IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2147	 75.67	0	2431727..2432137	-	136	86158577	-	Adeh_2155	-	hypothetical protein
2148	 75.64	0	2432115..2432894	-	259	86158578	-	Adeh_2156	-	hypothetical protein
2149	 72.01	0	2432978..2434624	+	548	86158579	-	Adeh_2157	-	ABC transporter, duplicated ATPase subunits
2150	 75.00	0	2434915..2435370	-	151	86158580	-	Adeh_2158	-	thioesterase, putative
2151	 74.23	0	2435461..2436399	+	312	86158581	-	Adeh_2159	-	2-dehydropantoate 2-reductase
2152	 72.76	0	2436396..2437625	+	409	86158582	-	Adeh_2160	-	hypothetical protein
2153	 72.30	0	2437729..2438616	+	295	86158583	-	Adeh_2161	-	hypothetical protein
2154	 76.00	0	2438650..2439495	-	281	86158584	-	Adeh_2162	-	methyltransferase
2155	 77.29	0	2439553..2439966	+	137	86158585	-	Adeh_2163	-	hypothetical protein
2156	 71.43	0	2439992..2440222	-	76	86158586	-	Adeh_2164	-	hypothetical protein
2157	 70.98	0	2440491..2440907	+	138	86158587	-	Adeh_2165	-	hypothetical protein
2158	 74.76	0	2440947..2441564	+	205	86158588	-	Adeh_2166	-	phospholipid/glycerol acyltransferase
2159	 76.14	0	2441567..2442115	-	182	86158589	-	Adeh_2167	-	hemerythrin HHE cation binding protein
2160	 69.20	-1	2442118..2442552	-	144	86158590	-	Adeh_2168	-	putative PAS/PAC sensor protein
2161	 79.26	+1	2442930..2443739	+	269	86158591	-	Adeh_2169	-	hypothetical protein
2162	 72.43	0	2443736..2447359	+	1207	86158592	-	Adeh_2170	-	nitrate oxidoreductase alpha subunit
2163	 72.45	0	2447383..2448852	+	489	86158593	-	Adeh_2171	-	respiratory nitrate reductase beta subunit
2164	 78.87	0	2448857..2449405	+	182	86158594	-	Adeh_2172	-	respiratory nitrate reductase chaperone NarJ
2165	 75.97	0	2449402..2450100	+	232	86158595	-	Adeh_2173	-	respiratory nitrate reductase gamma subunit
2166	 73.95	0	2450104..2451531	+	475	86158596	-	Adeh_2174	-	nitrate transporter
2167	 78.90	0	2451572..2452429	-	285	86158597	-	Adeh_2175	-	hypothetical protein
2168	 73.16	0	2452480..2453310	-	276	86158598	-	Adeh_2176	-	hypothetical protein
2169	 79.22	+1	2453961..2454677	-	238	86158599	-	Adeh_2177	-	hypothetical protein
2170	 78.81	0	2454863..2455636	-	257	86158600	-	Adeh_2178	-	hypothetical protein
2171	 68.21	-1	2455942..2457174	+	410	86158601	-	Adeh_2179	-	ABC branched-chain amino acid transporter, periplasmic ligand binding protein
2172	 70.74	0	2457301..2458134	+	277	86158602	-	Adeh_2180	-	ABC branched-chain amino acid transporter, inner membrane subunit
2173	 73.81	0	2458149..2460107	+	652	86158603	-	Adeh_2181	-	ABC branched-chain amino acid transporter, fused ATPase and inner-membrane subunits
2174	 73.78	0	2460120..2460836	+	238	86158604	-	Adeh_2182	-	ABC branched-chain amino acid transporter, ATPase subunit
2175	 78.31	0	2460833..2461777	+	314	86158605	-	Adeh_2183	-	hypothetical protein
2176	 67.91	-1	2461942..2462664	+	240	86158606	-	Adeh_2184	-	hypothetical protein
2177	 76.36	0	2462674..2462931	-	85	86158607	-	Adeh_2185	-	hypothetical protein
2178	 75.90	0	2463074..2463658	-	194	86158608	-	Adeh_2186	-	CheW protein
2179	 72.98	0	2463668..2465329	-	553	86158609	-	Adeh_2187	-	methyl-accepting chemotaxis sensory transducer
2180	 71.67	0	2465417..2466556	-	379	86158610	-	Adeh_2188	-	acetamidase/formamidase
2181	 80.94	+1	2467062..2467916	-	284	86158611	-	Adeh_2189	-	MaoC-like dehydratase
2182	 76.57	0	2468196..2468801	+	201	86158612	-	Adeh_2190	-	hypothetical protein
2183	 79.73	+1	2468830..2469954	-	374	86158613	-	Adeh_2191	-	LuxR family transcriptional regulator
2184	 74.52	0	2470160..2470630	+	156	86158614	-	Adeh_2192	-	hypothetical protein
2185	 68.46	-1	2470638..2471138	-	166	86158615	-	Adeh_2193	-	rubrerythrin
2186	 72.04	0	2471189..2473438	-	749	86158616	-	Adeh_2194	-	cytochrome c assembly protein
2187	 80.39	+1	2473649..2474887	-	412	86158617	-	Adeh_2195	-	protein of unknown function RIO1
2188	 82.51	+1	2474895..2475683	-	262	86158618	-	Adeh_2196	-	translation initiation factor 2
2189	 75.86	0	2475730..2476632	-	300	86158619	-	Adeh_2197	-	LysR family transcriptional regulator
2190	 74.74	0	2476793..2477275	+	160	86158620	-	Adeh_2198	-	signal-transduction protein
2191	 76.60	0	2477286..2478905	-	539	86158621	-	Adeh_2199	-	oxidoreductase
2192	 75.89	0	2479296..2481842	-	848	86158622	-	Adeh_2200	-	PAS/PAC sensor hybrid histidine kinase
2193	 75.76	0	2482006..2482335	-	109	86158623	-	Adeh_2201	-	thioredoxin
2194	 81.07	+1	2482391..2483404	-	337	86158624	-	Adeh_2202	-	LysR family transcriptional regulator
2195	 77.78	0	2483421..2484356	-	311	86158625	-	Adeh_2203	-	hypothetical protein
2196	 74.44	0	2484576..2486480	-	634	86158626	-	Adeh_2204	-	PKD
2197	 72.94	0	2486695..2487555	-	286	86158627	-	Adeh_2205	-	Pirin-like
2198	 78.91	0	2487663..2489042	-	459	86158628	-	Adeh_2206	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
2199	 78.13	0	2489179..2490303	+	374	86158629	-	Adeh_2207	-	hypothetical protein
2200	 78.83	0	2490300..2491253	+	317	86158630	-	Adeh_2208	-	glycosyl transferase, group 1
2201	 78.46	0	2491381..2492364	+	327	86158631	-	Adeh_2209	-	ABC-type nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein
2202	 78.13	0	2492358..2494259	+	633	86158632	-	Adeh_2210	-	periplasmic sensor hybrid histidine kinase
2203	 71.88	0	2494298..2494681	+	127	86158633	-	Adeh_2211	-	4-oxalocrotonate tautomerase
2204	 78.68	0	2494697..2495587	-	296	86158634	-	Adeh_2212	-	LysR family transcriptional regulator
2205	 78.18	0	2495760..2496914	+	384	86158635	-	Adeh_2213	-	major facilitator superfamily transporter
2206	 77.85	0	2496918..2497820	-	300	86158636	-	Adeh_2214	-	LysR family transcriptional regulator
2207	 79.84	+1	2497897..2498526	+	209	86158637	-	Adeh_2215	-	nitroreductase
2208	 72.56	0	2498764..2501460	+	898	86158638	-	Adeh_2216	-	hypothetical protein
2209	 74.04	0	2501558..2501896	-	112	86158639	-	Adeh_2217	-	nitrogen regulatory protein P-II (GlnB, GlnK)
2210	 70.81	0	2502170..2503690	+	506	86158640	-	Adeh_2218	-	ammonium transporter
2211	 79.31	+1	2503771..2504205	-	144	86158641	-	Adeh_2219	-	hypothetical protein
2212	 79.38	+1	2504202..2505161	-	319	86158642	-	Adeh_2220	-	5'-3' exonuclease
2213	 73.16	0	2505357..2507606	+	749	86158643	-	Adeh_2221	-	isocitrate lyase
2214	 76.00	0	2507663..2507962	+	99	86158644	-	Adeh_2222	-	thiamineS
2215	 76.61	0	2507967..2509112	+	381	86158645	-	Adeh_2223	-	BNR repeat-containing glycosyl hydrolase
2216	 75.54	0	2509225..2510148	+	307	86158646	-	Adeh_2224	-	hypothetical protein
2217	 80.03	+1	2510312..2511538	+	408	86158647	-	Adeh_2225	-	FAD-binding monooxygenase
2218	 69.19	-1	2511618..2512568	-	316	86158648	-	Adeh_2226	-	malate dehydrogenase (NAD)
2219	 67.79	-1	2512606..2514837	-	743	86158649	-	Adeh_2227	-	isocitrate dehydrogenase, NADP-dependent
2220	 78.58	0	2515077..2516360	-	427	86158650	-	Adeh_2228	-	cyclopropane-fatty-acyl-phospholipid synthase
2221	 72.99	0	2516496..2516843	-	115	86158651	-	Adeh_2229	-	cupin domain-containing protein
2222	 75.36	0	2517042..2520170	+	1042	86158652	-	Adeh_2230	-	hypothetical protein
2223	 79.42	+1	2520198..2520644	-	148	86158653	-	Adeh_2231	-	DoxX
2224	 74.77	0	2520641..2521072	-	143	86158654	-	Adeh_2232	-	anti-sigm factor, ChrR
2225	 79.35	+1	2521129..2522595	+	488	86158655	-	Adeh_2233	-	GntR family transcriptional regulator
2226	 79.07	0	2522605..2523555	-	316	86158656	-	Adeh_2234	-	hypothetical protein
2227	 79.17	+1	2523722..2524297	-	191	86158657	-	Adeh_2235	-	hypothetical protein
2228	 69.75	-1	2524317..2527460	-	1047	86158658	-	Adeh_2236	-	acriflavin resistance protein
2229	 72.66	0	2527462..2528595	-	377	86158659	-	Adeh_2237	-	secretion protein HlyD
2230	 76.80	0	2528645..2529967	-	440	86158660	-	Adeh_2238	-	outer membrane efflux protein
2231	 75.87	0	2530146..2531546	-	466	86158661	-	Adeh_2239	-	two component, sigma54 specific, Fis family transcriptional regulator
2232	 75.18	0	2531521..2532906	-	461	86158662	-	Adeh_2240	-	periplasmic sensor signal transduction histidine kinase
2233	 80.05	+1	2533077..2533928	-	283	86158663	-	Adeh_2241	-	hypothetical protein
2234	 80.79	+1	2534037..2534942	-	301	86158664	-	Adeh_2242	-	LysR family transcriptional regulator
2235	 77.57	0	2535034..2535822	+	262	86158665	-	Adeh_2243	-	beta-lactamase fold-like Zn-dependent hydrolase
2236	 74.23	0	2535891..2536313	+	140	86158666	-	Adeh_2244	-	DoxX
2237	 76.11	0	2536331..2537833	-	500	86158667	-	Adeh_2245	-	methylmalonate-semialdehyde dehydrogenase [acylating]
2238	 78.29	0	2539309..2540538	+	409	86158668	-	Adeh_2246	-	hypothetical protein
2239	 77.21	0	2540555..2541199	+	214	86158669	-	Adeh_2247	-	hypothetical protein
2240	 72.06	0	2541209..2542711	+	500	86158670	-	Adeh_2248	-	hypothetical protein
2241	 72.59	0	2542708..2543703	+	331	86158671	-	Adeh_2249	-	hypothetical protein
2242	 75.20	0	2543864..2544847	+	327	86158672	-	Adeh_2250	-	sigma-24 (FecI-like)
2243	 76.84	0	2544861..2545715	+	284	86158673	-	Adeh_2251	-	Alpha/beta hydrolase fold-1
2244	 75.59	0	2545970..2546395	+	141	86158674	-	Adeh_2252	-	dinitrogenase iron-molybdenum cofactor biosynthesis
2245	 76.48	0	2546349..2548295	-	648	86158675	-	Adeh_2253	-	Fis family transcriptional regulator
2246	 73.50	0	2548575..2549174	+	199	86158676	-	Adeh_2254	-	OsmC-like protein
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.