IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2722	 78.73	0	3089943..3090995	-	350	86159152	-	Adeh_2730	-	response regulator receiver (CheY-like) modulated CheB methylesterase
2723	 75.00	0	3090992..3091855	-	287	86159153	-	Adeh_2731	-	MCP methyltransferase, CheR-type
2724	 84.71	+2	3091862..3093934	-	690	86159154	-	Adeh_2732	-	HEAT repeat-containing PBS lyase
2725	 79.26	+1	3093931..3094470	-	179	86159155	-	Adeh_2733	-	CheW protein
2726	 79.04	0	3094457..3094933	-	158	86159156	-	Adeh_2734	-	CheW protein
2727	 76.48	0	3095392..3096216	-	274	86159157	-	Adeh_2735	-	general secretion pathway protein-related protein
2728	 75.53	0	3096221..3098284	-	687	86159158	-	Adeh_2736	-	CheA signal transduction histidine kinase
2729	 78.07	0	3098317..3098895	-	192	86159159	-	Adeh_2737	-	hypothetical protein
2730	 71.79	0	3098906..3099334	-	142	86159160	-	Adeh_2738	-	NusB antitermination factor
2731	 75.05	0	3099337..3099825	-	162	86159161	-	Adeh_2739	-	6,7-dimethyl-8-ribityllumazine synthase
2732	 71.88	0	3099822..3101144	-	440	86159162	-	Adeh_2740	-	GTP cyclohydrolase II
2733	 75.46	0	3101141..3101788	-	215	86159163	-	Adeh_2741	-	riboflavin synthase subunit alpha
2734	 79.73	+1	3101801..3102979	-	392	86159164	-	Adeh_2742	-	5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase
2735	 72.61	0	3102976..3103446	-	156	86159165	-	Adeh_2743	-	transcriptional regulator NrdR
2736	 70.65	0	3103513..3104766	-	417	86159166	-	Adeh_2744	-	serine hydroxymethyltransferase
2737	 73.87	0	3104840..3105283	-	147	86159167	-	Adeh_2745	-	ribose-5-phosphate isomerase
2738	 71.42	0	3105315..3106556	-	413	86159168	-	Adeh_2746	-	3-oxoacyl-[acyl-carrier-protein] synthase II
2739	 60.83	-2	3106648..3106887	-	79	86159169	-	Adeh_2747	-	acyl carrier protein
2740	 72.64	0	3106939..3107691	-	250	86159170	-	Adeh_2748	-	3-oxoacyl-[acyl-carrier-protein] reductase
2741	 74.63	0	3107701..3108642	-	313	86159171	-	Adeh_2749	-	[Acyl-carrier-protein] S-malonyltransferase
2742	 70.44	0	3108659..3109639	-	326	86159172	-	Adeh_2750	-	3-oxoacyl-[acyl-carrier-protein] synthase III
2743	 73.39	0	3109647..3110732	-	361	86159173	-	Adeh_2751	-	phosphate:acyl-[acyl carrier protein] acyltransferase
2744	 67.22	-1	3110738..3110917	-	59	86159174	-	Adeh_2752	-	50S ribosomal protein L32P
2745	 69.34	-1	3110957..3111517	-	186	86159175	-	Adeh_2753	-	hypothetical protein
2746	 71.60	0	3111698..3112345	-	215	86159176	-	Adeh_2754	-	two component LuxR family transcriptional regulator
2747	 74.46	0	3112568..3114685	+	705	86159177	-	Adeh_2755	-	hypothetical protein
2748	 69.92	-1	3114788..3115033	-	81	86159178	-	Adeh_2756	-	hypothetical protein
2749	 67.93	-1	3115036..3115749	-	237	86159179	-	Adeh_2757	-	hypothetical protein
2750	 75.00	0	3116062..3116337	+	91	86159180	-	Adeh_2758	-	hypothetical protein
2751	 83.65	+2	3116337..3116648	+	103	86159181	-	Adeh_2759	-	excinuclease ABC subunit C
2752	 78.21	0	3116658..3117428	+	256	86159182	-	Adeh_2760	-	short-chain dehydrogenase/reductase SDR
2753	 78.03	0	3117548..3118744	+	398	86159183	-	Adeh_2761	-	polysaccharide deacetylase
2754	 82.23	+1	3118745..3119791	+	348	86159184	-	Adeh_2762	-	glycosyltransferase-like
2755	 78.46	0	3119886..3121013	+	375	86159185	-	Adeh_2763	-	oxidoreductase-like
2756	 79.07	0	3121010..3122089	+	359	86159186	-	Adeh_2764	-	NAD-dependent epimerase/dehydratase
2757	 76.23	0	3122086..3123225	+	379	86159187	-	Adeh_2765	-	glycosyl transferase, group 1
2758	 70.84	0	3123289..3124701	-	470	86159188	-	Adeh_2766	-	undecaprenyl-phosphate galactosephosphotransferase
2759	 73.93	0	3125224..3125856	+	210	86159189	-	Adeh_2767	-	polysaccharide export protein
2760	 79.05	0	3125859..3127142	+	427	86159190	-	Adeh_2768	-	hypothetical protein
2761	 77.24	0	3127153..3128022	-	289	86159191	-	Adeh_2769	-	WecB/TagA/CpsF family glycosyl transferase
2762	 75.05	0	3128674..3130056	-	460	86159192	-	Adeh_2770	-	polysaccharide biosynthesis protein
2763	 71.96	0	3130083..3131216	-	377	86159193	-	Adeh_2771	-	UDP-N-acetylglucosamine 2-epimerase
2764	 73.78	0	3131322..3132713	+	463	86159194	-	Adeh_2772	-	glycosyl transferase, group 1
2765	 74.01	0	3132789..3136136	-	1115	86159195	-	Adeh_2773	-	fibronectin, type III
2766	 70.66	0	3136561..3138636	-	691	86159196	-	Adeh_2774	-	hypothetical protein
2767	 70.27	0	3138762..3139760	-	332	86159197	-	Adeh_2775	-	glycosyl transferase family protein
2768	 73.60	0	3139858..3141372	-	504	86159198	-	Adeh_2776	-	hypothetical protein
2769	 68.54	-1	3141412..3141624	-	70	86159199	-	Adeh_2777	-	hypothetical protein
2770	 72.44	0	3141656..3143491	-	611	86159200	-	Adeh_2778	-	hypothetical protein
2771	 77.38	0	3143557..3145377	+	606	86159201	-	Adeh_2779	-	glycoside hydrolase family protein
2772	 75.48	0	3145382..3147322	-	646	86159202	-	Adeh_2780	-	asparagine synthase, glutamine-hydrolyzing
2773	 73.38	0	3147410..3148660	-	416	86159203	-	Adeh_2781	-	hypothetical protein
2774	 73.62	0	3148788..3149621	+	277	86159204	-	Adeh_2782	-	hypothetical protein
2775	 70.48	0	3149809..3151119	-	436	86159205	-	Adeh_2783	-	membrane bound O-acyl transferase, MBOAT
2776	 72.94	0	3151250..3152779	-	509	86159206	-	Adeh_2784	-	exopolysaccharide biosynthesis protein
2777	 75.58	0	3152900..3154504	+	534	86159207	-	Adeh_2785	-	AMP-dependent synthetase and ligase
2778	 74.41	0	3154578..3155972	+	464	86159208	-	Adeh_2786	-	PKD
2779	 70.71	0	3156079..3157191	-	370	86159209	-	Adeh_2787	-	LigA
2780	 70.78	0	3157369..3158340	+	323	86159210	nadE	Adeh_2788	-	NAD synthetase
2781	 75.31	0	3158340..3160352	+	670	86159211	-	Adeh_2789	-	asparagine synthase, glutamine-hydrolyzing
2782	 65.49	-1	3160372..3160626	+	84	86159212	-	Adeh_2790	-	hypothetical protein
2783	 69.05	-1	3160710..3163736	-	1008	86159213	-	Adeh_2791	-	trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein
2784	 76.59	0	3164002..3164535	+	177	86159214	-	Adeh_2792	-	hypothetical protein
2785	 82.01	+1	3164591..3165574	-	327	86159215	-	Adeh_2793	-	hypothetical protein
2786	 78.67	0	3165642..3166724	+	360	86159216	-	Adeh_2794	-	rhomboid-like protein
2787	 76.19	0	3167147..3167713	+	188	86159217	-	Adeh_2795	-	sigma-24 (FecI-like)
2788	 79.59	+1	3167762..3170710	+	982	86159218	-	Adeh_2796	-	serine/threonine protein kinase
2789	 76.62	0	3170790..3171743	+	317	86159219	-	Adeh_2797	-	zinc-binding alcohol dehydrogenase
2790	 76.57	0	3171765..3172178	-	137	86159220	-	Adeh_2798	-	glyoxalase/bleomycin resistance protein/dioxygenase
2791	 80.68	+1	3172391..3172918	+	175	86159221	-	Adeh_2799	-	hypothetical protein
2792	 76.67	0	3172915..3174504	-	529	86159222	phhA	Adeh_2800	-	phenylalanine 4-monooxygenase
2793	 80.95	+1	3174649..3176139	-	496	86159223	-	Adeh_2801	-	ABC transporter, ATPase subunit
2794	 75.24	0	3176314..3176523	-	69	86159224	-	Adeh_2802	-	hypothetical protein
2795	 73.33	0	3176645..3177004	+	119	86159225	-	Adeh_2803	-	response regulator receiver domain-containing protein
2796	 77.24	0	3177118..3177363	+	81	86159226	-	Adeh_2804	-	hypothetical protein
2797	 76.38	0	3177356..3180568	+	1070	86159227	-	Adeh_2805	-	multi-sensor signal transduction histidine kinase
2798	 76.27	0	3180620..3182368	-	582	86159228	-	Adeh_2806	-	HNH endonuclease
2799	 60.62	-2	3182618..3183097	+	159	86159229	-	Adeh_2807	-	hypothetical protein
2800	 66.15	-1	3183260..3183643	+	127	86159230	-	Adeh_2808	-	hypothetical protein
2801	 70.40	0	3184015..3184362	-	115	86159231	-	Adeh_2809	-	hypothetical protein
2802	 66.67	-1	3184461..3185303	+	280	86159232	-	Adeh_2810	-	integrase
2803	 68.09	-1	3185533..3186165	+	210	86159233	-	Adeh_2811	-	hypothetical protein
2804	 69.74	-1	3186165..3186587	+	140	86159234	-	Adeh_2812	-	hypothetical protein
2805	 66.73	-1	3187104..3188645	-	513	86159235	-	Adeh_2813	-	YD repeat-containing protein
2806	 73.17	0	3188815..3190029	-	404	86159236	-	Adeh_2814	-	hypothetical protein
2807	 78.38	0	3190722..3192095	+	457	86159237	-	Adeh_2815	-	cytochrome c like protein
2808	 75.91	0	3192278..3194245	+	655	86159238	-	Adeh_2816	-	cytochrome c like protein
2809	 71.52	0	3194396..3195157	+	253	86159239	-	Adeh_2817	-	hypothetical protein
2810	 73.31	0	3195218..3196105	+	295	86159240	-	Adeh_2818	-	short-chain dehydrogenase/reductase SDR
2811	 79.34	+1	3196120..3198384	-	754	86159241	-	Adeh_2819	-	oligosaccharyl transferase, STT3 subunit
2812	 72.84	0	3198401..3199486	-	361	86159242	-	Adeh_2820	-	hypothetical protein
2813	 77.14	0	3199496..3199810	-	104	86159243	-	Adeh_2821	-	hypothetical protein
2814	 76.74	0	3199812..3200585	-	257	86159244	-	Adeh_2822	-	TPR repeat-containing protein
2815	 76.11	0	3200582..3201502	-	306	86159245	-	Adeh_2823	-	type II secretion system protein
2816	 74.14	0	3201514..3202476	-	320	86159246	-	Adeh_2824	-	type II secretion system protein
2817	 71.77	0	3202469..3203821	-	450	86159247	-	Adeh_2825	-	type II secretion system protein E
2818	 75.04	0	3203825..3204958	-	377	86159248	-	Adeh_2826	-	Flp pilus assembly protein ATPase CpaE-like
2819	 71.65	0	3204990..3206453	-	487	86159249	-	Adeh_2827	-	type II and III secretion system protein
2820	 72.73	0	3206450..3207373	-	307	86159250	-	Adeh_2828	-	Flp pilus assembly CpaB
2821	 72.99	0	3207391..3207801	-	136	86159251	-	Adeh_2829	-	TadE-like
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.