IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.55   STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3394	 72.43	0	3917670..3920255	+	861	86159824	-	Adeh_3405	-	DEAD/DEAH box helicase-like
3395	 78.22	0	3920271..3921023	-	250	86159825	-	Adeh_3406	-	hypothetical protein
3396	 72.96	0	3921131..3921400	+	89	86159826	-	Adeh_3407	-	hypothetical protein
3397	 76.62	0	3921360..3922283	-	307	86159827	-	Adeh_3408	-	hypothetical protein
3398	 77.69	0	3922889..3923260	-	123	86159828	-	Adeh_3409	-	class I peptide chain release factor
3399	 74.44	0	3923257..3923976	-	239	86159829	-	Adeh_3410	-	ABC transporter, ATPase subunit
3400	 74.71	0	3923969..3925186	-	405	86159830	-	Adeh_3411	-	ABC transporter, inner membrane subunit
3401	 81.68	+1	3925176..3926507	-	443	86159831	-	Adeh_3412	-	secretion protein HlyD
3402	 73.98	0	3926600..3928171	+	523	86159832	-	Adeh_3413	-	transglutaminase-like
3403	 77.78	0	3928168..3929085	+	305	86159833	-	Adeh_3414	-	hypothetical protein
3404	 81.95	+1	3929082..3930998	+	638	86159834	-	Adeh_3415	-	TPR repeat-containing protein
3405	 78.74	0	3931028..3932311	+	427	86159835	-	Adeh_3416	-	hypothetical protein
3406	 75.71	0	3932321..3933547	+	408	86159836	-	Adeh_3417	-	hypothetical protein
3407	 81.70	+1	3933639..3934403	+	254	86159837	-	Adeh_3418	-	methyltransferase type 11
3408	 76.09	0	3934472..3935638	-	388	86159838	-	Adeh_3419	-	hypothetical protein
3409	 75.05	0	3935771..3936748	+	325	86159839	-	Adeh_3420	-	fumarylacetoacetate (FAA) hydrolase
3410	 75.26	0	3936745..3937407	+	220	86159840	-	Adeh_3421	-	maleylacetoacetate isomerase
3411	 71.91	0	3937404..3938585	+	393	86159841	-	Adeh_3422	-	4-hydroxyphenylpyruvate dioxygenase
3412	 74.09	0	3938590..3939747	+	385	86159842	-	Adeh_3423	-	homogentisate 1,2-dioxygenase
3413	 77.20	0	3939797..3940261	+	154	86159843	-	Adeh_3424	-	hypothetical protein
3414	 77.50	0	3940366..3940974	-	202	86159844	-	Adeh_3425	-	mucin-associated surface protein (MASP), putative
3415	 70.02	0	3941108..3941644	-	178	86159845	-	Adeh_3426	-	hypothetical protein
3416	 77.19	0	3941792..3942979	+	395	86159846	-	Adeh_3427	-	alanine racemase
3417	 75.42	0	3942984..3944045	-	353	86159847	-	Adeh_3428	-	branched-chain amino acid aminotransferase
3418	 78.65	0	3944142..3944600	+	152	86159848	-	Adeh_3429	-	MarR family transcriptional regulator
3419	 79.17	+1	3944716..3945267	-	183	86159849	-	Adeh_3430	-	GCN5-related N-acetyltransferase
3420	 69.51	-1	3945336..3945722	+	128	86159850	-	Adeh_3431	-	hypothetical protein
3421	 77.40	0	3946021..3947157	+	378	86159851	-	Adeh_3432	-	phenylalanyl-tRNA synthetase, alpha subunit
3422	 78.63	0	3947253..3948740	+	495	86159852	-	Adeh_3433	-	amidase
3423	 76.99	0	3948730..3950541	-	603	86159853	-	Adeh_3434	-	TrkA-C
3424	 78.85	0	3950557..3950991	-	144	86159854	-	Adeh_3435	-	hypothetical protein
3425	 83.13	+1	3951059..3951781	-	240	86159855	-	Adeh_3436	-	hypothetical protein
3426	 79.12	+1	3951842..3952387	+	181	86159856	-	Adeh_3437	-	hypothetical protein
3427	 78.97	0	3952384..3953358	-	324	86159857	-	Adeh_3438	-	histone deacetylase superfamily protein
3428	 77.68	0	3953555..3954226	+	223	86159858	-	Adeh_3439	-	hypothetical protein
3429	 79.32	+1	3954234..3954707	-	157	86159859	-	Adeh_3440	-	hypothetical protein
3430	 80.14	+1	3954834..3956102	+	422	86159860	-	Adeh_3441	-	hypothetical protein
3431	 65.35	-2	3956308..3957450	+	380	86159861	-	Adeh_3442	-	DNA-cytosine methyltransferase
3432	 63.76	-2	3957447..3957893	+	148	86159862	-	Adeh_3443	-	T/G mismatch-specific endonuclease
3433	 64.12	-2	3957913..3958698	+	261	86159863	-	Adeh_3444	-	hypothetical protein
3434	 69.47	-1	3958800..3962432	+	1210	86159864	-	Adeh_3445	-	DNA polymerase III, alpha subunit
3435	 74.74	0	3962718..3963485	+	255	86159865	-	Adeh_3446	-	hypothetical protein
3436	 73.48	0	3964207..3964734	+	175	86159866	-	Adeh_3447	-	LuxR family transcriptional regulator
3437	 72.28	0	3964874..3966085	+	403	86159867	-	Adeh_3448	-	L-threonine ammonia-lyase
3438	 75.48	0	3966328..3967008	+	226	86159868	-	Adeh_3449	-	sigma-24 (FecI-like)
3439	 78.98	0	3967021..3970251	+	1076	86159869	-	Adeh_3450	-	WD-40 repeat-containing serine/threonin protein kinase
3440	 78.24	0	3970248..3970748	+	166	86159870	-	Adeh_3451	-	hypothetical protein
3441	 78.73	0	3970755..3971948	-	397	86159871	-	Adeh_3452	-	8-amino-7-oxononanoate synthase
3442	 73.76	0	3971952..3973037	-	361	86159872	-	Adeh_3453	-	biotin synthase
3443	 80.30	+1	3973396..3974319	-	307	86159873	-	Adeh_3454	-	hypothetical protein
3444	 75.45	0	3974463..3975851	+	462	86159874	-	Adeh_3455	-	DNA repair protein RadA
3445	 72.01	0	3975886..3976203	+	105	86159875	-	Adeh_3456	-	hypothetical protein
3446	 73.97	0	3976317..3977795	-	492	86159876	-	Adeh_3457	-	glycerol kinase
3447	 80.53	+1	3977799..3978671	-	290	86159877	-	Adeh_3458	-	Alpha/beta hydrolase fold-1
3448	 69.21	-1	3978803..3979117	+	104	86159878	-	Adeh_3459	-	hypothetical protein
3449	 73.41	0	3979448..3979699	+	83	86159879	-	Adeh_3460	-	hypothetical protein
3450	 80.65	+1	3979696..3980031	+	111	86159880	-	Adeh_3461	-	helix-hairpin-helix DNA-binding, class 1
3451	 79.77	+1	3980404..3982410	+	668	86159881	-	Adeh_3462	-	TonB-dependent receptor
3452	 78.33	0	3982407..3983855	+	482	86159882	-	Adeh_3463	-	hypothetical protein
3453	 80.44	+1	3983843..3984757	+	304	86159883	-	Adeh_3464	-	periplasmic binding protein
3454	 79.18	+1	3984754..3985800	+	348	86159884	-	Adeh_3465	-	ABC Fe3+-siderophore transporter, inner membrane subunit
3455	 77.78	0	3985797..3986606	+	269	86159885	-	Adeh_3466	-	ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit
3456	 74.35	0	3987505..3988857	-	450	86159886	-	Adeh_3468	-	hypothetical protein
3457	 70.46	0	3988899..3989768	+	289	86159887	-	Adeh_3469	-	UDP-glucose pyrophosphorylase
3458	 79.95	+1	3989765..3990532	+	255	86159888	-	Adeh_3470	-	hypothetical protein
3459	 73.20	0	3990591..3992060	-	489	86159889	-	Adeh_3471	-	two component, sigma54 specific, Fis family transcriptional regulator
3460	 74.02	0	3992057..3993619	-	520	86159890	-	Adeh_3472	-	response regulator receiver sensor signal transduction histidine kinase
3461	 69.79	-1	3993789..3994844	-	351	86159891	-	Adeh_3473	-	response regulator receiver modulated diguanylate cyclase
3462	 78.32	0	3994891..3995688	+	265	86159892	-	Adeh_3474	-	hypothetical protein
3463	 78.23	0	3995611..3996951	-	446	86159893	-	Adeh_3475	-	hypothetical protein
3464	 75.99	0	3997010..3997567	+	185	86159894	-	Adeh_3476	-	ATP:cob(I)alamin adenosyltransferase
3465	 79.34	+1	3997572..3998273	+	233	86159895	-	Adeh_3477	-	short-chain dehydrogenase/reductase SDR
3466	 67.19	-1	3998393..3998776	+	127	86159896	-	Adeh_3478	-	HesB/YadR/YfhF
3467	 75.80	0	3998862..3999518	+	218	86159897	-	Adeh_3479	-	Beta-lactamase-like
3468	 70.18	0	3999626..4000450	-	274	86159898	-	Adeh_3480	-	enoyl-[acyl-carrier-protein] reductase [NADH]
3469	 71.43	0	4000447..4000782	-	111	86159899	-	Adeh_3481	-	hypothetical protein
3470	 78.28	0	4000845..4001447	+	200	86159900	-	Adeh_3482	-	molybdenum cofactor guanylyltransferase
3471	 74.54	0	4001457..4001837	-	126	86159901	-	Adeh_3483	-	camphor resistance protein CrcB
3472	 78.57	0	4001881..4002258	-	125	86159902	-	Adeh_3484	-	hypothetical protein
3473	 76.30	0	4002349..4002732	+	127	86159903	-	Adeh_3485	-	hypothetical protein
3474	 73.10	0	4002750..4003262	-	170	86159904	-	Adeh_3486	-	hypothetical protein
3475	 78.08	0	4003482..4004243	-	253	86159905	-	Adeh_3487	-	methyltransferase type 11
3476	 76.72	0	4004331..4004678	-	115	86159906	-	Adeh_3488	-	TraR/DksA family transcriptional regulator
3477	 77.81	0	4004793..4005716	-	307	86159907	-	Adeh_3489	-	Pirin-like
3478	 76.80	0	4005799..4008660	+	953	86159908	-	Adeh_3490	-	hypothetical protein
3479	 78.68	0	4008678..4010267	-	529	86159909	-	Adeh_3491	-	hypothetical protein
3480	 74.34	0	4010424..4010879	-	151	86159910	-	Adeh_3492	-	hypothetical protein
3481	 72.12	0	4010893..4012065	-	390	86159911	-	Adeh_3493	-	UBA/THIF-type NAD/FAD binding, MoeZ/MoeB fmaily protein
3482	 73.91	0	4012068..4012343	-	91	86159912	-	Adeh_3494	-	thiamineS
3483	 73.22	0	4012470..4012835	-	121	86159913	-	Adeh_3495	-	hypothetical protein
3484	 76.01	0	4012846..4015263	-	805	86159914	-	Adeh_3496	-	copper-translocating P-type ATPase
3485	 72.01	0	4015260..4015652	-	130	86159915	-	Adeh_3497	-	hypothetical protein
3486	 73.95	0	4015874..4016395	+	173	86159916	-	Adeh_3498	-	hypothetical protein
3487	 77.88	0	4017090..4018373	-	427	86159917	-	Adeh_3499	-	putative sigma factor
3488	 70.27	0	4018402..4018845	-	147	86159918	-	Adeh_3500	-	DGPFAETKE
3489	 73.61	0	4019077..4020084	+	335	86159919	-	Adeh_3501	-	phosphoesterase
3490	 79.22	+1	4020068..4021015	-	315	86159920	-	Adeh_3502	-	esterase/lipase/thioesterase family protein
3491	 75.65	0	4021069..4022292	-	407	86159921	-	Adeh_3503	-	acyltransferase 3
3492	 75.91	0	4022325..4023428	-	367	86159922	-	Adeh_3504	-	phosphatidylinositol alpha-mannosyltransferase
3493	 74.69	0	4023743..4024777	-	344	86159923	-	Adeh_3505	-	aldo/keto reductase
74.55	MEAN

4.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.