1269981	+	520	153003984	-	Anae109_1117	-	lysyl-tRNA synthetase
1106	 73.51	0	1269983..1271968	+	661	153003985	-	Anae109_1118	-	hypothetical protein
1107	 72.89	0	1271968..1272642	+	224	153003986	-	Anae109_1119	-	ABC transporter related
1108	 68.41	-1	1272696..1275158	+	820	153003987	-	Anae109_1120	-	surface antigen (D15)
1109	 68.96	-1	1275182..1275748	+	188	153003988	-	Anae109_1121	-	outer membrane chaperone Skp (OmpH)
1110	 73.84	0	1275756..1276814	+	352	153003989	-	Anae109_1122	-	UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
1111	 70.02	0	1276811..1277287	+	158	153003990	-	Anae109_1123	-	beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
1112	 73.26	0	1277306..1278079	+	257	153003991	-	Anae109_1124	-	acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
1113	 74.75	0	1278246..1279061	+	271	153003992	-	Anae109_1125	-	hypothetical protein
1114	 77.43	+1	1279058..1279345	+	95	153003993	-	Anae109_1126	-	hypothetical protein
1115	 76.44	0	1279360..1279584	+	74	153003994	-	Anae109_1127	-	hypothetical protein
1116	 70.94	0	1279731..1280783	+	350	153003995	-	Anae109_1128	-	uroporphyrinogen decarboxylase
1117	 69.56	0	1280792..1282174	+	460	153003996	-	Anae109_1129	-	coproporphyrinogen III oxidase
1118	 75.00	0	1282302..1283261	+	319	153003997	-	Anae109_1130	-	ferrochelatase
1119	 76.84	0	1283356..1284210	+	284	153003998	-	Anae109_1131	-	HAD family hydrolase
1120	 77.89	+1	1284207..1285658	+	483	153003999	-	Anae109_1132	-	exodeoxyribonuclease VII, large subunit
1121	 71.43	0	1285701..1285973	+	90	153004000	-	Anae109_1133	-	exodeoxyribonuclease VII, small subunit
1122	 67.39	-1	1285980..1286396	+	138	153004001	-	Anae109_1134	-	response regulator receiver protein
1123	 75.78	0	1286446..1287345	+	299	153004002	-	Anae109_1135	-	polyprenyl synthetase
1124	 72.22	0	1287360..1289267	+	635	153004003	-	Anae109_1136	-	deoxyxylulose-5-phosphate synthase
1125	 75.63	0	1289289..1290047	+	252	153004004	-	Anae109_1137	-	hemolysin A
1126	 71.12	0	1290214..1290729	+	171	153004005	-	Anae109_1138	-	hypothetical protein
1127	 69.54	0	1290733..1292403	+	556	153004006	-	Anae109_1139	-	NusA antitermination factor
1128	 71.59	0	1292400..1292663	+	87	153004007	-	Anae109_1140	-	hypothetical protein
1129	 72.26	0	1292675..1295587	+	970	153004008	-	Anae109_1141	-	translation initiation factor IF-2
1130	 68.86	-1	1295847..1296257	+	136	153004009	-	Anae109_1142	-	hypothetical protein
1131	 71.54	0	1296254..1296622	+	122	153004010	-	Anae109_1143	-	ribosome-binding factor A
1132	 78.06	+1	1296619..1297566	+	315	153004011	-	Anae109_1144	-	tRNA pseudouridine synthase B
1133	 65.56	-2	1297679..1297948	+	89	153004012	-	Anae109_1145	-	ribosomal protein S15
1134	 68.60	-1	1298212..1300380	+	722	153004013	-	Anae109_1146	-	polynucleotide phosphorylase/polyadenylase
1135	 77.03	+1	1300441..1300884	+	147	153004014	-	Anae109_1147	-	deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
1136	 72.27	0	1300900..1302219	+	439	153004015	-	Anae109_1148	-	adenylosuccinate lyase
1137	 81.48	+2	1302229..1302768	+	179	153004016	-	Anae109_1149	-	hypothetical protein
1138	 79.72	+1	1302756..1303544	-	262	153004017	-	Anae109_1150	-	BioH protein, putative
1139	 68.85	-1	1303557..1304519	-	320	153004018	-	Anae109_1151	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
1140	 77.78	+1	1304625..1305317	+	230	153004019	-	Anae109_1152	-	tRNA/rRNA methyltransferase (SpoU)
1141	 67.70	-1	1305333..1305623	-	96	153004020	-	Anae109_1153	-	hypothetical protein
1142	 74.24	0	1305662..1306783	-	373	153004021	-	Anae109_1154	-	2-alkenal reductase
1143	 78.76	+1	1306905..1307210	-	101	153004022	-	Anae109_1155	-	hypothetical protein
1144	 78.10	+1	1307297..1307926	-	209	153004023	-	Anae109_1156	-	phosphoglycolate phosphatase
1145	 77.45	+1	1307923..1309443	-	506	153004024	-	Anae109_1157	-	OmpA/MotB domain-containing protein
1146	 75.87	0	1309548..1310492	-	314	153004025	-	Anae109_1158	-	metal dependent phosphohydrolase
1147	 77.78	+1	1310489..1310848	-	119	153004026	-	Anae109_1159	-	response regulator receiver protein
1148	 77.23	+1	1310877..1311548	-	223	153004027	-	Anae109_1160	-	molybdopterin converting factor, subunit 1
1149	 75.86	0	1311568..1312611	-	347	153004028	-	Anae109_1161	-	putative membrane-associated zinc metalloprotease
1150	 77.12	+1	1312608..1313162	-	184	153004029	-	Anae109_1162	-	AMMECR1 domain-containing protein
1151	 75.65	0	1313159..1313581	-	140	153004030	-	Anae109_1163	-	NUDIX hydrolase
1152	 78.22	+1	1313637..1314830	-	397	153004031	-	Anae109_1164	-	hypothetical protein
1153	 71.21	0	1315013..1315276	+	87	153004032	-	Anae109_1165	-	hypothetical protein
1154	 71.82	0	1315423..1315965	+	180	153004033	-	Anae109_1166	-	carbonic anhydrase
1155	 78.25	+1	1316046..1317659	+	537	153004034	-	Anae109_1167	-	phospholipase D/transphosphatidylase
1156	 75.30	0	1317837..1318253	-	138	153004035	-	Anae109_1168	-	glyoxalase/bleomycin resistance protein/dioxygenase
1157	 72.61	0	1318279..1320213	-	644	153004036	-	Anae109_1169	-	oligoendopeptidase F
1158	 69.54	0	1320616..1323537	-	973	153004037	-	Anae109_1170	-	excinuclease ABC, A subunit
1159	 75.85	0	1323686..1324687	+	333	153004038	-	Anae109_1171	-	hypothetical protein
1160	 75.74	0	1324684..1325598	+	304	153004039	-	Anae109_1172	-	hypothetical protein
1161	 70.74	0	1325681..1326907	+	408	153004040	-	Anae109_1173	-	extracellular ligand-binding receptor
1162	 73.17	0	1326926..1327786	+	286	153004041	-	Anae109_1174	-	inner-membrane translocator
1163	 75.38	0	1327789..1328775	+	328	153004042	-	Anae109_1175	-	inner-membrane translocator
1164	 74.31	0	1328772..1329530	+	252	153004043	-	Anae109_1176	-	ABC transporter related
1165	 76.65	0	1329527..1330237	+	236	153004044	-	Anae109_1177	-	ABC transporter related
1166	 71.33	0	1330350..1330907	+	185	153004045	-	Anae109_1178	-	putative lipoprotein transmembrane
1167	 71.99	0	1330975..1332120	+	381	153004046	-	Anae109_1179	-	acyl-CoA dehydrogenase domain-containing protein
1168	 75.16	0	1332132..1332449	+	105	153004047	-	Anae109_1180	-	CutA1 divalent ion tolerance protein
1169	 70.48	0	1332690..1334420	+	576	153004048	-	Anae109_1181	-	hypothetical protein
1170	 73.33	0	1334522..1334866	-	114	153004049	-	Anae109_1182	-	hypothetical protein
1171	 77.24	+1	1334904..1336331	+	475	153004050	-	Anae109_1183	-	protein kinase
1172	 73.84	0	1336516..1337700	-	394	153004051	-	Anae109_1184	-	response regulator receiver modulated metal dependent phosphohydrolase
1173	 69.22	-1	1337780..1338874	-	364	153004052	-	Anae109_1185	-	transcription termination factor Rho
1174	 76.24	0	1339504..1341999	-	831	153004053	-	Anae109_1186	-	signal peptide peptidase SppA, 36K type
1175	 68.25	-1	1342135..1342956	-	273	153004054	-	Anae109_1187	-	thymidylate synthase, flavin-dependent
1176	 74.79	0	1343052..1343531	+	159	153004055	-	Anae109_1188	-	thioesterase superfamily protein
1177	 74.23	0	1343558..1344046	-	162	153004056	-	Anae109_1189	-	FHA domain-containing protein
1178	 75.61	0	1344167..1345876	-	569	153004057	-	Anae109_1190	-	aldehyde dehydrogenase
1179	 74.18	0	1345944..1346795	-	283	153004058	-	Anae109_1191	-	metallophosphoesterase
1180	 76.21	0	1346917..1347828	-	303	153004059	-	Anae109_1192	-	hypothetical protein
1181	 66.67	-1	1347994..1348200	-	68	153004060	-	Anae109_1193	-	helix-turn-helix domain-containing protein
1182	 68.28	-1	1348326..1348511	+	61	153004061	-	Anae109_1194	-	AhpC/TSA family protein
1183	 65.72	-1	1348521..1348838	+	105	153004062	-	Anae109_1195	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
1184	 71.49	0	1348849..1349283	+	144	153004063	-	Anae109_1196	-	hypothetical protein
1185	 73.81	0	1349302..1349553	+	83	153004064	-	Anae109_1197	-	hypothetical protein
1186	 75.15	0	1349600..1351120	-	506	153004065	-	Anae109_1198	-	hypothetical protein
1187	 76.82	0	1351296..1352309	+	337	153004066	-	Anae109_1199	-	hypothetical protein
1188	 75.99	0	1352412..1353065	+	217	153004067	-	Anae109_1200	-	hemolysin III family channel protein
1189	 74.60	0	1353085..1354092	-	335	153004068	-	Anae109_1201	-	GTPase-like protein
1190	 77.23	+1	1354174..1354845	-	223	153004069	-	Anae109_1202	-	haloacid dehalogenase, type II
1191	 72.82	0	1354968..1356284	+	438	153004070	-	Anae109_1203	-	arginine biosynthesis bifunctional protein ArgJ
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.