IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.55   STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
695	 72.40	0	813731..815020	+	429	86157125	-	Adeh_0697	-	ribonuclease BN, putative
696	 66.10	-1	815166..815516	+	116	86157126	-	Adeh_0698	-	histone-like DNA-binding protein
697	 79.40	+1	815586..817619	-	677	86157127	-	Adeh_0699	-	type III secretion FHIPEP
698	 82.66	+1	817616..818647	-	343	86157128	-	Adeh_0700	-	type III secretion exporter
699	 82.75	+1	818644..819420	-	258	86157129	-	Adeh_0701	-	type III secretion system inner membrane R protein
700	 77.53	0	819417..819683	-	88	86157130	-	Adeh_0702	-	type III secretion protein HrpO
701	 75.81	0	819686..820363	-	225	86157131	-	Adeh_0703	-	type III secretion system protein
702	 86.67	+2	820360..820719	-	119	86157132	-	Adeh_0704	-	hypothetical protein
703	 80.62	+1	820716..821690	-	324	86157133	-	Adeh_0705	-	surface presentation of antigens (SPOA) protein
704	 81.53	+1	822137..822856	-	239	86157134	-	Adeh_0706	-	secretory protein YscJ/FliF
705	 80.95	+1	822867..823223	-	118	86157135	-	Adeh_0707	-	hypothetical protein
706	 79.77	+1	823327..823845	+	172	86157136	-	Adeh_0708	-	hypothetical protein
707	 73.42	0	823811..825127	+	438	86157137	-	Adeh_0709	-	hypothetical protein
708	 75.25	0	825147..826265	-	372	86157138	-	Adeh_0710	-	hypothetical protein
709	 78.00	0	826315..826905	-	196	86157139	-	Adeh_0711	-	LuxR family transcriptional regulator
710	 78.92	0	827119..828513	+	464	86157140	-	Adeh_0712	-	histidinol dehydrogenase
711	 73.84	0	828510..829136	+	208	86157141	-	Adeh_0713	-	imidazoleglycerol-phosphate dehydratase
712	 76.59	0	829133..829747	+	204	86157142	-	Adeh_0714	-	imidazole glycerol phosphate synthase subunit hisH
713	 75.31	0	829757..830473	+	238	86157143	-	Adeh_0715	-	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
714	 74.38	0	830492..831256	+	254	86157144	-	Adeh_0716	-	imidazole glycerol phosphate synthase subunit hisF
715	 60.64	-2	831967..832248	+	93	86157145	-	Adeh_0718	-	SSU ribosomal protein S21P
716	 69.78	-1	832260..832709	+	149	86157146	-	Adeh_0719	-	hypothetical protein
717	 75.57	0	832743..834686	+	647	86157147	-	Adeh_0720	-	DNA primase
718	 68.49	-1	834683..837100	+	805	86157148	-	Adeh_0721	-	sigma 70 (RpoD)
719	 71.36	0	837218..838006	+	262	86157149	-	Adeh_0722	-	hypothetical protein
720	 72.78	0	838264..838770	+	168	86157150	-	Adeh_0723	-	ribonuclease H
721	 65.27	-2	839100..839744	+	214	86157151	-	Adeh_0724	-	GPR1/FUN34/yaaH
722	 69.71	-1	839826..840383	-	185	86157152	-	Adeh_0725	-	peptide deformylase
723	 83.76	+2	840478..843204	-	908	86157153	-	Adeh_0726	-	hypothetical protein
724	 77.88	0	843327..845537	-	736	86157154	-	Adeh_0727	-	replication restart DNA helicase PriA
725	 80.06	+1	845610..846251	+	213	86157155	-	Adeh_0728	-	hypothetical protein
726	 75.86	0	846290..846931	-	213	86157156	-	Adeh_0729	-	hypothetical protein
727	 73.97	0	846966..848279	-	437	86157157	-	Adeh_0730	-	recombination factor protein RarA
728	 70.45	0	848325..849143	+	272	86157158	-	Adeh_0731	-	NAD(+) kinase
729	 78.64	0	849205..851025	+	606	86157159	-	Adeh_0732	-	DNA repair protein RecN
730	 71.45	0	851171..851965	+	264	86157160	-	Adeh_0733	-	serine/threonine phosphatase
731	 70.48	0	852159..853076	+	305	86157161	-	Adeh_0734	-	peptidase M23B
732	 80.12	+1	853139..853822	-	227	86157162	-	Adeh_0735	-	hypothetical protein
733	 68.43	-1	854032..856920	+	962	86157163	-	Adeh_0736	-	protein translocase subunit secA
734	 78.27	0	857268..858560	-	430	86157164	-	Adeh_0737	-	hypothetical protein
735	 77.31	0	858657..859586	+	309	86157165	-	Adeh_0738	-	HhH-GPD
736	 66.67	-1	859668..859916	+	82	86157166	-	Adeh_0739	-	AsnC family transcriptional regulator
737	 68.12	-1	859964..860377	+	137	86157167	-	Adeh_0740	-	thioesterase superfamily protein
738	 71.35	0	860557..861111	+	184	86157168	-	Adeh_0741	-	hypothetical protein
739	 74.20	0	861108..861956	+	282	86157169	-	Adeh_0742	-	RNA polymerase sigma factor SigJ
740	 78.28	0	862554..864215	+	553	86157170	-	Adeh_0743	-	hypothetical protein
741	 75.37	0	864260..864994	-	244	86157171	-	Adeh_0744	-	hypothetical protein
742	 76.96	0	865136..866155	-	339	86157172	-	Adeh_0745	-	zinc-binding alcohol dehydrogenase
743	 76.66	0	866274..867194	+	306	86157173	-	Adeh_0746	-	LysR family transcriptional regulator
744	 75.13	0	867198..868343	-	381	86157174	-	Adeh_0747	-	hypothetical protein
745	 76.84	0	868361..869068	-	235	86157175	-	Adeh_0748	-	FAD/NAD(P)-binding oxidoreductase
746	 80.86	+1	869097..870329	-	410	86157176	-	Adeh_0749	-	glycosyl transferase family protein
747	 77.81	0	870326..871240	-	304	86157177	-	Adeh_0750	-	Beta-lactamase-like
748	 70.52	0	871243..871761	-	172	86157178	-	Adeh_0751	-	adenine phosphoribosyltransferase
749	 79.57	+1	871796..872671	-	291	86157179	-	Adeh_0752	-	peptidoglycan-binding peptidase M23B
750	 74.77	0	872668..873432	-	254	86157180	-	Adeh_0753	-	exopolyphosphatase / 5'-nucleotidase / 3'-nucleotidase
751	 77.78	0	873517..874020	-	167	86157181	-	Adeh_0754	-	MarR family transcriptional regulator
752	 78.89	0	874174..875940	+	588	86157182	-	Adeh_0755	-	GAF sensor signal transduction histidine kinase
753	 77.71	0	875975..876454	+	159	86157183	-	Adeh_0756	-	PBP family phospholipid-binding protein
754	 77.07	0	876458..876928	-	156	86157184	-	Adeh_0757	-	YbaK/prolyl-tRNA synthetase associated region
755	 82.59	+1	877060..877599	+	179	86157185	-	Adeh_0758	-	hypothetical protein
756	 72.55	0	877596..878666	-	356	86157186	-	Adeh_0759	-	4Fe-4S ferredoxin, iron-sulfur binding protein
757	 75.17	0	878795..879700	-	301	86157187	-	Adeh_0760	-	hypothetical protein
758	 75.11	0	879818..880279	+	153	86157188	-	Adeh_0761	-	universal stress protein UspA
759	 74.37	0	880315..881301	+	328	86157189	-	Adeh_0762	-	dihydroorotate dehydrogenase 2
760	 83.94	+2	881350..882003	+	217	86157190	-	Adeh_0763	-	diacylglycerol kinase
761	 76.85	0	882058..882381	-	107	86157191	-	Adeh_0764	-	hypothetical protein
762	 68.10	-1	882672..883091	+	139	86157192	-	Adeh_0765	-	rubrerythrin
763	 71.56	0	883209..884576	+	455	86157193	-	Adeh_0766	-	hypothetical protein
764	 72.55	0	884596..885156	+	186	86157194	-	Adeh_0767	-	hypothetical protein
765	 74.52	0	885661..886284	-	207	86157195	-	Adeh_0768	-	exonuclease
766	 74.05	0	886471..887256	+	261	86157196	-	Adeh_0769	-	diguanylate phosphodiesterase
767	 73.40	0	887266..889077	-	603	86157197	-	Adeh_0770	-	cyclic nucleotide-binding domain-containing protein
768	 80.78	+1	889168..889677	-	169	86157198	-	Adeh_0771	-	adenylylsulfate kinase
769	 79.96	+1	889674..890786	-	370	86157199	-	Adeh_0772	-	hypothetical protein
770	 73.18	0	890918..891715	+	265	86157200	-	Adeh_0773	-	prolipoprotein diacylglyceryl transferase
771	 81.90	+1	891731..893581	+	616	86157201	-	Adeh_0774	-	heat shock protein DnaJ-like
772	 79.44	+1	893769..894308	+	179	86157202	-	Adeh_0775	-	hypothetical protein
773	 72.36	0	894399..894767	+	122	86157203	-	Adeh_0776	-	response regulator receiver domain-containing protein
774	 79.88	+1	894824..895837	+	337	86157204	-	Adeh_0777	-	NAD-dependent epimerase/dehydratase
775	 76.88	0	895884..897146	-	420	86157205	-	Adeh_0778	-	hypothetical protein
776	 78.19	0	897425..898552	+	375	86157206	-	Adeh_0779	-	hypothetical protein
777	 81.38	+1	898640..899788	-	382	86157207	-	Adeh_0780	-	methyltransferase
778	 73.30	0	899847..902666	+	939	86157208	kgd	Adeh_0781	-	alpha-ketoglutarate decarboxylase
779	 74.29	0	902685..903956	+	423	86157209	-	Adeh_0782	-	2-oxoglutarate dehydrogenase E2 component
780	 77.07	0	903972..904721	-	249	86157210	-	Adeh_0783	-	hypothetical protein
781	 78.86	0	904718..906694	-	658	86157211	-	Adeh_0784	-	ATP dependent DNA ligase
782	 73.26	0	906794..907369	-	191	86157212	-	Adeh_0785	-	hypothetical protein
783	 75.21	0	907450..908058	-	202	86157213	-	Adeh_0786	-	hypothetical protein
784	 80.53	+1	908135..910717	-	860	86157214	-	Adeh_0787	-	ATP-dependent helicase HrpB
785	 71.99	0	910927..911358	+	143	86157215	-	Adeh_0788	-	heat shock protein Hsp20
786	 70.92	0	911486..913768	-	760	86157216	-	Adeh_0789	-	AAA ATPase
787	 64.53	-2	913771..914097	-	108	86157217	-	Adeh_0790	-	ATP-dependent Clp protease adaptor protein ClpS
788	 77.32	0	914227..916188	+	653	86157218	-	Adeh_0791	-	peptidase S9, prolyl oligopeptidase active site region
789	 76.50	0	916211..916912	-	233	86157219	aat	Adeh_0792	-	leucyl/phenylalanyl-tRNA--protein transferase
790	 77.99	0	916954..917748	-	264	86157220	-	Adeh_0793	-	hypothetical protein
791	 72.84	0	917795..918652	-	285	86157221	-	Adeh_0794	-	sigma-24 (FecI-like)
792	 67.59	-1	918944..919594	+	216	86157222	-	Adeh_0795	-	hypothetical protein
793	 75.39	0	919582..922539	+	985	86157223	-	Adeh_0796	-	4Fe-4S ferredoxin, iron-sulfur binding protein
794	 67.22	-1	922536..923972	+	478	86157224	-	Adeh_0797	-	polysulphide reductase, NrfD
74.55	MEAN

4.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.