IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3499	 76.45	0	4028715..4028990	-	91	86159929	-	Adeh_3511	-	hypothetical protein
3500	 73.31	0	4029216..4029938	+	240	86159930	-	Adeh_3512	-	hemerythrin HHE cation binding protein
3501	 75.75	0	4030157..4031686	-	509	86159931	-	Adeh_3513	-	methyl-accepting chemotaxis sensory transducer
3502	 71.16	0	4031993..4035196	+	1067	86159932	carB	Adeh_3514	-	carbamoyl phosphate synthase large subunit
3503	 78.14	0	4035270..4036106	+	278	86159933	-	Adeh_3515	-	thiosulfate sulfurtransferase
3504	 71.97	0	4036209..4038284	-	691	86159934	-	Adeh_3516	-	hypothetical protein
3505	 65.42	-2	4038563..4040401	-	612	86159935	-	Adeh_3517	-	hyalin
3506	 76.41	0	4040753..4041142	+	129	86159936	-	Adeh_3518	-	response regulator receiver domain-containing protein
3507	 78.88	0	4041139..4041891	+	250	86159937	-	Adeh_3519	-	hypothetical protein
3508	 79.39	+1	4041869..4042921	+	350	86159938	-	Adeh_3520	-	HEAT repeat-containing protein
3509	 72.29	0	4042918..4044357	+	479	86159939	-	Adeh_3521	-	glycosyl transferase family protein
3510	 69.74	-1	4044396..4045532	+	378	86159940	-	Adeh_3522	-	HflK protein
3511	 69.53	-1	4045529..4046470	+	313	86159941	-	Adeh_3523	-	HflC protein
3512	 70.94	0	4047255..4052501	+	1748	86159942	-	Adeh_3524	-	peptidase S8 and S53
3513	 76.05	0	4052581..4053390	+	269	86159943	-	Adeh_3525	-	hypothetical protein
3514	 76.19	0	4053492..4054289	+	265	86159944	-	Adeh_3526	-	XRE family transcriptional regulator
3515	 75.96	0	4054286..4055296	+	336	86159945	-	Adeh_3527	-	zinc-binding alcohol dehydrogenase
3516	 78.93	0	4055424..4055798	+	124	86159946	-	Adeh_3528	-	hypothetical protein
3517	 72.67	0	4055860..4059126	-	1088	86159947	-	Adeh_3529	-	PAS/PAC sensor hybrid histidine kinase
3518	 78.51	0	4059262..4059717	+	151	86159948	-	Adeh_3530	-	hypothetical protein
3519	 71.07	0	4059753..4060115	-	120	86159949	-	Adeh_3531	-	FMN-binding pyridoxamine 5'-phosphate oxidase-related protein
3520	 75.87	0	4060135..4061340	-	401	86159950	-	Adeh_3532	-	GAF sensor signal transduction histidine kinase
3521	 71.61	0	4061651..4062844	+	397	86159951	-	Adeh_3533	-	hypothetical protein
3522	 76.39	0	4062841..4063992	+	383	86159952	-	Adeh_3534	-	peptidase M48, Ste24p
3523	 66.35	-1	4064012..4064323	-	103	86159953	-	Adeh_3535	-	XRE family transcriptional regulator
3524	 64.54	-2	4064320..4064601	-	93	86159954	-	Adeh_3536	-	hypothetical protein
3525	 70.48	0	4064729..4065043	+	104	86159955	-	Adeh_3537	-	hypothetical protein
3526	 65.28	-2	4065257..4065688	-	143	86159956	-	Adeh_3538	-	hypothetical protein
3527	 63.72	-2	4065681..4066835	-	384	86159957	-	Adeh_3539	-	hypothetical protein
3528	 57.51	-2	4066989..4068167	-	392	86159958	-	Adeh_3540	-	hypothetical protein
3529	 63.70	-2	4068219..4068959	-	246	86159959	-	Adeh_3541	-	hypothetical protein
3530	 64.05	-2	4069008..4069313	-	101	86159960	-	Adeh_3542	-	hypothetical protein
3531	 68.11	-1	4069310..4070698	-	462	86159961	-	Adeh_3543	-	hypothetical protein
3532	 63.07	-2	4070730..4071647	-	305	86159962	-	Adeh_3544	-	restriction endonuclease
3533	 69.44	-1	4072158..4072589	-	143	86159963	-	Adeh_3545	-	hypothetical protein
3534	 64.47	-2	4072711..4073982	+	423	86159964	-	Adeh_3546	-	hypothetical protein
3535	 63.67	-2	4074092..4075024	+	310	86159965	-	Adeh_3547	-	hypothetical protein
3536	 64.75	-2	4075057..4075578	-	173	86159966	-	Adeh_3548	-	hypothetical protein
3537	 62.40	-2	4075580..4075954	+	124	86159967	-	Adeh_3549	-	hypothetical protein
3538	 63.95	-2	4076698..4077801	+	367	86159968	-	Adeh_3550	-	hypothetical protein
3539	 70.76	0	4077985..4078962	+	325	86159969	-	Adeh_3551	-	hypothetical protein
3540	 69.22	-1	4079280..4080062	+	260	86159970	-	Adeh_3552	-	hypothetical protein
3541	 68.93	-1	4080065..4080904	+	279	86159971	-	Adeh_3553	-	hypothetical protein
3542	 65.42	-2	4081002..4081322	-	106	86159972	-	Adeh_3554	-	hypothetical protein
3543	 60.97	-2	4081982..4082929	+	315	86159973	-	Adeh_3555	-	hypothetical protein
3544	 60.37	-2	4083487..4083756	+	89	86159974	-	Adeh_3556	-	hypothetical protein
3545	 62.45	-2	4084156..4084962	+	268	86159975	-	Adeh_3557	-	hypothetical protein
3546	 63.00	-2	4085155..4086246	-	363	86159976	-	Adeh_3558	-	HNH endonuclease
3547	 62.74	-2	4086566..4087456	+	296	86159977	-	Adeh_3559	-	hypothetical protein
3548	 67.38	-1	4087807..4088085	+	92	86159978	-	Adeh_3560	-	hypothetical protein
3549	 67.39	-1	4088113..4088940	+	275	86159979	-	Adeh_3561	-	Phage integrase
3550	 77.98	0	4089419..4090399	+	326	86159980	-	Adeh_3562	-	glycosyl transferase family protein
3551	 68.05	-1	4090663..4091313	-	216	86159981	-	Adeh_3563	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
3552	 78.57	0	4091310..4092611	-	433	86159982	-	Adeh_3564	-	hypothetical protein
3553	 72.22	0	4092615..4093244	-	209	86159983	-	Adeh_3565	-	lytic transglycosylase, catalytic
3554	 71.70	0	4093317..4094924	+	535	86159984	-	Adeh_3566	-	L-aspartate oxidase
3555	 76.40	0	4094950..4095576	-	208	86159985	-	Adeh_3567	-	hypothetical protein
3556	 73.68	0	4095573..4096142	-	189	86159986	-	Adeh_3568	-	orotate phosphoribosyltransferase
3557	 78.05	0	4096139..4096981	-	280	86159987	-	Adeh_3569	-	ParB-like nuclease
3558	 74.77	0	4097069..4097611	-	180	86159988	-	Adeh_3570	-	hypothetical protein
3559	 65.94	-1	4097615..4098028	-	137	86159989	-	Adeh_3571	-	hypothetical protein
3560	 75.80	0	4098106..4098981	-	291	86159990	-	Adeh_3572	-	Alpha/beta hydrolase fold-1
3561	 82.90	+1	4099014..4099586	-	190	86159991	-	Adeh_3573	-	putative ribonuclease E
3562	 79.97	+1	4099640..4100263	-	207	86159992	-	Adeh_3574	-	response regulator receiver domain-containing protein
3563	 72.94	0	4100370..4101182	+	270	86159993	-	Adeh_3575	-	Nitrilase/cyanide hydratase
3564	 71.17	0	4101267..4101977	-	236	86159994	-	Adeh_3576	-	hypothetical protein
3565	 70.30	0	4101977..4102912	-	311	86159995	-	Adeh_3577	-	fibronectin, type III
3566	 78.33	0	4103055..4104074	-	339	86159996	-	Adeh_3578	-	aspartate semialdehyde dehydrogenase
3567	 80.38	+1	4104137..4105033	-	298	86159997	-	Adeh_3579	-	hypothetical protein
3568	 77.14	0	4105101..4106570	-	489	86159998	-	Adeh_3580	-	peptidase M50
3569	 80.03	+1	4106603..4107373	-	256	86159999	-	Adeh_3581	-	peptidase M22, glycoprotease
3570	 73.19	0	4107383..4109068	-	561	86160000	-	Adeh_3582	-	peptidase M50, putative membrane-associated zinc metallopeptidase
3571	 75.49	0	4109154..4110377	-	407	86160001	-	Adeh_3583	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase
3572	 73.40	0	4110378..4111223	-	281	86160002	-	Adeh_3584	-	phosphatidate cytidylyltransferase
3573	 74.74	0	4111233..4111988	-	251	86160003	-	Adeh_3585	-	undecaprenyl pyrophosphate synthetase
3574	 75.18	0	4112055..4113146	+	363	86160004	-	Adeh_3586	-	serine/threonine protein kinase
3575	 81.42	+1	4113185..4113862	+	225	86160005	-	Adeh_3587	-	hypothetical protein
3576	 71.92	0	4113875..4114768	+	297	86160006	-	Adeh_3588	-	DNA replication protein-like
3577	 74.57	0	4114779..4115942	-	387	86160007	-	Adeh_3589	-	aspartate kinase
3578	 70.41	0	4116738..4117004	+	88	86160008	-	Adeh_3590	-	DNA-directed RNA polymerase, omega subunit
3579	 77.08	0	4117060..4117731	-	223	86160009	-	Adeh_3591	-	hypothetical protein
3580	 73.87	0	4117731..4118480	-	249	86160010	-	Adeh_3592	-	hypothetical protein
3581	 64.97	-2	4118747..4119040	+	97	86160011	-	Adeh_3593	-	chaperonin Cpn10, GroES
3582	 67.52	-1	4119080..4120723	+	547	86160012	groEL	Adeh_3594	-	chaperonin GroEL
3583	 76.35	0	4120788..4122377	+	529	86160013	-	Adeh_3595	-	hypothetical protein
3584	 74.62	0	4122445..4123941	+	498	86160014	-	Adeh_3596	-	hypothetical protein
3585	 77.46	0	4124063..4124377	+	104	86160015	-	Adeh_3597	-	hypothetical protein
3586	 78.16	0	4124386..4124820	-	144	86160016	-	Adeh_3598	-	hypothetical protein
3587	 77.54	0	4124830..4127166	-	778	86160017	-	Adeh_3599	-	fimbrial biogenesis outer membrane usher protein
3588	 78.35	0	4127163..4127915	-	250	86160018	-	Adeh_3600	-	P pilus assembly protein chaperone PapD-like
3589	 72.88	0	4127989..4128471	+	160	86160019	-	Adeh_3601	-	spore coat U
3590	 73.49	0	4128674..4129171	+	165	86160020	-	Adeh_3602	-	spore coat U
3591	 77.99	0	4129262..4129879	-	205	86160021	-	Adeh_3603	-	peptidyl-prolyl cis-trans isomerase, cyclophilin type
3592	 69.57	-1	4129950..4130363	-	137	86160022	-	Adeh_3604	-	large-conductance mechanosensitive channel-like
3593	 73.04	0	4130362..4131099	+	245	86160023	-	Adeh_3605	-	aquaporin Z
3594	 67.56	-1	4131173..4131619	-	148	86160024	-	Adeh_3606	-	large conductance mechanosensitive channel protein
3595	 75.58	0	4131616..4132266	-	216	86160025	-	Adeh_3607	-	methyltransferase type 11
3596	 73.91	0	4132349..4132762	-	137	86160026	-	Adeh_3608	-	hypothetical protein
3597	 76.95	0	4133268..4137284	+	1338	86160027	-	Adeh_3609	-	TPR repeat-containing protein
3598	 71.12	0	4137364..4137879	+	171	86160028	-	Adeh_3610	-	hypothetical protein
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.