IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.55   STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
766	 74.05	0	886471..887256	+	261	86157196	-	Adeh_0769	-	diguanylate phosphodiesterase
767	 73.40	0	887266..889077	-	603	86157197	-	Adeh_0770	-	cyclic nucleotide-binding domain-containing protein
768	 80.78	+1	889168..889677	-	169	86157198	-	Adeh_0771	-	adenylylsulfate kinase
769	 79.96	+1	889674..890786	-	370	86157199	-	Adeh_0772	-	hypothetical protein
770	 73.18	0	890918..891715	+	265	86157200	-	Adeh_0773	-	prolipoprotein diacylglyceryl transferase
771	 81.90	+1	891731..893581	+	616	86157201	-	Adeh_0774	-	heat shock protein DnaJ-like
772	 79.44	+1	893769..894308	+	179	86157202	-	Adeh_0775	-	hypothetical protein
773	 72.36	0	894399..894767	+	122	86157203	-	Adeh_0776	-	response regulator receiver domain-containing protein
774	 79.88	+1	894824..895837	+	337	86157204	-	Adeh_0777	-	NAD-dependent epimerase/dehydratase
775	 76.88	0	895884..897146	-	420	86157205	-	Adeh_0778	-	hypothetical protein
776	 78.19	0	897425..898552	+	375	86157206	-	Adeh_0779	-	hypothetical protein
777	 81.38	+1	898640..899788	-	382	86157207	-	Adeh_0780	-	methyltransferase
778	 73.30	0	899847..902666	+	939	86157208	kgd	Adeh_0781	-	alpha-ketoglutarate decarboxylase
779	 74.29	0	902685..903956	+	423	86157209	-	Adeh_0782	-	2-oxoglutarate dehydrogenase E2 component
780	 77.07	0	903972..904721	-	249	86157210	-	Adeh_0783	-	hypothetical protein
781	 78.86	0	904718..906694	-	658	86157211	-	Adeh_0784	-	ATP dependent DNA ligase
782	 73.26	0	906794..907369	-	191	86157212	-	Adeh_0785	-	hypothetical protein
783	 75.21	0	907450..908058	-	202	86157213	-	Adeh_0786	-	hypothetical protein
784	 80.53	+1	908135..910717	-	860	86157214	-	Adeh_0787	-	ATP-dependent helicase HrpB
785	 71.99	0	910927..911358	+	143	86157215	-	Adeh_0788	-	heat shock protein Hsp20
786	 70.92	0	911486..913768	-	760	86157216	-	Adeh_0789	-	AAA ATPase
787	 64.53	-2	913771..914097	-	108	86157217	-	Adeh_0790	-	ATP-dependent Clp protease adaptor protein ClpS
788	 77.32	0	914227..916188	+	653	86157218	-	Adeh_0791	-	peptidase S9, prolyl oligopeptidase active site region
789	 76.50	0	916211..916912	-	233	86157219	aat	Adeh_0792	-	leucyl/phenylalanyl-tRNA--protein transferase
790	 77.99	0	916954..917748	-	264	86157220	-	Adeh_0793	-	hypothetical protein
791	 72.84	0	917795..918652	-	285	86157221	-	Adeh_0794	-	sigma-24 (FecI-like)
792	 67.59	-1	918944..919594	+	216	86157222	-	Adeh_0795	-	hypothetical protein
793	 75.39	0	919582..922539	+	985	86157223	-	Adeh_0796	-	4Fe-4S ferredoxin, iron-sulfur binding protein
794	 67.22	-1	922536..923972	+	478	86157224	-	Adeh_0797	-	polysulphide reductase, NrfD
795	 74.05	0	923969..924496	+	175	86157225	-	Adeh_0798	-	transmembrane prediction
796	 73.30	0	924498..925070	+	190	86157226	-	Adeh_0799	-	hypothetical protein
797	 70.38	0	925067..926251	+	394	86157227	-	Adeh_0800	-	hypothetical protein
798	 73.97	0	926248..926685	+	145	86157228	-	Adeh_0801	-	hypothetical protein
799	 73.97	0	926682..927557	+	291	86157229	-	Adeh_0802	-	SCO1/SenC family protein
800	 68.76	-1	927554..928606	+	350	86157230	-	Adeh_0803	-	cytochrome c oxidase, subunit II
801	 65.53	-1	928584..930248	+	554	86157231	-	Adeh_0804	-	cytochrome-c oxidase
802	 65.71	-1	930238..930867	+	209	86157232	-	Adeh_0805	-	cytochrome c oxidase, subunit III
803	 71.97	0	930881..931276	+	131	86157233	-	Adeh_0806	-	Caa(3)-type oxidase, subunit IV
804	 75.97	0	931412..931798	+	128	86157234	-	Adeh_0807	-	hypothetical protein
805	 73.96	0	931795..933576	+	593	86157235	-	Adeh_0808	-	pyruvate decarboxylase
806	 79.23	+1	933578..934675	+	365	86157236	-	Adeh_0809	-	mandelate racemase/muconate lactonizing protein
807	 77.32	0	934689..937841	+	1050	86157237	-	Adeh_0810	-	hypothetical protein
808	 78.09	0	937808..938341	-	177	86157238	-	Adeh_0811	-	Appr-1-p processing
809	 75.66	0	938631..940031	+	466	86157239	-	Adeh_0812	-	two component, sigma54 specific, Fis family transcriptional regulator
810	 71.45	0	940152..941009	-	285	86157240	-	Adeh_0813	-	cytochrome c assembly protein
811	 75.57	0	941020..942693	-	557	86157241	-	Adeh_0814	-	LigA
812	 73.87	0	942981..943646	+	221	86157242	-	Adeh_0815	-	hypothetical protein
813	 77.58	0	943653..944678	-	341	86157243	ligC	Adeh_0816	-	ATP-dependent DNA ligase
814	 71.53	0	945049..949656	+	1535	86157244	-	Adeh_0817	-	glutamate synthase (NADH) large subunit
815	 72.24	0	949659..951146	+	495	86157245	-	Adeh_0818	-	glutamate synthase (NADH) small subunit
816	 75.00	0	951214..951873	-	219	86157246	-	Adeh_0819	-	hypothetical protein
817	 72.69	0	952084..953445	-	453	86157247	-	Adeh_0820	-	major facilitator transporter
818	 76.53	0	953495..954508	-	337	86157248	-	Adeh_0821	-	molybdenum cofactor biosynthesis protein A
819	 78.75	0	954492..955691	-	399	86157249	-	Adeh_0822	-	polysulphide reductase, NrfD
820	 74.60	0	955691..956623	-	310	86157250	-	Adeh_0823	-	formate dehydrogenase beta subunit
821	 71.33	0	956644..959238	-	864	86157251	-	Adeh_0824	-	formate dehydrogenase
822	 72.11	0	959347..959934	-	195	86157252	-	Adeh_0825	-	molybdopterin oxidoreductase Fe4S4 region
823	 78.09	0	960004..960870	-	288	86157253	-	Adeh_0826	-	formate dehydrogenase family accessory protein FdhD
824	 78.59	0	961080..963293	+	737	86157254	-	Adeh_0827	-	superfamily I DNA/RNA helicase
825	 69.50	-1	963424..963987	+	187	86157255	-	Adeh_0828	-	thiol peroxidase (atypical 2-Cys peroxiredoxin)
826	 70.55	0	964245..966485	+	746	86157256	-	Adeh_0829	-	peptidase M6, immune inhibitor A
827	 74.58	0	966523..968544	-	673	86157257	-	Adeh_0830	-	ABC transporter, duplicated ATPase subunits
828	 71.75	0	968606..970237	-	543	86157258	-	Adeh_0831	-	delta-1-pyrroline-5-carboxylate dehydrogenase
829	 79.97	+1	970361..970984	-	207	86157259	-	Adeh_0832	-	hypothetical protein
830	 76.09	0	971082..972482	-	466	86157260	-	Adeh_0833	-	two component, sigma54 specific, Fis family transcriptional regulator
831	 76.59	0	972479..973798	-	439	86157261	-	Adeh_0834	-	periplasmic sensor signal transduction histidine kinase
832	 74.19	0	973938..974867	+	309	86157262	-	Adeh_0835	-	ABC transporter, ATPase subunit
833	 69.95	-1	974864..975625	+	253	86157263	-	Adeh_0836	-	ABC transporter, inner membrane subunit
834	 73.55	0	975769..976581	+	270	86157264	-	Adeh_0837	-	hypothetical protein
835	 76.58	0	977323..978906	+	527	86157265	-	Adeh_0838	-	ATP-dependent DNA helicase RecQ
836	 77.66	0	978901..979464	-	187	86157266	-	Adeh_0839	-	hypothetical protein
837	 79.62	+1	979473..980159	-	228	86157267	-	Adeh_0840	-	hypothetical protein
838	 76.16	0	980283..980840	+	185	86157268	-	Adeh_0841	-	hypothetical protein
839	 71.94	0	981010..981483	+	157	86157269	-	Adeh_0842	-	BadM/Rrf2 family transcriptional regulator
840	 66.18	-1	981480..982919	+	479	86157270	-	Adeh_0843	-	cysteine desulfurase activator complex subunit SufB
841	 72.99	0	982923..983729	+	268	86157271	-	Adeh_0844	-	FeS assembly ATPase SufC
842	 78.39	0	983726..985039	+	437	86157272	-	Adeh_0845	-	FeS assembly protein SufD
843	 75.97	0	985036..986325	+	429	86157273	-	Adeh_0846	-	SufS subfamily cysteine desulfurase
844	 72.89	0	986360..986809	+	149	86157274	-	Adeh_0847	-	SUF system FeS assembly protein
845	 71.51	0	986854..987411	+	185	86157275	-	Adeh_0848	-	hypothetical protein
846	 73.73	0	987430..987882	-	150	86157276	-	Adeh_0849	-	FHA domain-containing protein
847	 77.55	0	987879..988319	-	146	86157277	-	Adeh_0850	-	universal stress protein UspA
848	 73.05	0	988549..989457	+	302	86157278	-	Adeh_0851	-	hypothetical protein
849	 81.44	+1	989515..991416	-	633	86157279	-	Adeh_0852	-	hypothetical protein
850	 80.99	+1	991565..992290	+	241	86157280	-	Adeh_0853	-	TonB-like
851	 75.18	0	992318..993550	-	410	86157281	-	Adeh_0854	-	hypothetical protein
852	 79.80	+1	993632..994537	-	301	86157282	-	Adeh_0855	-	peptidase S1 and S6, chymotrypsin/Hap
853	 81.15	+1	994534..995472	-	312	86157283	-	Adeh_0856	-	PDZ/DHR/GLGF
854	 82.23	+1	995620..996255	+	211	86157284	-	Adeh_0857	-	two component LuxR family transcriptional regulator
855	 78.68	0	996362..996877	+	171	86157285	-	Adeh_0858	-	FMN-binding pyridoxamine 5'-phosphate oxidase-related protein protein
856	 71.43	0	997304..998416	+	370	86157286	-	Adeh_0859	-	HNH nuclease
857	 78.63	0	998429..998821	-	130	86157287	-	Adeh_0860	-	translation initiation factor 1 (eIF-1/SUI1)
858	 83.00	+1	998818..1000029	-	403	86157288	-	Adeh_0861	-	TfuA-like protein
859	 81.32	+1	1000026..1001165	-	379	86157289	-	Adeh_0862	-	hypothetical protein
860	 73.89	0	1001236..1002633	+	465	86157290	-	Adeh_0863	-	peptidase M20
861	 69.64	-1	1002763..1005288	+	841	86157291	-	Adeh_0864	-	glycogen/starch/alpha-glucan phosphorylase
862	 77.93	0	1005191..1005634	-	147	86157292	-	Adeh_0865	-	methylated-DNA-(protein)-cysteine S-methyltransferase
863	 75.97	0	1005703..1006293	+	196	86157293	-	Adeh_0866	-	hypothetical protein
864	 70.26	0	1006387..1006971	+	194	86157294	-	Adeh_0867	-	hypothetical protein
865	 79.44	+1	1006971..1007753	+	260	86157295	-	Adeh_0868	-	hypothetical protein
74.55	MEAN

4.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.