IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
823	 78.09	0	960004..960870	-	288	86157253	-	Adeh_0826	-	formate dehydrogenase family accessory protein FdhD
824	 78.59	0	961080..963293	+	737	86157254	-	Adeh_0827	-	superfamily I DNA/RNA helicase
825	 69.50	-1	963424..963987	+	187	86157255	-	Adeh_0828	-	thiol peroxidase (atypical 2-Cys peroxiredoxin)
826	 70.55	0	964245..966485	+	746	86157256	-	Adeh_0829	-	peptidase M6, immune inhibitor A
827	 74.58	0	966523..968544	-	673	86157257	-	Adeh_0830	-	ABC transporter, duplicated ATPase subunits
828	 71.75	0	968606..970237	-	543	86157258	-	Adeh_0831	-	delta-1-pyrroline-5-carboxylate dehydrogenase
829	 79.97	+1	970361..970984	-	207	86157259	-	Adeh_0832	-	hypothetical protein
830	 76.09	0	971082..972482	-	466	86157260	-	Adeh_0833	-	two component, sigma54 specific, Fis family transcriptional regulator
831	 76.59	0	972479..973798	-	439	86157261	-	Adeh_0834	-	periplasmic sensor signal transduction histidine kinase
832	 74.19	0	973938..974867	+	309	86157262	-	Adeh_0835	-	ABC transporter, ATPase subunit
833	 69.95	-1	974864..975625	+	253	86157263	-	Adeh_0836	-	ABC transporter, inner membrane subunit
834	 73.55	0	975769..976581	+	270	86157264	-	Adeh_0837	-	hypothetical protein
835	 76.58	0	977323..978906	+	527	86157265	-	Adeh_0838	-	ATP-dependent DNA helicase RecQ
836	 77.66	0	978901..979464	-	187	86157266	-	Adeh_0839	-	hypothetical protein
837	 79.62	+1	979473..980159	-	228	86157267	-	Adeh_0840	-	hypothetical protein
838	 76.16	0	980283..980840	+	185	86157268	-	Adeh_0841	-	hypothetical protein
839	 71.94	0	981010..981483	+	157	86157269	-	Adeh_0842	-	BadM/Rrf2 family transcriptional regulator
840	 66.18	-1	981480..982919	+	479	86157270	-	Adeh_0843	-	cysteine desulfurase activator complex subunit SufB
841	 72.99	0	982923..983729	+	268	86157271	-	Adeh_0844	-	FeS assembly ATPase SufC
842	 78.39	0	983726..985039	+	437	86157272	-	Adeh_0845	-	FeS assembly protein SufD
843	 75.97	0	985036..986325	+	429	86157273	-	Adeh_0846	-	SufS subfamily cysteine desulfurase
844	 72.89	0	986360..986809	+	149	86157274	-	Adeh_0847	-	SUF system FeS assembly protein
845	 71.51	0	986854..987411	+	185	86157275	-	Adeh_0848	-	hypothetical protein
846	 73.73	0	987430..987882	-	150	86157276	-	Adeh_0849	-	FHA domain-containing protein
847	 77.55	0	987879..988319	-	146	86157277	-	Adeh_0850	-	universal stress protein UspA
848	 73.05	0	988549..989457	+	302	86157278	-	Adeh_0851	-	hypothetical protein
849	 81.44	+1	989515..991416	-	633	86157279	-	Adeh_0852	-	hypothetical protein
850	 80.99	+1	991565..992290	+	241	86157280	-	Adeh_0853	-	TonB-like
851	 75.18	0	992318..993550	-	410	86157281	-	Adeh_0854	-	hypothetical protein
852	 79.80	+1	993632..994537	-	301	86157282	-	Adeh_0855	-	peptidase S1 and S6, chymotrypsin/Hap
853	 81.15	+1	994534..995472	-	312	86157283	-	Adeh_0856	-	PDZ/DHR/GLGF
854	 82.23	+1	995620..996255	+	211	86157284	-	Adeh_0857	-	two component LuxR family transcriptional regulator
855	 78.68	0	996362..996877	+	171	86157285	-	Adeh_0858	-	FMN-binding pyridoxamine 5'-phosphate oxidase-related protein protein
856	 71.43	0	997304..998416	+	370	86157286	-	Adeh_0859	-	HNH nuclease
857	 78.63	0	998429..998821	-	130	86157287	-	Adeh_0860	-	translation initiation factor 1 (eIF-1/SUI1)
858	 83.00	+1	998818..1000029	-	403	86157288	-	Adeh_0861	-	TfuA-like protein
859	 81.32	+1	1000026..1001165	-	379	86157289	-	Adeh_0862	-	hypothetical protein
860	 73.89	0	1001236..1002633	+	465	86157290	-	Adeh_0863	-	peptidase M20
861	 69.64	-1	1002763..1005288	+	841	86157291	-	Adeh_0864	-	glycogen/starch/alpha-glucan phosphorylase
862	 77.93	0	1005191..1005634	-	147	86157292	-	Adeh_0865	-	methylated-DNA-(protein)-cysteine S-methyltransferase
863	 75.97	0	1005703..1006293	+	196	86157293	-	Adeh_0866	-	hypothetical protein
864	 70.26	0	1006387..1006971	+	194	86157294	-	Adeh_0867	-	hypothetical protein
865	 79.44	+1	1006971..1007753	+	260	86157295	-	Adeh_0868	-	hypothetical protein
866	 77.26	0	1007764..1008405	+	213	86157296	-	Adeh_0869	-	hypothetical protein
867	 74.75	0	1008425..1009897	-	490	86157297	-	Adeh_0870	-	Sodium/hydrogen exchanger
868	 79.05	0	1009969..1011042	-	357	86157298	-	Adeh_0871	-	radical SAM family protein
869	 72.02	0	1011128..1011706	+	192	86157299	-	Adeh_0872	-	transcriptional regulator
870	 79.13	+1	1011782..1013233	+	483	86157300	-	Adeh_0873	-	response regulator receiver domain-containing protein
871	 77.75	0	1013675..1014856	+	393	86157301	-	Adeh_0874	-	hypothetical protein
872	 75.49	0	1014853..1015623	+	256	86157302	-	Adeh_0875	-	nucleotidyl transferase
873	 73.23	0	1015628..1016389	+	253	86157303	-	Adeh_0876	-	methyltransferase type 11
874	 73.22	0	1016386..1017270	+	294	86157304	-	Adeh_0877	-	hypothetical protein
875	 80.83	+1	1017261..1017980	-	239	86157305	-	Adeh_0878	-	hypothetical protein
876	 69.40	-1	1018181..1018693	+	170	86157306	-	Adeh_0879	-	OmpA/MotB family outer membrane protein
877	 78.49	0	1018781..1019203	+	140	86157307	-	Adeh_0880	-	hypothetical protein
878	 69.93	-1	1019232..1020242	+	336	86157308	-	Adeh_0881	-	SPFH domain-containing protein/band 7 family protein
879	 77.17	0	1020343..1020999	+	218	86157309	-	Adeh_0882	-	hypothetical protein
880	 82.07	+1	1020996..1021787	-	263	86157310	-	Adeh_0883	-	TPR repeat-containing protein
881	 79.83	+1	1021930..1024110	+	726	86157311	-	Adeh_0884	-	ATP dependent DNA ligase
882	 74.04	0	1024325..1024663	+	112	86157312	-	Adeh_0885	-	hypothetical protein
883	 77.41	0	1024668..1024937	-	89	86157313	-	Adeh_0886	-	hypothetical protein
884	 74.61	0	1025001..1026296	+	431	86157314	-	Adeh_0887	-	MscS mechanosensitive ion channel
885	 77.60	0	1026531..1028816	+	761	86157315	-	Adeh_0888	-	TPR repeat-containing protein
886	 81.62	+1	1029040..1029507	+	155	86157316	-	Adeh_0889	-	PE-PGRS family protein
887	 81.27	+1	1029518..1031161	+	547	86157317	-	Adeh_0890	-	abortive infection protein
888	 75.57	0	1031171..1031866	-	231	86157318	-	Adeh_0891	-	two component transcriptional regulator
889	 76.38	0	1031863..1034571	-	902	86157319	-	Adeh_0892	-	osmosensitive K+ channel signal transduction histidine kinase
890	 77.78	0	1034568..1035179	-	203	86157320	-	Adeh_0893	-	potassium-transporting ATPase, C subunit
891	 73.52	0	1035191..1037278	-	695	86157321	-	Adeh_0894	-	potassium-translocating P-type ATPase, B subunit
892	 74.50	0	1037284..1039020	-	578	86157322	-	Adeh_0895	-	potassium-transporting ATPase subunit A
893	 77.59	0	1039466..1040683	+	405	86157323	-	Adeh_0896	-	glycosyltransferase
894	 77.37	0	1040993..1042720	+	575	86157324	-	Adeh_0897	-	hypothetical protein
895	 74.36	0	1042781..1043209	-	142	86157325	-	Adeh_0898	-	hypothetical protein
896	 77.20	0	1043206..1044069	-	287	86157326	-	Adeh_0899	-	ABC transporter, inner membrane subunit
897	 79.28	+1	1044066..1045016	-	316	86157327	-	Adeh_0900	-	ABC transporter, ATPase subunit
898	 74.36	0	1045036..1045932	-	298	86157328	-	Adeh_0901	-	protoheme IX farnesyltransferase
899	 70.41	0	1046094..1046360	-	88	86157329	-	Adeh_0902	-	hypothetical protein
900	 72.97	0	1046477..1047349	+	290	86157330	-	Adeh_0903	-	ATPase
901	 78.95	0	1047359..1048042	+	227	86157331	-	Adeh_0904	-	deoxyribose-phosphate aldolase
902	 74.32	0	1048080..1049255	+	391	86157332	-	Adeh_0905	-	phosphopentomutase
903	 79.37	+1	1049252..1050172	+	306	86157333	-	Adeh_0906	-	hypothetical protein
904	 79.12	+1	1050136..1050384	-	82	86157334	-	Adeh_0907	-	hypothetical protein
905	 72.33	0	1050402..1052660	-	752	86157335	-	Adeh_0908	-	periplasmic nitrate reductase subunit NapA apoprotein
906	 80.41	+1	1052685..1053077	-	130	86157336	-	Adeh_0909	-	hypothetical protein
907	 69.59	-1	1053180..1054652	-	490	86157337	-	Adeh_0910	-	respiratory nitrite reductase (cytochrome; ammonia-forming) precursor
908	 71.93	0	1054690..1055145	-	151	86157338	-	Adeh_0911	-	respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor
909	 73.06	0	1055913..1060055	+	1380	86157339	-	Adeh_0912	-	fibronectin, type III/multicopper oxidase, type 2
910	 83.25	+1	1060158..1060724	+	188	86157340	-	Adeh_0913	-	putative dihydrolipoamide S-succinyltransferase
911	 72.81	0	1060828..1061283	+	151	86157341	-	Adeh_0914	-	bacterio-opsin linked product
912	 68.66	-1	1061293..1061694	-	133	86157342	-	Adeh_0915	-	hypothetical protein
913	 72.41	0	1061691..1062212	-	173	86157343	-	Adeh_0916	-	putative anti-sigma regulatory factor (serine/threonine protein kinase)
914	 76.60	0	1062199..1064091	-	630	86157344	-	Adeh_0917	-	serine phosphatase
915	 70.83	0	1064093..1064428	-	111	86157345	-	Adeh_0918	-	hypothetical protein
916	 72.47	0	1064428..1065582	-	384	86157346	-	Adeh_0919	-	hypothetical protein
917	 77.18	0	1065575..1066021	-	148	86157347	-	Adeh_0920	-	hypothetical protein
918	 74.19	0	1066018..1067187	-	389	86157348	-	Adeh_0921	-	hypothetical protein
919	 74.37	0	1067441..1068829	-	462	86157349	-	Adeh_0922	-	two component, sigma54 specific, Fis family transcriptional regulator
920	 77.33	0	1068826..1070691	-	621	86157350	-	Adeh_0923	-	multi-sensor signal transduction histidine kinase
921	 69.47	-1	1070829..1072148	-	439	86157351	-	Adeh_0924	-	O-acetylhomoserine/O-acetylserine sulfhydrylase
922	 72.87	0	1072383..1074203	+	606	86157352	-	Adeh_0925	-	AMP-dependent synthetase and ligase
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.