IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2255	 78.93	0	2562266..2563105	+	279	86158685	-	Adeh_2263	-	PEP phosphonomutase
2256	 73.42	0	2563226..2563462	+	78	86158686	-	Adeh_2264	-	hypothetical protein
2257	 75.89	0	2563520..2563942	-	140	86158687	-	Adeh_2265	-	OsmC-like protein
2258	 79.85	+1	2564068..2565531	-	487	86158688	-	Adeh_2266	-	hypothetical protein
2259	 79.00	0	2565645..2566649	-	334	86158689	-	Adeh_2267	-	AraC family transcriptional regulator
2260	 77.00	0	2566809..2567669	+	286	86158690	-	Adeh_2268	-	methyltransferase type 11
2261	 78.54	0	2567878..2568399	+	173	86158691	-	Adeh_2269	-	hypothetical protein
2262	 75.64	0	2568544..2569524	+	326	86158692	-	Adeh_2270	-	2-dehydropantoate 2-reductase
2263	 74.47	0	2569561..2570892	-	443	86158693	-	Adeh_2271	-	hypothetical protein
2264	 72.56	0	2570990..2571379	-	129	86158694	-	Adeh_2272	-	Caa(3)-type oxidase, subunit IV
2265	 69.35	-1	2571390..2572097	-	235	86158695	-	Adeh_2273	-	cytochrome c oxidase, subunit III
2266	 68.35	-1	2572098..2573762	-	554	86158696	-	Adeh_2274	-	cytochrome-c oxidase
2267	 71.30	0	2573759..2574772	-	337	86158697	-	Adeh_2275	-	cytochrome c oxidase, subunit II
2268	 75.21	0	2574769..2575599	-	276	86158698	-	Adeh_2276	-	uncharacterized protein SCO1/SenC/PrrC-like
2269	 73.64	0	2575627..2576013	-	128	86158699	-	Adeh_2277	-	cytochrome c, class I
2270	 76.38	0	2576072..2577028	-	318	86158700	-	Adeh_2278	-	Beta-lactamase-like
2271	 73.25	0	2577028..2578743	-	571	86158701	-	Adeh_2279	-	sulfate thiol esterase SoxB
2272	 71.72	0	2578762..2579394	-	210	86158702	-	Adeh_2280	-	hypothetical protein
2273	 73.41	0	2579405..2580220	-	271	86158703	-	Adeh_2281	-	hypothetical protein
2274	 69.88	-1	2580253..2580594	-	113	86158704	-	Adeh_2282	-	hypothetical protein
2275	 66.67	-1	2580747..2581058	-	103	86158705	-	Adeh_2283	-	sulfur compound chelating protein SoxZ
2276	 70.35	0	2581076..2581564	-	162	86158706	-	Adeh_2284	-	hypothetical protein
2277	 76.46	0	2581623..2582663	-	346	86158707	-	Adeh_2285	-	cytochrome c, class I
2278	 72.12	0	2582647..2584002	-	451	86158708	-	Adeh_2286	-	molybdopterin-binding oxidoreductase
2279	 80.16	+1	2584192..2584443	-	83	86158709	-	Adeh_2287	-	hypothetical protein
2280	 76.95	0	2584576..2585100	+	174	86158710	-	Adeh_2288	-	hypothetical protein
2281	 74.94	0	2585105..2585962	-	285	86158711	-	Adeh_2289	-	ErfK/YbiS/YcfS/YnhG like protein
2282	 75.79	0	2586006..2586641	-	211	86158712	-	Adeh_2290	-	hypothetical protein
2283	 78.16	0	2586697..2588001	-	434	86158713	-	Adeh_2291	-	hypothetical protein
2284	 67.39	-1	2588015..2590099	-	694	86158714	-	Adeh_2292	-	elongation factor G
2285	 76.26	0	2590765..2591733	-	322	86158715	-	Adeh_2293	-	hypothetical protein
2286	 70.37	0	2591810..2592268	-	152	86158716	-	Adeh_2294	-	Aha1 domain-containing protein
2287	 75.48	0	2592451..2593698	-	415	86158717	-	Adeh_2295	-	Beta-lactamase
2288	 69.63	-1	2593984..2594523	+	179	86158718	-	Adeh_2296	-	hypothetical protein
2289	 73.19	0	2594763..2595605	+	280	86158719	-	Adeh_2297	-	hypothetical protein
2290	 76.28	0	2595602..2596225	-	207	86158720	-	Adeh_2298	-	TetR family transcriptional regulator
2291	 73.05	0	2596282..2597205	+	307	86158721	-	Adeh_2299	-	NAD-dependent epimerase/dehydratase
2292	 75.00	0	2597278..2598537	-	419	86158722	-	Adeh_2300	-	hypothetical protein
2293	 71.53	0	2598747..2599445	+	232	86158723	-	Adeh_2301	-	Poly(3-hydroxybutyrate) depolymerase-like
2294	 68.92	-1	2599512..2599733	-	73	86158724	-	Adeh_2302	-	hypothetical protein
2295	 68.36	-1	2600086..2601030	+	314	86158725	-	Adeh_2303	-	integral membrane protein TerC
2296	 74.50	0	2601148..2603559	+	803	86158726	-	Adeh_2304	-	molybdopterin oxidoreductase
2297	 72.31	0	2603489..2605651	-	720	86158727	-	Adeh_2305	-	dehydrogenase-like
2298	 74.56	0	2605881..2606741	+	286	86158728	-	Adeh_2306	-	short-chain dehydrogenase/reductase SDR
2299	 75.50	0	2606809..2607555	-	248	86158729	-	Adeh_2307	-	glycine cleavage H-protein
2300	 69.80	-1	2608094..2608348	+	84	86158730	-	Adeh_2308	-	hypothetical protein
2301	 75.25	0	2608544..2609254	+	236	86158731	-	Adeh_2309	-	short-chain dehydrogenase/reductase SDR
2302	 74.79	0	2609297..2609998	-	233	86158732	-	Adeh_2310	-	hypothetical protein
2303	 73.62	0	2610023..2610727	-	234	86158733	-	Adeh_2311	-	molybdopterin-binding oxidoreductase
2304	 71.76	0	2610724..2611332	-	202	86158734	-	Adeh_2312	-	hypothetical protein
2305	 76.75	0	2611608..2612708	+	366	86158735	-	Adeh_2313	-	hypothetical protein
2306	 68.99	-1	2613108..2613494	+	128	86158736	-	Adeh_2314	-	hypothetical protein
2307	 71.45	0	2613531..2614700	-	389	86158737	-	Adeh_2315	-	aminotransferase
2308	 69.71	-1	2614713..2615762	-	349	86158738	-	Adeh_2316	-	cysteine synthase
2309	 71.67	0	2616035..2617252	+	405	86158739	-	Adeh_2317	-	hypothetical protein
2310	 74.37	0	2617388..2619022	+	544	86158740	-	Adeh_2318	-	YidE/YbjL like transporter
2311	 61.54	-2	2619127..2619945	-	272	86158741	-	Adeh_2319	-	hypothetical protein
2312	 56.47	-2	2619942..2620559	-	205	86158742	-	Adeh_2320	-	hypothetical protein
2313	 61.08	-2	2620639..2621211	-	190	86158743	-	Adeh_2321	-	hypothetical protein
2314	 58.99	-2	2621431..2621847	-	138	86158744	-	Adeh_2322	-	hypothetical protein
2315	 64.66	-2	2621879..2623027	-	382	86158745	-	Adeh_2323	-	hypothetical protein
2316	 75.00	0	2623064..2623819	-	251	86158746	-	Adeh_2324	-	hypothetical protein
2317	 66.93	-1	2624157..2624537	-	126	86158747	-	Adeh_2325	-	hypothetical protein
2318	 64.56	-2	2624551..2624835	-	94	86158748	-	Adeh_2326	-	hypothetical protein
2319	 62.27	-2	2624845..2627985	-	1046	86158749	-	Adeh_2327	-	HsdR family type I site-specific deoxyribonuclease
2320	 61.48	-2	2627991..2629205	-	404	86158750	-	Adeh_2328	-	type I restriction-modification system specificity subunit
2321	 61.22	-2	2629212..2630828	-	538	86158751	-	Adeh_2329	-	N-6 DNA methylase
2322	 59.91	-2	2630936..2631778	-	280	86158752	-	Adeh_2330	-	hypothetical protein
2323	 69.40	-1	2632374..2632994	-	206	86158753	-	Adeh_2331	-	resolvase-like protein
2324	 74.79	0	2634363..2635187	+	274	86158754	-	Adeh_2332	-	mucin-associated surface protein (MASP), putative
2325	 73.90	0	2635187..2635711	+	174	86158755	-	Adeh_2333	-	hypothetical protein
2326	 70.11	0	2635708..2636085	+	125	86158756	-	Adeh_2334	-	hypothetical protein
2327	 71.26	0	2636078..2636338	+	86	86158757	-	Adeh_2335	-	hypothetical protein
2328	 71.61	0	2636757..2638355	+	532	86158758	-	Adeh_2336	-	recombinase
2329	 75.21	0	2638521..2639363	-	280	86158759	-	Adeh_2337	-	ABCMn2+/Zn2+ transporter, inner membrane subunit
2330	 76.13	0	2639360..2640130	-	256	86158760	-	Adeh_2338	-	ABC transporter, ATPase subunit
2331	 74.67	0	2640127..2641026	-	299	86158761	-	Adeh_2339	-	ABC metal ion transporter, periplasmic solute binding protein
2332	 76.48	0	2641040..2642272	-	410	86158762	-	Adeh_2340	-	hypothetical protein
2333	 78.79	0	2642365..2642628	-	87	86158763	-	Adeh_2341	-	hypothetical protein
2334	 79.51	+1	2642707..2643882	-	391	86158764	-	Adeh_2342	-	Alpha-methylacyl-CoA racemase
2335	 66.07	-1	2643898..2644230	-	110	86158765	-	Adeh_2343	-	putative sterol carrier protein
2336	 73.28	0	2644340..2644747	-	135	86158766	-	Adeh_2344	-	response regulator receiver domain-containing protein
2337	 70.03	0	2644816..2646630	-	604	86158767	-	Adeh_2345	-	AMP-dependent synthetase and ligase
2338	 72.24	0	2646644..2647378	-	244	86158768	-	Adeh_2346	-	TPR repeat-containing protein
2339	 72.61	0	2647576..2649510	-	644	86158769	-	Adeh_2347	-	hypothetical protein
2340	 72.32	0	2649668..2651224	-	518	86158770	guaA	Adeh_2348	-	bifunctional GMP synthase/glutamine amidotransferase protein
2341	 69.60	-1	2651279..2652742	-	487	86158771	-	Adeh_2349	-	inosine-5'-monophosphate dehydrogenase
2342	 76.12	0	2652934..2655282	+	782	86158772	-	Adeh_2350	-	DnaK family protein
2343	 70.81	0	2655330..2656004	-	224	86158773	-	Adeh_2351	-	hypothetical protein
2344	 74.19	0	2656120..2656584	-	154	86158774	-	Adeh_2352	-	cyclic nucleotide-binding protein
2345	 75.00	0	2656581..2657108	-	175	86158775	-	Adeh_2353	-	hexapaptide repeat-containing transferase
2346	 78.14	0	2657122..2657487	-	121	86158776	-	Adeh_2354	-	hypothetical protein
2347	 74.62	0	2657550..2658944	-	464	86158777	-	Adeh_2355	-	tRNA-i(6)A37 modification enzyme MiaB
2348	 77.87	0	2659022..2660422	-	466	86158778	-	Adeh_2356	-	VWA containing CoxE-like
2349	 74.11	0	2660527..2661762	+	411	86158779	-	Adeh_2357	-	Ste24 endopeptidase
2350	 82.75	+1	2661793..2662998	-	401	86158780	-	Adeh_2358	-	TonB-like protein
2351	 77.22	0	2663142..2664932	-	596	86158781	-	Adeh_2359	-	long-chain-fatty-acid--CoA ligase
2352	 79.73	+1	2665038..2666354	-	438	86158782	-	Adeh_2360	-	(Uracil-5)-methyltransferase
2353	 69.19	-1	2666394..2666750	-	118	86158783	-	Adeh_2361	-	hypothetical protein
2354	 79.55	+1	2666765..2667556	-	263	86158784	-	Adeh_2362	-	hypothetical protein
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.