IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4045	 72.29	0	4669422..4670435	-	337	86160475	-	Adeh_4059	-	3-deoxy-D-arabinoheptulosonate-7-phosphate synthase
4046	 76.85	0	4670672..4671535	+	287	86160476	-	Adeh_4060	-	alpha/beta hydrolase fold acetyltransferase
4047	 76.13	0	4671605..4672048	+	147	86160477	-	Adeh_4061	-	hypothetical protein
4048	 72.55	0	4672680..4673189	-	169	86160478	-	Adeh_4062	-	hypothetical protein
4049	 67.43	-1	4673479..4674132	-	217	86160479	-	Adeh_4063	-	putative translaldolase
4050	 74.31	0	4674219..4675265	+	348	86160480	-	Adeh_4064	-	KpsF/GutQ family protein
4051	 80.08	+1	4675272..4675979	+	235	86160481	-	Adeh_4065	-	class II aldolase/adducin-like
4052	 79.55	+1	4676072..4676560	-	162	86160482	-	Adeh_4066	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
4053	 73.97	0	4676590..4677342	-	250	86160483	-	Adeh_4067	-	5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
4054	 76.14	0	4677339..4678151	-	270	86160484	-	Adeh_4068	-	dihydrodipicolinate reductase
4055	 72.30	0	4678167..4679054	-	295	86160485	-	Adeh_4069	-	dihydrodipicolinate synthase
4056	 72.59	0	4679093..4680376	-	427	86160486	-	Adeh_4070	-	diaminopimelate decarboxylase
4057	 75.64	0	4680588..4681991	-	467	86160487	-	Adeh_4071	-	argininosuccinate lyase
4058	 70.86	0	4682110..4682514	+	134	86160488	-	Adeh_4072	-	hypothetical protein
4059	 72.01	0	4682608..4684515	-	635	86160489	-	Adeh_4073	-	hypothetical protein
4060	 72.64	0	4684843..4685244	-	133	86160490	-	Adeh_4074	-	methylmalonyl-CoA epimerase
4061	 76.10	0	4685314..4686861	-	515	86160491	-	Adeh_4075	-	transglutaminase-like
4062	 77.72	0	4686935..4687540	+	201	86160492	-	Adeh_4076	-	nucleoside recognition
4063	 76.61	0	4687537..4688079	+	180	86160493	-	Adeh_4077	-	nucleoside recognition
4064	 72.20	0	4688081..4688821	-	246	86160494	-	Adeh_4078	-	Acyl-ACP thioesterase
4065	 80.37	+1	4688945..4689703	+	252	86160495	-	Adeh_4079	-	hypothetical protein
4066	 79.93	+1	4689700..4690302	+	200	86160496	-	Adeh_4080	-	hypothetical protein
4067	 80.86	+1	4690299..4691066	-	255	86160497	-	Adeh_4081	-	heat shock protein DnaJ-like
4068	 77.28	0	4691232..4692041	+	269	86160498	-	Adeh_4082	-	4Fe-4S ferredoxin, iron-sulfur binding protein
4069	 79.17	+1	4692058..4692489	+	143	86160499	-	Adeh_4083	-	hypothetical protein
4070	 75.03	0	4692486..4693466	+	326	86160500	-	Adeh_4084	-	zinc-binding alcohol dehydrogenase
4071	 75.06	0	4693516..4695135	-	539	86160501	-	Adeh_4085	-	hypothetical protein
4072	 78.04	0	4695582..4696724	+	380	86160502	-	Adeh_4086	-	glycosyl transferase, group 1
4073	 73.94	0	4696728..4697387	-	219	86160503	-	Adeh_4087	-	hypothetical protein
4074	 74.26	0	4697580..4698251	+	223	86160504	-	Adeh_4088	-	hypothetical protein
4075	 78.78	0	4698258..4699124	+	288	86160505	-	Adeh_4089	-	hypothetical protein
4076	 78.08	0	4699630..4701075	+	481	86160506	-	Adeh_4090	-	membrane protein
4077	 82.16	+1	4701150..4702853	+	567	86160507	-	Adeh_4091	-	hypothetical protein
4078	 72.15	0	4702940..4704691	+	583	86160508	-	Adeh_4092	-	OPT family oligopeptide transporter
4079	 79.88	+1	4704702..4705034	+	110	86160509	-	Adeh_4093	-	hypothetical protein
4080	 69.79	-1	4705329..4705808	+	159	86160510	-	Adeh_4094	-	GTP cyclohydrolase I
4081	 80.80	+1	4705933..4707177	+	414	86160511	-	Adeh_4095	-	glycosyl transferase, group 1
4082	 80.62	+1	4707203..4709194	+	663	86160512	-	Adeh_4096	-	serine/threonine protein kinase
4083	 77.14	0	4709243..4710799	+	518	86160513	-	Adeh_4097	-	leucyl aminopeptidase
4084	 76.24	0	4710827..4711108	-	93	86160514	-	Adeh_4098	-	hypothetical protein
4085	 75.59	0	4711274..4711822	+	182	86160515	-	Adeh_4099	-	inorganic diphosphatase
4086	 69.15	-1	4711954..4712355	+	133	86160516	-	Adeh_4100	-	hemerythrin-like, metal-binding protein
4087	 77.00	0	4712565..4713677	+	370	86160517	-	Adeh_4101	-	arginase/agmatinase/formiminoglutamase
4088	 73.79	0	4713772..4714080	-	102	86160518	-	Adeh_4102	-	hypothetical protein
4089	 75.67	0	4714267..4715310	+	347	86160519	-	Adeh_4103	-	histidinol phosphate aminotransferase
4090	 68.46	-1	4715325..4718609	-	1094	86160520	-	Adeh_4104	-	heavy metal efflux pump CzcA
4091	 75.57	0	4718613..4720196	-	527	86160521	-	Adeh_4105	-	secretion protein HlyD
4092	 79.47	+1	4720193..4721614	-	473	86160522	-	Adeh_4106	-	outer membrane efflux protein
4093	 83.18	+1	4721816..4723105	+	429	86160523	-	Adeh_4107	-	tRNA and rRNA cytosine-C5-methylase
4094	 74.88	0	4723116..4723529	-	137	86160524	-	Adeh_4108	-	MarR family transcriptional regulator
4095	 72.40	0	4723610..4723993	-	127	86160525	-	Adeh_4109	-	cation membrane transporter
4096	 69.16	-1	4724046..4724366	-	106	86160526	-	Adeh_4110	-	SugE protein
4097	 71.72	0	4724557..4726239	-	560	86160527	-	Adeh_4111	-	dihydroxy-acid dehydratase
4098	 78.64	0	4726363..4727022	+	219	86160528	-	Adeh_4112	-	NUDIX hydrolase
4099	 77.34	0	4727086..4728696	+	536	86160529	-	Adeh_4113	-	hypothetical protein
4100	 87.07	+2	4728708..4729256	+	182	86160530	-	Adeh_4114	-	hypothetical protein
4101	 83.47	+1	4729308..4730432	+	374	86160531	-	Adeh_4115	-	Sel1 family protein
4102	 75.18	0	4730782..4731192	-	136	86160532	-	Adeh_4116	-	response regulator receiver domain-containing protein
4103	 71.61	0	4731609..4733045	+	478	86160533	-	Adeh_4117	-	IgA peptidase. metallo peptidase. MEROPS family M64
4104	 71.14	0	4733232..4734974	+	580	86160534	-	Adeh_4118	-	Acyl-CoA dehydrogenase
4105	 77.10	0	4735066..4735755	-	229	86160535	-	Adeh_4119	-	glycine cleavage H-protein
4106	 78.89	0	4736140..4736736	+	198	86160536	-	Adeh_4120	-	hypothetical protein
4107	 76.76	0	4736742..4738880	-	712	86160537	-	Adeh_4121	-	multi-sensor signal transduction histidine kinase
4108	 69.51	-1	4739079..4744640	+	1853	86160538	-	Adeh_4122	-	GAF sensor hybrid histidine kinase
4109	 79.09	+1	4744922..4746193	+	423	86160539	-	Adeh_4123	-	homospermidine synthase-like
4110	 77.90	0	4746525..4747628	+	367	86160540	-	Adeh_4124	-	hypothetical protein
4111	 79.75	+1	4747664..4748458	+	264	86160541	-	Adeh_4125	-	hypothetical protein
4112	 72.74	0	4748460..4749101	-	213	86160542	-	Adeh_4126	-	hypothetical protein
4113	 75.21	0	4749295..4750932	+	545	86160543	-	Adeh_4127	-	Alpha amylase, catalytic region
4114	 72.64	0	4751387..4752391	+	334	86160544	-	Adeh_4128	-	HNH endonuclease
4115	 73.90	0	4752432..4752680	+	82	86160545	-	Adeh_4129	-	hypothetical protein
4116	 70.45	0	4752697..4753728	-	343	86160546	-	Adeh_4130	-	hypothetical protein
4117	 64.60	-2	4753860..4754342	-	160	86160547	-	Adeh_4131	-	pullanase-associated protein
4118	 67.46	-1	4754431..4755822	-	463	86160548	-	Adeh_4132	-	porin, LamB type
4119	 67.04	-1	4755910..4756713	-	267	86160549	-	Adeh_4133	-	membrane-anchored protein
4120	 68.24	-1	4756752..4757639	-	295	86160550	-	Adeh_4134	-	ABC sugar transporter, inner membrane subunit
4121	 73.92	0	4757639..4759348	-	569	86160551	-	Adeh_4135	-	ABC sugar transporter, inner membrane subunit
4122	 70.07	0	4759345..4760547	-	400	86160552	-	Adeh_4136	-	ABC sugar transporter, periplasmic ligand binding protein
4123	 71.53	0	4760570..4761658	-	362	86160553	-	Adeh_4137	-	ABC transporter, ATPase subunit
4124	 75.09	0	4761797..4763398	-	533	86160554	-	Adeh_4138	-	Alpha amylase
4125	 79.24	+1	4763461..4764279	-	272	86160555	-	Adeh_4139	-	uncharacterized protein linocin/CFP29
4126	 73.33	0	4764276..4764635	-	119	86160556	-	Adeh_4140	-	hypothetical protein
4127	 77.83	0	4764716..4765378	+	220	86160557	-	Adeh_4141	-	hypothetical protein
4128	 74.40	0	4765451..4765825	+	124	86160558	-	Adeh_4142	-	response regulator receiver domain-containing protein
4129	 74.16	0	4765854..4768376	-	840	86160559	-	Adeh_4143	-	RND efflux transporter
4130	 78.83	0	4768389..4769120	-	243	86160560	-	Adeh_4144	-	metallophosphoesterase
4131	 75.77	0	4769117..4769863	-	248	86160561	-	Adeh_4145	-	phospholipid/glycerol acyltransferase
4132	 77.16	0	4769860..4770564	-	234	86160562	-	Adeh_4146	-	phospholipid/glycerol acyltransferase
4133	 80.18	+1	4770583..4771722	-	379	86160563	-	Adeh_4147	-	phosphatidylinositol alpha-mannosyltransferase
4134	 77.56	0	4771732..4772511	-	259	86160564	-	Adeh_4148	-	CDP-alcohol phosphatidyltransferase
4135	 68.96	-1	4772518..4773825	-	435	86160565	-	Adeh_4149	-	inositol-3-phosphate synthase
4136	 79.91	+1	4774005..4775129	-	374	86160566	-	Adeh_4150	-	hypothetical protein
4137	 78.77	0	4775248..4775751	+	167	86160567	-	Adeh_4151	-	DoxX
4138	 79.51	+1	4775956..4776687	+	243	86160568	-	Adeh_4152	-	hypothetical protein
4139	 76.71	0	4776707..4778050	+	447	86160569	-	Adeh_4153	-	outer membrane efflux protein
4140	 73.86	0	4778051..4779427	+	458	86160570	-	Adeh_4154	-	secretion protein HlyD
4141	 74.66	0	4779430..4780155	+	241	86160571	-	Adeh_4155	-	ABC transporter, ATPase subunit
4142	 72.68	0	4780152..4781414	+	420	86160572	-	Adeh_4156	-	ABC transporter, inner membrane subunit
4143	 70.29	0	4781411..4782652	+	413	86160573	-	Adeh_4157	-	ABC transporter, inner membrane subunit
4144	 71.88	0	4782667..4783356	+	229	86160574	-	Adeh_4158	-	signal peptidase I
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.