IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1049	 67.77	-1	1201535..1203343	+	602	153003928	-	Anae109_1061	-	sigma-54 dependent trancsriptional regulator
1050	 69.21	-1	1203392..1204297	-	301	153003929	-	Anae109_1062	-	hypothetical protein
1051	 71.37	0	1204294..1204548	-	84	153003930	-	Anae109_1063	-	hypothetical protein
1052	 70.19	0	1204562..1205128	-	188	153003931	-	Anae109_1064	-	activator of Hsp90 ATPase 1 family protein
1053	 66.67	-1	1205125..1205499	-	124	153003932	-	Anae109_1065	-	regulatory protein ArsR
1054	 67.83	-1	1205826..1208564	-	912	153003933	-	Anae109_1066	-	hypothetical protein
1055	 59.26	-2	1208970..1209320	+	116	153003934	-	Anae109_1067	-	hypothetical protein
1056	 71.47	0	1209714..1210067	+	117	153003935	-	Anae109_1068	-	DNA binding domain-containing protein
1057	 66.97	-1	1210114..1210770	-	218	153003936	-	Anae109_1069	-	hypothetical protein
1058	 71.89	0	1210794..1211693	-	299	153003937	-	Anae109_1070	-	hypothetical protein
1059	 69.26	-1	1211690..1212268	-	192	153003938	-	Anae109_1071	-	hypothetical protein
1060	 74.20	0	1212426..1213991	+	521	153003939	-	Anae109_1072	-	hypothetical protein
1061	 74.54	0	1213988..1215295	+	435	153003940	-	Anae109_1073	-	hypothetical protein
1062	 74.90	0	1215292..1219455	+	1387	153003941	-	Anae109_1074	-	hypothetical protein
1063	 72.56	0	1219452..1220792	+	446	153003942	-	Anae109_1075	-	hypothetical protein
1064	 71.16	0	1221060..1222238	+	392	153003943	-	Anae109_1076	-	transposase mutator type
1065	 63.42	-2	1222259..1222597	+	112	153003944	-	Anae109_1077	-	hypothetical protein
1066	 68.26	-1	1222718..1223470	+	250	153003945	-	Anae109_1078	-	hypothetical protein
1067	 66.36	-1	1223691..1224020	+	109	153003946	-	Anae109_1079	-	hypothetical protein
1068	 72.39	0	1224274..1225722	+	482	153003947	-	Anae109_1080	-	phage integrase family protein
1069	 74.70	0	1226164..1226412	+	82	153003948	-	Anae109_1081	-	phage transcriptional regulator, AlpA
1070	 73.75	0	1226412..1227329	+	305	153003949	-	Anae109_1082	-	hypothetical protein
1071	 70.39	0	1227330..1228001	+	223	153003950	-	Anae109_1083	-	hypothetical protein
1072	 67.21	-1	1228325..1229239	-	304	153003951	-	Anae109_1084	-	restriction endonuclease
1073	 69.70	0	1229779..1230801	+	340	153003952	-	Anae109_1085	-	hypothetical protein
1074	 68.56	-1	1230839..1231684	+	281	153003953	-	Anae109_1086	-	hypothetical protein
1075	 69.43	-1	1231744..1232286	-	180	153003954	-	Anae109_1087	-	hypothetical protein
1076	 72.04	0	1232761..1233318	-	185	153003955	-	Anae109_1088	-	isochorismatase hydrolase
1077	 75.14	0	1233376..1235028	-	550	153003956	-	Anae109_1089	-	thiamine pyrophosphate protein central region
1078	 67.99	-1	1235124..1235426	-	100	153003957	-	Anae109_1090	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1079	 66.67	-1	1235608..1235796	-	62	153003958	-	Anae109_1091	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1080	 76.12	0	1235938..1236318	-	126	153003959	-	Anae109_1092	-	hypothetical protein
1081	 71.84	0	1236388..1237218	+	276	153003960	-	Anae109_1093	-	ribosomal RNA methyltransferase RrmJ/FtsJ
1082	 70.26	0	1237443..1238693	-	416	153003961	-	Anae109_1094	-	tyrosyl-tRNA synthetase
1083	 72.54	0	1238696..1239529	-	277	153003962	-	Anae109_1095	-	metallophosphoesterase
1084	 77.18	+1	1239526..1240143	-	205	153003963	-	Anae109_1096	-	5-formyltetrahydrofolate cyclo-ligase
1085	 76.43	0	1240533..1241444	+	303	153003964	-	Anae109_1097	-	protein kinase
1086	 78.42	+1	1241562..1242701	-	379	153003965	-	Anae109_1098	-	aminotransferase class V
1087	 69.68	0	1242751..1243878	-	375	153003966	-	Anae109_1099	-	phosphoesterase domain-containing protein
1088	 71.53	0	1243875..1244717	-	280	153003967	-	Anae109_1100	-	apurinic endonuclease Apn1
1089	 68.50	-1	1244927..1245691	-	254	153003968	-	Anae109_1101	-	filamentation induced by cAMP protein Fic
1090	 68.66	-1	1246109..1247062	-	317	153003969	-	Anae109_1102	-	branched-chain amino acid aminotransferase
1091	 74.93	0	1247101..1248528	-	475	153003970	-	Anae109_1103	-	patatin
1092	 75.50	0	1248564..1251608	-	1014	153003971	-	Anae109_1104	-	(glutamate--ammonia-ligase) adenylyltransferase
1093	 72.20	0	1251799..1253226	-	475	153003972	-	Anae109_1105	-	two component, sigma54 specific, Fis family transcriptional regulator
1094	 71.21	0	1253293..1255428	-	711	153003973	-	Anae109_1106	-	glycogen debranching enzyme GlgX
1095	 77.33	+1	1255634..1256749	+	371	153003974	-	Anae109_1107	-	glycosyl transferase group 1
1096	 68.78	-1	1257119..1258018	+	299	153003975	-	Anae109_1108	-	RNA polymerase sigma-70
1097	 73.33	0	1258097..1258861	-	254	153003976	-	Anae109_1109	-	short-chain dehydrogenase/reductase SDR
1098	 75.31	0	1258979..1260505	-	508	153003977	-	Anae109_1110	-	integral membrane sensor signal transduction histidine kinase
1099	 76.51	0	1260502..1261182	-	226	153003978	-	Anae109_1111	-	hypothetical protein
1100	 74.15	0	1261179..1262582	-	467	153003979	-	Anae109_1112	-	surface antigen
1101	 77.62	+1	1262645..1264507	-	620	153003980	-	Anae109_1113	-	protein kinase
1102	 76.65	0	1264748..1265989	+	413	153003981	-	Anae109_1114	-	hypothetical protein
1103	 69.54	0	1265990..1267588	+	532	153003982	-	Anae109_1115	-	hypothetical protein
1104	 76.56	0	1267673..1268299	+	208	153003983	-	Anae109_1116	-	hypothetical protein
1105	 71.47	0	1268419..1269981	+	520	153003984	-	Anae109_1117	-	lysyl-tRNA synthetase
1106	 73.51	0	1269983..1271968	+	661	153003985	-	Anae109_1118	-	hypothetical protein
1107	 72.89	0	1271968..1272642	+	224	153003986	-	Anae109_1119	-	ABC transporter related
1108	 68.41	-1	1272696..1275158	+	820	153003987	-	Anae109_1120	-	surface antigen (D15)
1109	 68.96	-1	1275182..1275748	+	188	153003988	-	Anae109_1121	-	outer membrane chaperone Skp (OmpH)
1110	 73.84	0	1275756..1276814	+	352	153003989	-	Anae109_1122	-	UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
1111	 70.02	0	1276811..1277287	+	158	153003990	-	Anae109_1123	-	beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
1112	 73.26	0	1277306..1278079	+	257	153003991	-	Anae109_1124	-	acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
1113	 74.75	0	1278246..1279061	+	271	153003992	-	Anae109_1125	-	hypothetical protein
1114	 77.43	+1	1279058..1279345	+	95	153003993	-	Anae109_1126	-	hypothetical protein
1115	 76.44	0	1279360..1279584	+	74	153003994	-	Anae109_1127	-	hypothetical protein
1116	 70.94	0	1279731..1280783	+	350	153003995	-	Anae109_1128	-	uroporphyrinogen decarboxylase
1117	 69.56	0	1280792..1282174	+	460	153003996	-	Anae109_1129	-	coproporphyrinogen III oxidase
1118	 75.00	0	1282302..1283261	+	319	153003997	-	Anae109_1130	-	ferrochelatase
1119	 76.84	0	1283356..1284210	+	284	153003998	-	Anae109_1131	-	HAD family hydrolase
1120	 77.89	+1	1284207..1285658	+	483	153003999	-	Anae109_1132	-	exodeoxyribonuclease VII, large subunit
1121	 71.43	0	1285701..1285973	+	90	153004000	-	Anae109_1133	-	exodeoxyribonuclease VII, small subunit
1122	 67.39	-1	1285980..1286396	+	138	153004001	-	Anae109_1134	-	response regulator receiver protein
1123	 75.78	0	1286446..1287345	+	299	153004002	-	Anae109_1135	-	polyprenyl synthetase
1124	 72.22	0	1287360..1289267	+	635	153004003	-	Anae109_1136	-	deoxyxylulose-5-phosphate synthase
1125	 75.63	0	1289289..1290047	+	252	153004004	-	Anae109_1137	-	hemolysin A
1126	 71.12	0	1290214..1290729	+	171	153004005	-	Anae109_1138	-	hypothetical protein
1127	 69.54	0	1290733..1292403	+	556	153004006	-	Anae109_1139	-	NusA antitermination factor
1128	 71.59	0	1292400..1292663	+	87	153004007	-	Anae109_1140	-	hypothetical protein
1129	 72.26	0	1292675..1295587	+	970	153004008	-	Anae109_1141	-	translation initiation factor IF-2
1130	 68.86	-1	1295847..1296257	+	136	153004009	-	Anae109_1142	-	hypothetical protein
1131	 71.54	0	1296254..1296622	+	122	153004010	-	Anae109_1143	-	ribosome-binding factor A
1132	 78.06	+1	1296619..1297566	+	315	153004011	-	Anae109_1144	-	tRNA pseudouridine synthase B
1133	 65.56	-2	1297679..1297948	+	89	153004012	-	Anae109_1145	-	ribosomal protein S15
1134	 68.60	-1	1298212..1300380	+	722	153004013	-	Anae109_1146	-	polynucleotide phosphorylase/polyadenylase
1135	 77.03	+1	1300441..1300884	+	147	153004014	-	Anae109_1147	-	deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
1136	 72.27	0	1300900..1302219	+	439	153004015	-	Anae109_1148	-	adenylosuccinate lyase
1137	 81.48	+2	1302229..1302768	+	179	153004016	-	Anae109_1149	-	hypothetical protein
1138	 79.72	+1	1302756..1303544	-	262	153004017	-	Anae109_1150	-	BioH protein, putative
1139	 68.85	-1	1303557..1304519	-	320	153004018	-	Anae109_1151	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
1140	 77.78	+1	1304625..1305317	+	230	153004019	-	Anae109_1152	-	tRNA/rRNA methyltransferase (SpoU)
1141	 67.70	-1	1305333..1305623	-	96	153004020	-	Anae109_1153	-	hypothetical protein
1142	 74.24	0	1305662..1306783	-	373	153004021	-	Anae109_1154	-	2-alkenal reductase
1143	 78.76	+1	1306905..1307210	-	101	153004022	-	Anae109_1155	-	hypothetical protein
1144	 78.10	+1	1307297..1307926	-	209	153004023	-	Anae109_1156	-	phosphoglycolate phosphatase
1145	 77.45	+1	1307923..1309443	-	506	153004024	-	Anae109_1157	-	OmpA/MotB domain-containing protein
1146	 75.87	0	1309548..1310492	-	314	153004025	-	Anae109_1158	-	metal dependent phosphohydrolase
1147	 77.78	+1	1310489..1310848	-	119	153004026	-	Anae109_1159	-	response regulator receiver protein
1148	 77.23	+1	1310877..1311548	-	223	153004027	-	Anae109_1160	-	molybdopterin converting factor, subunit 1
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.