IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1023	 69.29	-1	1175692..1176186	-	164	153003902	-	Anae109_1034	-	flavin reductase domain-containing protein
1024	 72.02	0	1176345..1176998	+	217	153003903	-	Anae109_1035	-	hypothetical protein
1025	 73.92	0	1177467..1177838	+	123	153003904	-	Anae109_1036	-	dinitrogenase iron-molybdenum cofactor biosynthesis protein
1026	 67.58	-1	1177961..1178287	-	108	153003905	-	Anae109_1037	-	zinc finger, UBP-type
1027	 71.86	0	1178605..1179816	-	403	153003906	-	Anae109_1038	-	hypothetical protein
1028	 69.81	0	1179835..1180407	-	190	153003907	-	Anae109_1039	-	TetR family transcriptional regulator
1029	 67.67	-1	1181034..1183028	+	664	153003908	-	Anae109_1040	-	PAS/PAC sensor hybrid histidine kinase
1030	 69.83	0	1183149..1184507	-	452	153003909	-	Anae109_1041	-	TrkA domain-containing protein
1031	 70.04	0	1184512..1186113	-	533	153003910	-	Anae109_1042	-	cation transporter
1032	 71.63	0	1186389..1187093	-	234	153003911	-	Anae109_1043	-	ABC transporter related
1033	 71.57	0	1187095..1188297	-	400	153003912	-	Anae109_1044	-	hypothetical protein
1034	 75.96	0	1188294..1189487	-	397	153003913	-	Anae109_1045	-	RND family efflux transporter MFP subunit
1035	 72.77	0	1189484..1190089	-	201	153003914	-	Anae109_1046	-	TetR family transcriptional regulator
1036	 72.40	0	1190290..1190760	+	156	153003915	-	Anae109_1047	-	hypothetical protein
1037	 72.33	0	1190791..1191249	+	152	153003916	-	Anae109_1048	-	hypothetical protein
1038	 66.87	-1	1191252..1191737	+	161	153003917	-	Anae109_1049	-	hypothetical protein
1039	 69.26	-1	1192078..1193040	+	320	153003918	-	Anae109_1050	-	alcohol dehydrogenase
1040	 75.02	0	1193063..1194367	-	434	153003919	-	Anae109_1051	-	NADH dehydrogenase
1041	 70.64	0	1194723..1195049	-	108	153003920	-	Anae109_1052	-	hypothetical protein
1042	 69.42	-1	1195143..1195433	-	96	153003921	-	Anae109_1053	-	hypothetical protein
1043	 72.16	0	1195430..1196176	-	248	153003922	-	Anae109_1054	-	oxidoreductase FAD/NAD(P)-binding subunit
1044	 66.50	-1	1196180..1196788	-	202	153003923	-	Anae109_1055	-	oxidoreductase molybdopterin binding
1045	 67.40	-1	1197408..1198088	-	226	153003924	-	Anae109_1057	-	glyoxalase/bleomycin resistance protein/dioxygenase
1046	 69.05	-1	1198150..1199574	-	474	153003925	-	Anae109_1058	-	epocide hydrolase domain-containing protein
1047	 69.86	0	1199856..1200920	-	354	153003926	-	Anae109_1059	-	alpha/beta hydrolase fold
1048	 67.42	-1	1201037..1201303	+	88	153003927	-	Anae109_1060	-	hypothetical protein
1049	 67.77	-1	1201535..1203343	+	602	153003928	-	Anae109_1061	-	sigma-54 dependent trancsriptional regulator
1050	 69.21	-1	1203392..1204297	-	301	153003929	-	Anae109_1062	-	hypothetical protein
1051	 71.37	0	1204294..1204548	-	84	153003930	-	Anae109_1063	-	hypothetical protein
1052	 70.19	0	1204562..1205128	-	188	153003931	-	Anae109_1064	-	activator of Hsp90 ATPase 1 family protein
1053	 66.67	-1	1205125..1205499	-	124	153003932	-	Anae109_1065	-	regulatory protein ArsR
1054	 67.83	-1	1205826..1208564	-	912	153003933	-	Anae109_1066	-	hypothetical protein
1055	 59.26	-2	1208970..1209320	+	116	153003934	-	Anae109_1067	-	hypothetical protein
1056	 71.47	0	1209714..1210067	+	117	153003935	-	Anae109_1068	-	DNA binding domain-containing protein
1057	 66.97	-1	1210114..1210770	-	218	153003936	-	Anae109_1069	-	hypothetical protein
1058	 71.89	0	1210794..1211693	-	299	153003937	-	Anae109_1070	-	hypothetical protein
1059	 69.26	-1	1211690..1212268	-	192	153003938	-	Anae109_1071	-	hypothetical protein
1060	 74.20	0	1212426..1213991	+	521	153003939	-	Anae109_1072	-	hypothetical protein
1061	 74.54	0	1213988..1215295	+	435	153003940	-	Anae109_1073	-	hypothetical protein
1062	 74.90	0	1215292..1219455	+	1387	153003941	-	Anae109_1074	-	hypothetical protein
1063	 72.56	0	1219452..1220792	+	446	153003942	-	Anae109_1075	-	hypothetical protein
1064	 71.16	0	1221060..1222238	+	392	153003943	-	Anae109_1076	-	transposase mutator type
1065	 63.42	-2	1222259..1222597	+	112	153003944	-	Anae109_1077	-	hypothetical protein
1066	 68.26	-1	1222718..1223470	+	250	153003945	-	Anae109_1078	-	hypothetical protein
1067	 66.36	-1	1223691..1224020	+	109	153003946	-	Anae109_1079	-	hypothetical protein
1068	 72.39	0	1224274..1225722	+	482	153003947	-	Anae109_1080	-	phage integrase family protein
1069	 74.70	0	1226164..1226412	+	82	153003948	-	Anae109_1081	-	phage transcriptional regulator, AlpA
1070	 73.75	0	1226412..1227329	+	305	153003949	-	Anae109_1082	-	hypothetical protein
1071	 70.39	0	1227330..1228001	+	223	153003950	-	Anae109_1083	-	hypothetical protein
1072	 67.21	-1	1228325..1229239	-	304	153003951	-	Anae109_1084	-	restriction endonuclease
1073	 69.70	0	1229779..1230801	+	340	153003952	-	Anae109_1085	-	hypothetical protein
1074	 68.56	-1	1230839..1231684	+	281	153003953	-	Anae109_1086	-	hypothetical protein
1075	 69.43	-1	1231744..1232286	-	180	153003954	-	Anae109_1087	-	hypothetical protein
1076	 72.04	0	1232761..1233318	-	185	153003955	-	Anae109_1088	-	isochorismatase hydrolase
1077	 75.14	0	1233376..1235028	-	550	153003956	-	Anae109_1089	-	thiamine pyrophosphate protein central region
1078	 67.99	-1	1235124..1235426	-	100	153003957	-	Anae109_1090	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1079	 66.67	-1	1235608..1235796	-	62	153003958	-	Anae109_1091	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1080	 76.12	0	1235938..1236318	-	126	153003959	-	Anae109_1092	-	hypothetical protein
1081	 71.84	0	1236388..1237218	+	276	153003960	-	Anae109_1093	-	ribosomal RNA methyltransferase RrmJ/FtsJ
1082	 70.26	0	1237443..1238693	-	416	153003961	-	Anae109_1094	-	tyrosyl-tRNA synthetase
1083	 72.54	0	1238696..1239529	-	277	153003962	-	Anae109_1095	-	metallophosphoesterase
1084	 77.18	+1	1239526..1240143	-	205	153003963	-	Anae109_1096	-	5-formyltetrahydrofolate cyclo-ligase
1085	 76.43	0	1240533..1241444	+	303	153003964	-	Anae109_1097	-	protein kinase
1086	 78.42	+1	1241562..1242701	-	379	153003965	-	Anae109_1098	-	aminotransferase class V
1087	 69.68	0	1242751..1243878	-	375	153003966	-	Anae109_1099	-	phosphoesterase domain-containing protein
1088	 71.53	0	1243875..1244717	-	280	153003967	-	Anae109_1100	-	apurinic endonuclease Apn1
1089	 68.50	-1	1244927..1245691	-	254	153003968	-	Anae109_1101	-	filamentation induced by cAMP protein Fic
1090	 68.66	-1	1246109..1247062	-	317	153003969	-	Anae109_1102	-	branched-chain amino acid aminotransferase
1091	 74.93	0	1247101..1248528	-	475	153003970	-	Anae109_1103	-	patatin
1092	 75.50	0	1248564..1251608	-	1014	153003971	-	Anae109_1104	-	(glutamate--ammonia-ligase) adenylyltransferase
1093	 72.20	0	1251799..1253226	-	475	153003972	-	Anae109_1105	-	two component, sigma54 specific, Fis family transcriptional regulator
1094	 71.21	0	1253293..1255428	-	711	153003973	-	Anae109_1106	-	glycogen debranching enzyme GlgX
1095	 77.33	+1	1255634..1256749	+	371	153003974	-	Anae109_1107	-	glycosyl transferase group 1
1096	 68.78	-1	1257119..1258018	+	299	153003975	-	Anae109_1108	-	RNA polymerase sigma-70
1097	 73.33	0	1258097..1258861	-	254	153003976	-	Anae109_1109	-	short-chain dehydrogenase/reductase SDR
1098	 75.31	0	1258979..1260505	-	508	153003977	-	Anae109_1110	-	integral membrane sensor signal transduction histidine kinase
1099	 76.51	0	1260502..1261182	-	226	153003978	-	Anae109_1111	-	hypothetical protein
1100	 74.15	0	1261179..1262582	-	467	153003979	-	Anae109_1112	-	surface antigen
1101	 77.62	+1	1262645..1264507	-	620	153003980	-	Anae109_1113	-	protein kinase
1102	 76.65	0	1264748..1265989	+	413	153003981	-	Anae109_1114	-	hypothetical protein
1103	 69.54	0	1265990..1267588	+	532	153003982	-	Anae109_1115	-	hypothetical protein
1104	 76.56	0	1267673..1268299	+	208	153003983	-	Anae109_1116	-	hypothetical protein
1105	 71.47	0	1268419..1269981	+	520	153003984	-	Anae109_1117	-	lysyl-tRNA synthetase
1106	 73.51	0	1269983..1271968	+	661	153003985	-	Anae109_1118	-	hypothetical protein
1107	 72.89	0	1271968..1272642	+	224	153003986	-	Anae109_1119	-	ABC transporter related
1108	 68.41	-1	1272696..1275158	+	820	153003987	-	Anae109_1120	-	surface antigen (D15)
1109	 68.96	-1	1275182..1275748	+	188	153003988	-	Anae109_1121	-	outer membrane chaperone Skp (OmpH)
1110	 73.84	0	1275756..1276814	+	352	153003989	-	Anae109_1122	-	UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
1111	 70.02	0	1276811..1277287	+	158	153003990	-	Anae109_1123	-	beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
1112	 73.26	0	1277306..1278079	+	257	153003991	-	Anae109_1124	-	acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
1113	 74.75	0	1278246..1279061	+	271	153003992	-	Anae109_1125	-	hypothetical protein
1114	 77.43	+1	1279058..1279345	+	95	153003993	-	Anae109_1126	-	hypothetical protein
1115	 76.44	0	1279360..1279584	+	74	153003994	-	Anae109_1127	-	hypothetical protein
1116	 70.94	0	1279731..1280783	+	350	153003995	-	Anae109_1128	-	uroporphyrinogen decarboxylase
1117	 69.56	0	1280792..1282174	+	460	153003996	-	Anae109_1129	-	coproporphyrinogen III oxidase
1118	 75.00	0	1282302..1283261	+	319	153003997	-	Anae109_1130	-	ferrochelatase
1119	 76.84	0	1283356..1284210	+	284	153003998	-	Anae109_1131	-	HAD family hydrolase
1120	 77.89	+1	1284207..1285658	+	483	153003999	-	Anae109_1132	-	exodeoxyribonuclease VII, large subunit
1121	 71.43	0	1285701..1285973	+	90	153004000	-	Anae109_1133	-	exodeoxyribonuclease VII, small subunit
1122	 67.39	-1	1285980..1286396	+	138	153004001	-	Anae109_1134	-	response regulator receiver protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.