IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.55   STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
864	 70.26	0	1006387..1006971	+	194	86157294	-	Adeh_0867	-	hypothetical protein
865	 79.44	+1	1006971..1007753	+	260	86157295	-	Adeh_0868	-	hypothetical protein
866	 77.26	0	1007764..1008405	+	213	86157296	-	Adeh_0869	-	hypothetical protein
867	 74.75	0	1008425..1009897	-	490	86157297	-	Adeh_0870	-	Sodium/hydrogen exchanger
868	 79.05	0	1009969..1011042	-	357	86157298	-	Adeh_0871	-	radical SAM family protein
869	 72.02	0	1011128..1011706	+	192	86157299	-	Adeh_0872	-	transcriptional regulator
870	 79.13	+1	1011782..1013233	+	483	86157300	-	Adeh_0873	-	response regulator receiver domain-containing protein
871	 77.75	0	1013675..1014856	+	393	86157301	-	Adeh_0874	-	hypothetical protein
872	 75.49	0	1014853..1015623	+	256	86157302	-	Adeh_0875	-	nucleotidyl transferase
873	 73.23	0	1015628..1016389	+	253	86157303	-	Adeh_0876	-	methyltransferase type 11
874	 73.22	0	1016386..1017270	+	294	86157304	-	Adeh_0877	-	hypothetical protein
875	 80.83	+1	1017261..1017980	-	239	86157305	-	Adeh_0878	-	hypothetical protein
876	 69.40	-1	1018181..1018693	+	170	86157306	-	Adeh_0879	-	OmpA/MotB family outer membrane protein
877	 78.49	0	1018781..1019203	+	140	86157307	-	Adeh_0880	-	hypothetical protein
878	 69.93	-1	1019232..1020242	+	336	86157308	-	Adeh_0881	-	SPFH domain-containing protein/band 7 family protein
879	 77.17	0	1020343..1020999	+	218	86157309	-	Adeh_0882	-	hypothetical protein
880	 82.07	+1	1020996..1021787	-	263	86157310	-	Adeh_0883	-	TPR repeat-containing protein
881	 79.83	+1	1021930..1024110	+	726	86157311	-	Adeh_0884	-	ATP dependent DNA ligase
882	 74.04	0	1024325..1024663	+	112	86157312	-	Adeh_0885	-	hypothetical protein
883	 77.41	0	1024668..1024937	-	89	86157313	-	Adeh_0886	-	hypothetical protein
884	 74.61	0	1025001..1026296	+	431	86157314	-	Adeh_0887	-	MscS mechanosensitive ion channel
885	 77.60	0	1026531..1028816	+	761	86157315	-	Adeh_0888	-	TPR repeat-containing protein
886	 81.62	+1	1029040..1029507	+	155	86157316	-	Adeh_0889	-	PE-PGRS family protein
887	 81.27	+1	1029518..1031161	+	547	86157317	-	Adeh_0890	-	abortive infection protein
888	 75.57	0	1031171..1031866	-	231	86157318	-	Adeh_0891	-	two component transcriptional regulator
889	 76.38	0	1031863..1034571	-	902	86157319	-	Adeh_0892	-	osmosensitive K+ channel signal transduction histidine kinase
890	 77.78	0	1034568..1035179	-	203	86157320	-	Adeh_0893	-	potassium-transporting ATPase, C subunit
891	 73.52	0	1035191..1037278	-	695	86157321	-	Adeh_0894	-	potassium-translocating P-type ATPase, B subunit
892	 74.50	0	1037284..1039020	-	578	86157322	-	Adeh_0895	-	potassium-transporting ATPase subunit A
893	 77.59	0	1039466..1040683	+	405	86157323	-	Adeh_0896	-	glycosyltransferase
894	 77.37	0	1040993..1042720	+	575	86157324	-	Adeh_0897	-	hypothetical protein
895	 74.36	0	1042781..1043209	-	142	86157325	-	Adeh_0898	-	hypothetical protein
896	 77.20	0	1043206..1044069	-	287	86157326	-	Adeh_0899	-	ABC transporter, inner membrane subunit
897	 79.28	+1	1044066..1045016	-	316	86157327	-	Adeh_0900	-	ABC transporter, ATPase subunit
898	 74.36	0	1045036..1045932	-	298	86157328	-	Adeh_0901	-	protoheme IX farnesyltransferase
899	 70.41	0	1046094..1046360	-	88	86157329	-	Adeh_0902	-	hypothetical protein
900	 72.97	0	1046477..1047349	+	290	86157330	-	Adeh_0903	-	ATPase
901	 78.95	0	1047359..1048042	+	227	86157331	-	Adeh_0904	-	deoxyribose-phosphate aldolase
902	 74.32	0	1048080..1049255	+	391	86157332	-	Adeh_0905	-	phosphopentomutase
903	 79.37	+1	1049252..1050172	+	306	86157333	-	Adeh_0906	-	hypothetical protein
904	 79.12	+1	1050136..1050384	-	82	86157334	-	Adeh_0907	-	hypothetical protein
905	 72.33	0	1050402..1052660	-	752	86157335	-	Adeh_0908	-	periplasmic nitrate reductase subunit NapA apoprotein
906	 80.41	+1	1052685..1053077	-	130	86157336	-	Adeh_0909	-	hypothetical protein
907	 69.59	-1	1053180..1054652	-	490	86157337	-	Adeh_0910	-	respiratory nitrite reductase (cytochrome; ammonia-forming) precursor
908	 71.93	0	1054690..1055145	-	151	86157338	-	Adeh_0911	-	respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor
909	 73.06	0	1055913..1060055	+	1380	86157339	-	Adeh_0912	-	fibronectin, type III/multicopper oxidase, type 2
910	 83.25	+1	1060158..1060724	+	188	86157340	-	Adeh_0913	-	putative dihydrolipoamide S-succinyltransferase
911	 72.81	0	1060828..1061283	+	151	86157341	-	Adeh_0914	-	bacterio-opsin linked product
912	 68.66	-1	1061293..1061694	-	133	86157342	-	Adeh_0915	-	hypothetical protein
913	 72.41	0	1061691..1062212	-	173	86157343	-	Adeh_0916	-	putative anti-sigma regulatory factor (serine/threonine protein kinase)
914	 76.60	0	1062199..1064091	-	630	86157344	-	Adeh_0917	-	serine phosphatase
915	 70.83	0	1064093..1064428	-	111	86157345	-	Adeh_0918	-	hypothetical protein
916	 72.47	0	1064428..1065582	-	384	86157346	-	Adeh_0919	-	hypothetical protein
917	 77.18	0	1065575..1066021	-	148	86157347	-	Adeh_0920	-	hypothetical protein
918	 74.19	0	1066018..1067187	-	389	86157348	-	Adeh_0921	-	hypothetical protein
919	 74.37	0	1067441..1068829	-	462	86157349	-	Adeh_0922	-	two component, sigma54 specific, Fis family transcriptional regulator
920	 77.33	0	1068826..1070691	-	621	86157350	-	Adeh_0923	-	multi-sensor signal transduction histidine kinase
921	 69.47	-1	1070829..1072148	-	439	86157351	-	Adeh_0924	-	O-acetylhomoserine/O-acetylserine sulfhydrylase
922	 72.87	0	1072383..1074203	+	606	86157352	-	Adeh_0925	-	AMP-dependent synthetase and ligase
923	 82.69	+1	1074207..1075292	-	361	86157353	-	Adeh_0926	-	hypothetical protein
924	 75.91	0	1075289..1075699	-	136	86157354	-	Adeh_0927	-	hypothetical protein
925	 76.86	0	1075736..1076863	-	375	86157355	-	Adeh_0928	-	adventurous gliding motility protein R
926	 76.06	0	1076860..1078041	-	393	86157356	-	Adeh_0929	-	chromosome partitioning-like ATPase
927	 76.79	0	1078203..1079012	+	269	86157357	-	Adeh_0930	-	cobyrinic acid a,c-diamide synthase
928	 75.08	0	1078978..1079880	-	300	86157358	-	Adeh_0931	-	LysR family transcriptional regulator
929	 70.65	0	1080019..1080570	+	183	86157359	-	Adeh_0932	-	YceI
930	 77.86	0	1080590..1081384	+	264	86157360	-	Adeh_0933	-	extradiol ring-cleavage dioxygenase III subunit B
931	 68.92	-1	1081412..1082122	-	236	86157361	-	Adeh_0934	-	PHA accumulation regulator DNA-binding-like
932	 82.13	+1	1082152..1083936	+	594	86157362	-	Adeh_0935	-	zinc finger/thioredoxin putative
933	 81.35	+1	1083933..1084688	+	251	86157363	-	Adeh_0936	-	hypothetical protein
934	 78.94	0	1084981..1085754	+	257	86157364	-	Adeh_0937	-	glycerophosphoryl diester phosphodiesterase
935	 71.06	0	1085806..1086078	-	90	86157365	-	Adeh_0938	-	hypothetical protein
936	 73.85	0	1086292..1087641	+	449	86157366	-	Adeh_0939	-	cytochrome bd ubiquinol oxidase, subunit I
937	 75.91	0	1087638..1088654	+	338	86157367	-	Adeh_0940	-	cytochrome bd ubiquinol oxidase, subunit II
938	 76.32	0	1088673..1089842	-	389	86157368	-	Adeh_0941	-	pyridine nucleotide-disulphide oxidoreductase
939	 73.11	0	1089947..1091032	-	361	86157369	-	Adeh_0942	-	L-threonine aldolase
940	 76.77	0	1091101..1093257	-	718	86157370	-	Adeh_0943	-	hypothetical protein
941	 73.81	0	1093318..1093695	-	125	86157371	-	Adeh_0944	-	hypothetical protein
942	 78.33	0	1093769..1094008	-	79	86157372	-	Adeh_0945	-	hypothetical protein
943	 76.91	0	1094064..1095527	-	487	86157373	-	Adeh_0946	-	hypothetical protein
944	 80.37	+1	1095544..1095981	-	145	86157374	-	Adeh_0947	-	hypothetical protein
945	 77.56	0	1096039..1097433	-	464	86157375	-	Adeh_0948	-	MATE efflux family protein
946	 71.58	0	1097666..1099678	+	670	86157376	-	Adeh_0949	-	K+ potassium transporter
947	 74.70	0	1099697..1100941	+	414	86157377	-	Adeh_0950	-	hypothetical protein
948	 80.65	+1	1101012..1101569	+	185	86157378	-	Adeh_0951	-	crossover junction endodeoxyribonuclease RuvC
949	 75.76	0	1101566..1102159	+	197	86157379	-	Adeh_0952	-	Holliday junction DNA helicase RuvA
950	 74.73	0	1102169..1103197	+	342	86157380	ruvB	Adeh_0953	-	Holliday junction DNA helicase B
951	 70.85	0	1103212..1103952	-	246	86157381	-	Adeh_0954	-	rhomboid-like protein
952	 72.38	0	1104240..1105166	+	308	86157382	lpxC	Adeh_0955	-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
953	 82.07	+1	1105246..1106277	+	343	86157383	-	Adeh_0956	-	hypothetical protein
954	 70.37	0	1106278..1106790	-	170	86157384	-	Adeh_0957	-	cyclase/dehydrase
955	 78.81	0	1106897..1107382	+	161	86157385	-	Adeh_0958	-	hypothetical protein
956	 70.42	0	1107379..1107618	+	79	86157386	-	Adeh_0959	-	hypothetical protein
957	 80.98	+1	1107649..1108095	-	148	86157387	-	Adeh_0960	-	hypothetical protein
958	 77.04	0	1108092..1108544	-	150	86157388	-	Adeh_0961	-	hypothetical protein
959	 73.78	0	1108669..1109610	-	313	86157389	-	Adeh_0962	-	hypothetical protein
960	 74.75	0	1109614..1110504	-	296	86157390	-	Adeh_0963	-	DNA end-binding protein Ku
961	 78.39	0	1110802..1112046	+	414	86157391	-	Adeh_0964	-	PGAP1-like
962	 72.78	0	1112065..1113339	-	424	86157392	-	Adeh_0965	-	Acetyl-CoA hydrolase/transferase
963	 77.52	0	1113458..1114222	-	254	86157393	-	Adeh_0966	-	hypothetical protein
74.55	MEAN

4.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.