IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2297	 72.31	0	2603489..2605651	-	720	86158727	-	Adeh_2305	-	dehydrogenase-like
2298	 74.56	0	2605881..2606741	+	286	86158728	-	Adeh_2306	-	short-chain dehydrogenase/reductase SDR
2299	 75.50	0	2606809..2607555	-	248	86158729	-	Adeh_2307	-	glycine cleavage H-protein
2300	 69.80	-1	2608094..2608348	+	84	86158730	-	Adeh_2308	-	hypothetical protein
2301	 75.25	0	2608544..2609254	+	236	86158731	-	Adeh_2309	-	short-chain dehydrogenase/reductase SDR
2302	 74.79	0	2609297..2609998	-	233	86158732	-	Adeh_2310	-	hypothetical protein
2303	 73.62	0	2610023..2610727	-	234	86158733	-	Adeh_2311	-	molybdopterin-binding oxidoreductase
2304	 71.76	0	2610724..2611332	-	202	86158734	-	Adeh_2312	-	hypothetical protein
2305	 76.75	0	2611608..2612708	+	366	86158735	-	Adeh_2313	-	hypothetical protein
2306	 68.99	-1	2613108..2613494	+	128	86158736	-	Adeh_2314	-	hypothetical protein
2307	 71.45	0	2613531..2614700	-	389	86158737	-	Adeh_2315	-	aminotransferase
2308	 69.71	-1	2614713..2615762	-	349	86158738	-	Adeh_2316	-	cysteine synthase
2309	 71.67	0	2616035..2617252	+	405	86158739	-	Adeh_2317	-	hypothetical protein
2310	 74.37	0	2617388..2619022	+	544	86158740	-	Adeh_2318	-	YidE/YbjL like transporter
2311	 61.54	-2	2619127..2619945	-	272	86158741	-	Adeh_2319	-	hypothetical protein
2312	 56.47	-2	2619942..2620559	-	205	86158742	-	Adeh_2320	-	hypothetical protein
2313	 61.08	-2	2620639..2621211	-	190	86158743	-	Adeh_2321	-	hypothetical protein
2314	 58.99	-2	2621431..2621847	-	138	86158744	-	Adeh_2322	-	hypothetical protein
2315	 64.66	-2	2621879..2623027	-	382	86158745	-	Adeh_2323	-	hypothetical protein
2316	 75.00	0	2623064..2623819	-	251	86158746	-	Adeh_2324	-	hypothetical protein
2317	 66.93	-1	2624157..2624537	-	126	86158747	-	Adeh_2325	-	hypothetical protein
2318	 64.56	-2	2624551..2624835	-	94	86158748	-	Adeh_2326	-	hypothetical protein
2319	 62.27	-2	2624845..2627985	-	1046	86158749	-	Adeh_2327	-	HsdR family type I site-specific deoxyribonuclease
2320	 61.48	-2	2627991..2629205	-	404	86158750	-	Adeh_2328	-	type I restriction-modification system specificity subunit
2321	 61.22	-2	2629212..2630828	-	538	86158751	-	Adeh_2329	-	N-6 DNA methylase
2322	 59.91	-2	2630936..2631778	-	280	86158752	-	Adeh_2330	-	hypothetical protein
2323	 69.40	-1	2632374..2632994	-	206	86158753	-	Adeh_2331	-	resolvase-like protein
2324	 74.79	0	2634363..2635187	+	274	86158754	-	Adeh_2332	-	mucin-associated surface protein (MASP), putative
2325	 73.90	0	2635187..2635711	+	174	86158755	-	Adeh_2333	-	hypothetical protein
2326	 70.11	0	2635708..2636085	+	125	86158756	-	Adeh_2334	-	hypothetical protein
2327	 71.26	0	2636078..2636338	+	86	86158757	-	Adeh_2335	-	hypothetical protein
2328	 71.61	0	2636757..2638355	+	532	86158758	-	Adeh_2336	-	recombinase
2329	 75.21	0	2638521..2639363	-	280	86158759	-	Adeh_2337	-	ABCMn2+/Zn2+ transporter, inner membrane subunit
2330	 76.13	0	2639360..2640130	-	256	86158760	-	Adeh_2338	-	ABC transporter, ATPase subunit
2331	 74.67	0	2640127..2641026	-	299	86158761	-	Adeh_2339	-	ABC metal ion transporter, periplasmic solute binding protein
2332	 76.48	0	2641040..2642272	-	410	86158762	-	Adeh_2340	-	hypothetical protein
2333	 78.79	0	2642365..2642628	-	87	86158763	-	Adeh_2341	-	hypothetical protein
2334	 79.51	+1	2642707..2643882	-	391	86158764	-	Adeh_2342	-	Alpha-methylacyl-CoA racemase
2335	 66.07	-1	2643898..2644230	-	110	86158765	-	Adeh_2343	-	putative sterol carrier protein
2336	 73.28	0	2644340..2644747	-	135	86158766	-	Adeh_2344	-	response regulator receiver domain-containing protein
2337	 70.03	0	2644816..2646630	-	604	86158767	-	Adeh_2345	-	AMP-dependent synthetase and ligase
2338	 72.24	0	2646644..2647378	-	244	86158768	-	Adeh_2346	-	TPR repeat-containing protein
2339	 72.61	0	2647576..2649510	-	644	86158769	-	Adeh_2347	-	hypothetical protein
2340	 72.32	0	2649668..2651224	-	518	86158770	guaA	Adeh_2348	-	bifunctional GMP synthase/glutamine amidotransferase protein
2341	 69.60	-1	2651279..2652742	-	487	86158771	-	Adeh_2349	-	inosine-5'-monophosphate dehydrogenase
2342	 76.12	0	2652934..2655282	+	782	86158772	-	Adeh_2350	-	DnaK family protein
2343	 70.81	0	2655330..2656004	-	224	86158773	-	Adeh_2351	-	hypothetical protein
2344	 74.19	0	2656120..2656584	-	154	86158774	-	Adeh_2352	-	cyclic nucleotide-binding protein
2345	 75.00	0	2656581..2657108	-	175	86158775	-	Adeh_2353	-	hexapaptide repeat-containing transferase
2346	 78.14	0	2657122..2657487	-	121	86158776	-	Adeh_2354	-	hypothetical protein
2347	 74.62	0	2657550..2658944	-	464	86158777	-	Adeh_2355	-	tRNA-i(6)A37 modification enzyme MiaB
2348	 77.87	0	2659022..2660422	-	466	86158778	-	Adeh_2356	-	VWA containing CoxE-like
2349	 74.11	0	2660527..2661762	+	411	86158779	-	Adeh_2357	-	Ste24 endopeptidase
2350	 82.75	+1	2661793..2662998	-	401	86158780	-	Adeh_2358	-	TonB-like protein
2351	 77.22	0	2663142..2664932	-	596	86158781	-	Adeh_2359	-	long-chain-fatty-acid--CoA ligase
2352	 79.73	+1	2665038..2666354	-	438	86158782	-	Adeh_2360	-	(Uracil-5)-methyltransferase
2353	 69.19	-1	2666394..2666750	-	118	86158783	-	Adeh_2361	-	hypothetical protein
2354	 79.55	+1	2666765..2667556	-	263	86158784	-	Adeh_2362	-	hypothetical protein
2355	 70.15	0	2667595..2668254	-	219	86158785	-	Adeh_2363	-	butyryl-CoA:acetate CoA transferase
2356	 70.66	0	2668269..2668970	-	233	86158786	-	Adeh_2364	-	3-oxoacid CoA-transferase, subunit A
2357	 73.69	0	2668980..2670161	-	393	86158787	-	Adeh_2365	-	Acetyl-CoA C-acetyltransferase
2358	 79.84	+1	2670408..2671310	+	300	86158788	-	Adeh_2366	-	peptidase T2, asparaginase 2
2359	 77.73	0	2671336..2672031	-	231	86158789	-	Adeh_2367	-	hypothetical protein
2360	 68.97	-1	2672154..2672933	-	259	86158790	-	Adeh_2368	-	SPFH domain-containing protein/band 7 family protein
2361	 77.45	0	2672989..2674407	-	472	86158791	-	Adeh_2369	-	nodulation efficiency protein NfeD
2362	 73.85	0	2674410..2675147	-	245	86158792	-	Adeh_2370	-	phage SPO1 DNA polymerase-related protein
2363	 71.53	0	2675329..2676273	+	314	86158793	-	Adeh_2371	-	hypothetical protein
2364	 75.70	0	2676368..2677585	-	405	86158794	-	Adeh_2372	-	phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase
2365	 79.17	+1	2677660..2678739	+	359	86158795	-	Adeh_2373	-	abortive infection protein
2366	 76.37	0	2678817..2679362	+	181	86158796	-	Adeh_2374	-	hypothetical protein
2367	 77.12	0	2679385..2679996	+	203	86158797	-	Adeh_2375	-	hypothetical protein
2368	 75.56	0	2680039..2681241	-	400	86158798	-	Adeh_2376	-	SAM-dependent methyltransferase
2369	 77.78	0	2681238..2682578	-	446	86158799	-	Adeh_2377	-	radical SAM family protein
2370	 65.74	-1	2682884..2683528	+	214	86158800	-	Adeh_2378	-	sigma-24 (FecI-like)
2371	 76.59	0	2683551..2684366	+	271	86158801	-	Adeh_2379	-	putative transmembrane transcriptional regulator (anti-sigma factor)
2372	 78.13	0	2684533..2686119	+	528	86158802	-	Adeh_2380	-	response regulator receiver domain-containing protein
2373	 74.92	0	2686135..2686437	-	100	86158803	-	Adeh_2381	-	hypothetical protein
2374	 79.67	+1	2686603..2686971	-	122	86158804	-	Adeh_2382	-	hypothetical protein
2375	 73.33	0	2686983..2687207	-	74	86158805	-	Adeh_2383	-	hypothetical protein
2376	 76.62	0	2687289..2688896	-	535	86158806	-	Adeh_2384	-	integral membrane protein MviN
2377	 71.64	0	2688896..2690041	-	381	86158807	-	Adeh_2385	-	hypothetical protein
2378	 79.74	+1	2690041..2690820	-	259	86158808	-	Adeh_2386	-	TPR repeat-containing protein
2379	 70.85	0	2690817..2691581	-	254	86158809	-	Adeh_2387	-	pantothenate kinase
2380	 76.33	0	2691655..2692647	-	330	86158810	-	Adeh_2388	-	biotin--acetyl-CoA-carboxylase ligase
2381	 77.30	0	2692700..2693536	-	278	86158811	-	Adeh_2389	-	nicotinate-nucleotide pyrophosphorylase [carboxylating]
2382	 70.05	0	2693551..2696709	-	1052	86158812	-	Adeh_2390	-	valyl-tRNA synthetase
2383	 81.63	+1	2696807..2698216	-	469	86158813	-	Adeh_2391	-	response regulator receiver domain-containing protein
2384	 79.05	0	2698352..2699005	-	217	86158814	-	Adeh_2392	-	CheW-like protein
2385	 73.10	0	2699145..2700512	+	455	86158815	-	Adeh_2393	-	response regulator receiver modulated diguanylate cyclase
2386	 69.10	-1	2700769..2702415	-	548	86158816	groEL	Adeh_2394	-	chaperonin GroEL
2387	 76.27	0	2702675..2703736	+	353	86158817	-	Adeh_2395	-	TPR repeat-containing protein
2388	 73.85	0	2703787..2704788	-	333	86158818	-	Adeh_2396	-	patatin
2389	 77.70	0	2704825..2705667	-	280	86158819	-	Adeh_2397	-	hypothetical protein
2390	 77.78	0	2705664..2706131	-	155	86158820	-	Adeh_2398	-	hypothetical protein
2391	 78.89	0	2706128..2707027	-	299	86158821	-	Adeh_2399	-	ABC transporter, ATPase subunit
2392	 75.87	0	2707024..2708403	-	459	86158822	-	Adeh_2400	-	periplasmic copper-binding, NosD
2393	 70.47	0	2708408..2709064	-	218	86158823	-	Adeh_2401	-	hypothetical protein
2394	 67.36	-1	2709096..2710958	-	620	86158824	-	Adeh_2402	-	nitrous-oxide reductase
2395	 71.79	0	2710982..2712268	-	428	86158825	-	Adeh_2403	-	hypothetical protein
2396	 72.20	0	2712271..2713626	-	451	86158826	-	Adeh_2404	-	cytochrome b/b6-like
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.