IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3975	 74.47	0	4602767..4604047	+	426	86160405	-	Adeh_3989	-	major facilitator superfamily transporter
3976	 69.16	-1	4604233..4605195	+	320	86160406	-	Adeh_3990	-	hypothetical protein
3977	 65.01	-2	4605550..4605912	-	120	86160407	-	Adeh_3991	-	hypothetical protein
3978	 65.48	-2	4605887..4606306	-	139	86160408	-	Adeh_3992	-	hypothetical protein
3979	 71.39	0	4606326..4606706	-	126	86160409	-	Adeh_3993	-	hypothetical protein
3980	 74.63	0	4606799..4607614	-	271	86160410	-	Adeh_3994	-	glycosyl transferase family protein
3981	 80.71	+1	4607722..4608198	+	158	86160411	-	Adeh_3995	-	hypothetical protein
3982	 81.24	+1	4608202..4609155	+	317	86160412	-	Adeh_3996	-	putative RNA methylase
3983	 75.96	0	4609225..4610160	+	311	86160413	-	Adeh_3997	-	ABC transporter, ATPase subunit
3984	 77.43	0	4610093..4610854	+	253	86160414	-	Adeh_3998	-	ABC transporter, inner membrane subunit
3985	 75.77	0	4610955..4611602	+	215	86160415	-	Adeh_3999	-	hypothetical protein
3986	 80.48	+1	4611599..4612387	+	262	86160416	-	Adeh_4000	-	hypothetical protein
3987	 75.95	0	4612384..4612986	+	200	86160417	-	Adeh_4001	-	phosphoesterase, PA-phosphatase related
3988	 70.51	0	4613159..4613860	-	233	86160418	-	Adeh_4002	-	phosphate uptake regulator, PhoU
3989	 70.60	0	4613893..4614681	-	262	86160419	-	Adeh_4003	-	phosphate ABC transporter permease
3990	 74.75	0	4614683..4615597	-	304	86160420	-	Adeh_4004	-	ABC phosphate transporter, inner membrane subunit
3991	 71.61	0	4615594..4616604	-	336	86160421	-	Adeh_4005	-	phosphate ABC transporter inner membrane protein
3992	 68.74	-1	4616656..4617474	-	272	86160422	-	Adeh_4006	-	ABC transporter, periplasmic phosphate binding protein
3993	 69.42	-1	4617589..4618857	-	422	86160423	-	Adeh_4007	-	hypothetical protein
3994	 77.28	0	4618956..4620086	-	376	86160424	-	Adeh_4008	-	histidine kinase
3995	 71.14	0	4620094..4620786	-	230	86160425	-	Adeh_4009	-	two component transcriptional regulator
3996	 82.04	+1	4620878..4621957	+	359	86160426	-	Adeh_4010	-	OmpA/MotB family outer membrane protein
3997	 75.38	0	4622046..4622963	+	305	86160427	-	Adeh_4011	-	diguanylate cyclase
3998	 77.06	0	4622972..4624135	+	387	86160428	-	Adeh_4012	-	putative RNA methylase
3999	 80.48	+1	4624174..4624716	+	180	86160429	-	Adeh_4013	-	hypothetical protein
4000	 80.46	+1	4624873..4626003	-	376	86160430	-	Adeh_4014	-	hypothetical protein
4001	 76.79	0	4626019..4626186	-	55	86160431	-	Adeh_4015	-	hypothetical protein
4002	 75.24	0	4626232..4626756	-	174	86160432	-	Adeh_4016	-	hypothetical protein
4003	 76.37	0	4626775..4627938	-	387	86160433	-	Adeh_4017	-	major facilitator transporter
4004	 70.86	0	4627973..4629046	-	357	86160434	-	Adeh_4018	-	HNH endonuclease
4005	 71.83	0	4629456..4629959	-	167	86160435	-	Adeh_4019	-	hypothetical protein
4006	 70.46	0	4630073..4631443	-	456	86160436	-	Adeh_4020	-	amino acid/peptide transporter
4007	 71.56	0	4631487..4632794	-	435	86160437	-	Adeh_4021	-	amino acid/peptide transporter
4008	 76.70	0	4632855..4633163	+	102	86160438	-	Adeh_4022	-	rhodanese-like protein
4009	 77.98	0	4633170..4633496	-	108	86160439	-	Adeh_4023	-	hypothetical protein
4010	 72.03	0	4633632..4633985	+	117	86160440	-	Adeh_4024	-	pterin-4-alpha-carbinolamine dehydratase
4011	 80.62	+1	4634061..4634447	+	128	86160441	-	Adeh_4025	-	hypothetical protein
4012	 75.15	0	4634560..4635762	+	400	86160442	-	Adeh_4026	-	metallophosphoesterase
4013	 83.16	+1	4635903..4638224	+	773	86160443	-	Adeh_4027	-	hypothetical protein
4014	 78.60	0	4638258..4638785	+	175	86160444	-	Adeh_4028	-	hypothetical protein
4015	 74.88	0	4638798..4639637	-	279	86160445	-	Adeh_4029	-	silent information regulator protein Sir2
4016	 78.20	0	4639639..4640505	-	288	86160446	-	Adeh_4030	-	ABC transporter, periplasmic ligand binding protein
4017	 70.63	0	4640554..4640931	+	125	86160447	apaG	Adeh_4031	-	ApaG
4018	 81.98	+1	4640948..4642384	-	478	86160448	-	Adeh_4032	-	general secretory system II, protein E-like
4019	 74.21	0	4642465..4642941	-	158	86160449	-	Adeh_4033	-	biopolymer transport protein ExbD/TolR
4020	 73.50	0	4642945..4643646	-	233	86160450	-	Adeh_4034	-	MotA/TolQ/ExbB proton channel
4021	 79.95	+1	4643765..4644637	-	290	86160451	-	Adeh_4035	-	hypothetical protein
4022	 82.49	+1	4644647..4645537	-	296	86160452	-	Adeh_4036	-	hypothetical protein
4023	 80.94	+1	4645563..4646543	-	326	86160453	-	Adeh_4037	-	MaoC-like dehydratase
4024	 74.02	0	4646551..4646985	-	144	86160454	-	Adeh_4038	-	MaoC-like dehydratase
4025	 78.79	0	4646998..4647987	-	329	86160455	-	Adeh_4039	-	dihydrodipicolinate reductase
4026	 71.95	0	4648201..4648806	-	201	86160456	-	Adeh_4040	-	electron transport protein SCO1/SenC like
4027	 77.34	0	4648836..4649987	+	383	86160457	-	Adeh_4041	-	hypothetical protein
4028	 71.52	0	4650473..4651543	+	356	86160458	-	Adeh_4042	-	HNH endonuclease
4029	 77.56	0	4651545..4652792	-	415	86160459	-	Adeh_4043	-	penicillin-binding protein, transpeptidase
4030	 73.04	0	4652913..4655801	-	962	86160460	-	Adeh_4044	-	pyruvate phosphate dikinase
4031	 71.88	0	4655979..4657034	-	351	86160461	-	Adeh_4045	-	thiamine biosynthesis protein
4032	 71.37	0	4657065..4657319	-	84	86160462	-	Adeh_4046	-	SirA-like
4033	 79.03	0	4657418..4657951	+	177	86160463	-	Adeh_4047	-	hypothetical protein
4034	 76.85	0	4657956..4658780	+	274	86160464	-	Adeh_4048	-	hypothetical protein
4035	 74.40	0	4658925..4660940	+	671	86160465	-	Adeh_4049	-	DsbA oxidoreductase
4036	 74.65	0	4660918..4661769	+	283	86160466	-	Adeh_4050	-	glycosyl transferase family protein
4037	 66.92	-1	4661861..4662256	+	131	86160467	-	Adeh_4051	-	L-aspartate 1-decarboxylase
4038	 76.62	0	4662284..4663870	+	528	86160468	-	Adeh_4052	-	anthranilate synthase, component I
4039	 73.17	0	4663867..4664481	+	204	86160469	-	Adeh_4053	-	anthranilate synthase, component II
4040	 76.13	0	4664478..4665491	+	337	86160470	-	Adeh_4054	-	anthranilate phosphoribosyltransferase
4041	 79.69	+1	4665488..4666270	+	260	86160471	-	Adeh_4055	-	indole-3-glycerol phosphate synthase
4042	 77.72	0	4666270..4666893	+	207	86160472	-	Adeh_4056	-	phosphoribosylanthranilate isomerase
4043	 74.85	0	4666890..4668185	+	431	86160473	-	Adeh_4057	-	tryptophan synthase subunit beta
4044	 78.21	0	4668182..4669039	+	285	86160474	-	Adeh_4058	-	tryptophan synthase, alpha chain
4045	 72.29	0	4669422..4670435	-	337	86160475	-	Adeh_4059	-	3-deoxy-D-arabinoheptulosonate-7-phosphate synthase
4046	 76.85	0	4670672..4671535	+	287	86160476	-	Adeh_4060	-	alpha/beta hydrolase fold acetyltransferase
4047	 76.13	0	4671605..4672048	+	147	86160477	-	Adeh_4061	-	hypothetical protein
4048	 72.55	0	4672680..4673189	-	169	86160478	-	Adeh_4062	-	hypothetical protein
4049	 67.43	-1	4673479..4674132	-	217	86160479	-	Adeh_4063	-	putative translaldolase
4050	 74.31	0	4674219..4675265	+	348	86160480	-	Adeh_4064	-	KpsF/GutQ family protein
4051	 80.08	+1	4675272..4675979	+	235	86160481	-	Adeh_4065	-	class II aldolase/adducin-like
4052	 79.55	+1	4676072..4676560	-	162	86160482	-	Adeh_4066	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
4053	 73.97	0	4676590..4677342	-	250	86160483	-	Adeh_4067	-	5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
4054	 76.14	0	4677339..4678151	-	270	86160484	-	Adeh_4068	-	dihydrodipicolinate reductase
4055	 72.30	0	4678167..4679054	-	295	86160485	-	Adeh_4069	-	dihydrodipicolinate synthase
4056	 72.59	0	4679093..4680376	-	427	86160486	-	Adeh_4070	-	diaminopimelate decarboxylase
4057	 75.64	0	4680588..4681991	-	467	86160487	-	Adeh_4071	-	argininosuccinate lyase
4058	 70.86	0	4682110..4682514	+	134	86160488	-	Adeh_4072	-	hypothetical protein
4059	 72.01	0	4682608..4684515	-	635	86160489	-	Adeh_4073	-	hypothetical protein
4060	 72.64	0	4684843..4685244	-	133	86160490	-	Adeh_4074	-	methylmalonyl-CoA epimerase
4061	 76.10	0	4685314..4686861	-	515	86160491	-	Adeh_4075	-	transglutaminase-like
4062	 77.72	0	4686935..4687540	+	201	86160492	-	Adeh_4076	-	nucleoside recognition
4063	 76.61	0	4687537..4688079	+	180	86160493	-	Adeh_4077	-	nucleoside recognition
4064	 72.20	0	4688081..4688821	-	246	86160494	-	Adeh_4078	-	Acyl-ACP thioesterase
4065	 80.37	+1	4688945..4689703	+	252	86160495	-	Adeh_4079	-	hypothetical protein
4066	 79.93	+1	4689700..4690302	+	200	86160496	-	Adeh_4080	-	hypothetical protein
4067	 80.86	+1	4690299..4691066	-	255	86160497	-	Adeh_4081	-	heat shock protein DnaJ-like
4068	 77.28	0	4691232..4692041	+	269	86160498	-	Adeh_4082	-	4Fe-4S ferredoxin, iron-sulfur binding protein
4069	 79.17	+1	4692058..4692489	+	143	86160499	-	Adeh_4083	-	hypothetical protein
4070	 75.03	0	4692486..4693466	+	326	86160500	-	Adeh_4084	-	zinc-binding alcohol dehydrogenase
4071	 75.06	0	4693516..4695135	-	539	86160501	-	Adeh_4085	-	hypothetical protein
4072	 78.04	0	4695582..4696724	+	380	86160502	-	Adeh_4086	-	glycosyl transferase, group 1
4073	 73.94	0	4696728..4697387	-	219	86160503	-	Adeh_4087	-	hypothetical protein
4074	 74.26	0	4697580..4698251	+	223	86160504	-	Adeh_4088	-	hypothetical protein
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.