IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.55   STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
933	 81.35	+1	1083933..1084688	+	251	86157363	-	Adeh_0936	-	hypothetical protein
934	 78.94	0	1084981..1085754	+	257	86157364	-	Adeh_0937	-	glycerophosphoryl diester phosphodiesterase
935	 71.06	0	1085806..1086078	-	90	86157365	-	Adeh_0938	-	hypothetical protein
936	 73.85	0	1086292..1087641	+	449	86157366	-	Adeh_0939	-	cytochrome bd ubiquinol oxidase, subunit I
937	 75.91	0	1087638..1088654	+	338	86157367	-	Adeh_0940	-	cytochrome bd ubiquinol oxidase, subunit II
938	 76.32	0	1088673..1089842	-	389	86157368	-	Adeh_0941	-	pyridine nucleotide-disulphide oxidoreductase
939	 73.11	0	1089947..1091032	-	361	86157369	-	Adeh_0942	-	L-threonine aldolase
940	 76.77	0	1091101..1093257	-	718	86157370	-	Adeh_0943	-	hypothetical protein
941	 73.81	0	1093318..1093695	-	125	86157371	-	Adeh_0944	-	hypothetical protein
942	 78.33	0	1093769..1094008	-	79	86157372	-	Adeh_0945	-	hypothetical protein
943	 76.91	0	1094064..1095527	-	487	86157373	-	Adeh_0946	-	hypothetical protein
944	 80.37	+1	1095544..1095981	-	145	86157374	-	Adeh_0947	-	hypothetical protein
945	 77.56	0	1096039..1097433	-	464	86157375	-	Adeh_0948	-	MATE efflux family protein
946	 71.58	0	1097666..1099678	+	670	86157376	-	Adeh_0949	-	K+ potassium transporter
947	 74.70	0	1099697..1100941	+	414	86157377	-	Adeh_0950	-	hypothetical protein
948	 80.65	+1	1101012..1101569	+	185	86157378	-	Adeh_0951	-	crossover junction endodeoxyribonuclease RuvC
949	 75.76	0	1101566..1102159	+	197	86157379	-	Adeh_0952	-	Holliday junction DNA helicase RuvA
950	 74.73	0	1102169..1103197	+	342	86157380	ruvB	Adeh_0953	-	Holliday junction DNA helicase B
951	 70.85	0	1103212..1103952	-	246	86157381	-	Adeh_0954	-	rhomboid-like protein
952	 72.38	0	1104240..1105166	+	308	86157382	lpxC	Adeh_0955	-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
953	 82.07	+1	1105246..1106277	+	343	86157383	-	Adeh_0956	-	hypothetical protein
954	 70.37	0	1106278..1106790	-	170	86157384	-	Adeh_0957	-	cyclase/dehydrase
955	 78.81	0	1106897..1107382	+	161	86157385	-	Adeh_0958	-	hypothetical protein
956	 70.42	0	1107379..1107618	+	79	86157386	-	Adeh_0959	-	hypothetical protein
957	 80.98	+1	1107649..1108095	-	148	86157387	-	Adeh_0960	-	hypothetical protein
958	 77.04	0	1108092..1108544	-	150	86157388	-	Adeh_0961	-	hypothetical protein
959	 73.78	0	1108669..1109610	-	313	86157389	-	Adeh_0962	-	hypothetical protein
960	 74.75	0	1109614..1110504	-	296	86157390	-	Adeh_0963	-	DNA end-binding protein Ku
961	 78.39	0	1110802..1112046	+	414	86157391	-	Adeh_0964	-	PGAP1-like
962	 72.78	0	1112065..1113339	-	424	86157392	-	Adeh_0965	-	Acetyl-CoA hydrolase/transferase
963	 77.52	0	1113458..1114222	-	254	86157393	-	Adeh_0966	-	hypothetical protein
964	 70.77	0	1114262..1114627	-	121	86157394	-	Adeh_0967	-	response regulator receiver domain-containing protein
965	 77.94	0	1114826..1115428	+	200	86157395	-	Adeh_0968	-	putative transmembrane protein
966	 80.07	+1	1115347..1115928	-	193	86157396	-	Adeh_0969	-	methylated-DNA--protein-cysteine methyltransferase
967	 81.55	+1	1115925..1117469	-	514	86157397	-	Adeh_0970	-	transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II
968	 76.16	0	1117534..1118049	-	171	86157398	-	Adeh_0971	-	cupin domain-containing protein
969	 66.96	-1	1118236..1119615	-	459	86157399	-	Adeh_0972	-	cytochrome c family protein
970	 64.22	-2	1119669..1119995	-	108	86157400	-	Adeh_0973	-	hypothetical protein
971	 68.44	-1	1120143..1121609	-	488	86157401	-	Adeh_0974	-	hypothetical protein
972	 76.20	0	1121780..1123153	+	457	86157402	-	Adeh_0975	-	sigma-54 dependent trancsriptional regulator
973	 75.64	0	1123186..1124466	+	426	86157403	-	Adeh_0976	-	Bcr/CflA subfamily drug resistance transporter
974	 77.88	0	1124562..1125497	+	311	86157404	-	Adeh_0977	-	LysR family transcriptional regulator
975	 79.13	+1	1125664..1126626	+	320	86157405	-	Adeh_0978	-	hypothetical protein
976	 79.12	+1	1126681..1128648	+	655	86157406	-	Adeh_0979	-	amino acid permease-associated region
977	 78.07	0	1128688..1129380	-	230	86157407	-	Adeh_0980	-	putative signal peptide protein
978	 74.08	0	1129384..1130799	-	471	86157408	-	Adeh_0981	-	alkaline phosphatase
979	 75.26	0	1130826..1132268	-	480	86157409	-	Adeh_0982	-	alkaline phosphatase
980	 77.38	0	1132391..1133725	+	444	86157410	-	Adeh_0983	-	histidine kinase
981	 75.00	0	1133722..1134141	+	139	86157411	-	Adeh_0984	-	response regulator receiver domain-containing protein
982	 75.31	0	1134195..1135664	+	489	86157412	-	Adeh_0985	-	peptidase M48, Ste24p
983	 74.84	0	1135770..1136075	+	101	86157413	-	Adeh_0986	-	zinc finger, UBP-type
984	 78.19	0	1136282..1136689	+	135	86157414	-	Adeh_0987	-	hypothetical protein
985	 66.18	-1	1136826..1137029	-	67	86157415	-	Adeh_0988	-	cold-shock DNA-binding protein family protein
986	 77.06	0	1137295..1138218	+	307	86157416	-	Adeh_0989	-	metallophosphoesterase
987	 80.87	+1	1138215..1140917	+	900	86157417	-	Adeh_0990	-	phospholipase D/transphosphatidylase
988	 74.64	0	1140945..1143227	-	760	86157418	-	Adeh_0991	-	hypothetical protein
989	 75.61	0	1143318..1146257	-	979	86157419	-	Adeh_0992	-	putative Vgr-related protein
990	 76.74	0	1146470..1146886	-	138	86157420	-	Adeh_0993	-	hypothetical protein
991	 73.96	0	1147031..1149649	+	872	86157421	-	Adeh_0994	-	hypothetical protein
992	 76.46	0	1149870..1150349	-	159	86157422	-	Adeh_0995	-	CoA-binding protein
993	 77.81	0	1150564..1151505	+	313	86157423	-	Adeh_0996	-	hypothetical protein
994	 78.22	0	1151536..1152729	-	397	86157424	-	Adeh_0997	-	hypothetical protein
995	 77.90	0	1152793..1153887	-	364	86157425	-	Adeh_0998	-	tungstate/molybdate transport system ATP-binding protein
996	 74.52	0	1153872..1154546	-	224	86157426	-	Adeh_0999	-	molybdate ABC transporter, inner membrane subunit
997	 77.91	0	1154549..1155331	-	260	86157427	-	Adeh_1000	-	molybdenum ABC transporter, periplasmic molybdate-binding protein
998	 79.61	+1	1155461..1156333	+	290	86157428	-	Adeh_1001	-	DNA-binding excisionase/Xis
999	 69.31	-1	1156424..1157557	-	377	86157429	-	Adeh_1002	-	basic membrane lipoprotein
1000	 73.94	0	1157617..1158537	-	306	86157430	-	Adeh_1003	-	ABC transporter, inner membrane subunit
1001	 72.91	0	1158534..1159622	-	362	86157431	-	Adeh_1004	-	ABC transporter, inner membrane subunit
1002	 74.98	0	1159619..1161157	-	512	86157432	-	Adeh_1005	-	ABC transporter, ATPase subunit
1003	 71.60	0	1161168..1161734	-	188	86157433	-	Adeh_1006	-	xanthine-guanine phosphoribosyltransferase
1004	 69.62	-1	1161814..1162185	-	123	86157434	-	Adeh_1007	-	DGPFAETKE domain-containing protein
1005	 76.45	0	1162509..1163009	-	166	86157435	-	Adeh_1008	-	hypothetical protein
1006	 76.03	0	1163220..1164575	+	451	86157436	-	Adeh_1009	-	hypothetical protein
1007	 73.42	0	1164588..1165253	-	221	86157437	-	Adeh_1010	-	bifunctional deaminase-reductase-like
1008	 76.46	0	1165439..1167133	-	564	86157438	-	Adeh_1011	-	hypothetical protein
1009	 67.93	-1	1167292..1168164	+	290	86157439	-	Adeh_1012	-	hypothetical protein
1010	 78.73	0	1168192..1168929	-	245	86157440	-	Adeh_1013	-	hypothetical protein
1011	 76.97	0	1168984..1169886	+	300	86157441	-	Adeh_1014	-	NmrA-like
1012	 76.72	0	1169907..1171667	-	586	86157442	-	Adeh_1015	-	thiamine pyrophosphate enzyme
1013	 80.34	+1	1171848..1173917	-	689	86157443	-	Adeh_1016	-	glycosyl transferase, group 1
1014	 78.86	0	1173908..1174858	-	316	86157444	-	Adeh_1017	-	LmbE-like protein
1015	 78.84	0	1175261..1176484	+	407	86157445	-	Adeh_1018	-	outer membrane efflux protein
1016	 75.35	0	1176481..1177851	+	456	86157446	-	Adeh_1019	-	secretion protein HlyD
1017	 72.04	0	1177863..1180931	+	1022	86157447	-	Adeh_1020	-	heavy metal efflux pump CzcA
1018	 74.79	0	1180968..1182062	-	364	86157448	-	Adeh_1021	-	linoleoyl-CoA desaturase
1019	 77.44	0	1182170..1183069	-	299	86157449	-	Adeh_1022	-	tyrosine phosphatase
1020	 69.63	-1	1183066..1184211	-	381	86157450	-	Adeh_1023	-	arsenical-resistance protein
1021	 73.22	0	1184221..1184571	-	116	86157451	-	Adeh_1024	-	ArsR family transcriptional regulator
1022	 74.36	0	1184736..1185125	+	129	86157452	-	Adeh_1025	-	thioredoxin-related
1023	 76.82	0	1185135..1185833	+	232	86157453	-	Adeh_1026	-	cytochrome c biogenesis protein, transmembrane region
1024	 71.12	0	1185856..1186956	+	366	86157454	-	Adeh_1027	-	transporter
1025	 69.23	-1	1186995..1187228	+	77	86157455	-	Adeh_1028	-	redox-active disulfide protein 2
1026	 74.57	0	1187246..1187878	+	210	86157456	-	Adeh_1029	-	methyltransferase type 11
1027	 71.73	0	1188007..1188618	+	203	86157457	-	Adeh_1030	-	isochorismatase hydrolase
1028	 68.44	-1	1188627..1189076	+	149	86157458	-	Adeh_1031	-	MarR family transcriptional regulator
1029	 72.02	0	1189282..1190196	+	304	86157459	-	Adeh_1032	-	hypothetical protein
1030	 78.22	0	1190196..1190792	+	198	86157460	-	Adeh_1033	-	rhomboid-like protein
1031	 76.71	0	1190728..1191633	-	301	86157461	-	Adeh_1034	-	LysR family transcriptional regulator
1032	 69.37	-1	1191764..1192207	+	147	86157462	-	Adeh_1035	-	hypothetical protein
74.55	MEAN

4.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.