IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.55   STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2009	 74.37	0	2256842..2257750	+	302	86158439	-	Adeh_2017	-	LysR family transcriptional regulator
2010	 74.56	0	2257892..2258791	+	299	86158440	-	Adeh_2018	-	HtpX-2 peptidase
2011	 68.18	-1	2258908..2259171	+	87	86158441	-	Adeh_2019	-	glutaredoxin GrxC
2012	 82.15	+1	2259298..2260776	+	492	86158442	-	Adeh_2020	-	outer membrane efflux protein
2013	 78.61	0	2260773..2261894	+	373	86158443	-	Adeh_2021	-	secretion protein HlyD
2014	 72.68	0	2261891..2265016	+	1041	86158444	-	Adeh_2022	-	acriflavin resistance protein
2015	 68.60	-1	2265074..2265280	+	68	86158445	-	Adeh_2023	-	CsbD-like protein
2016	 70.46	0	2265375..2267219	-	614	86158446	-	Adeh_2024	-	peptidyl-dipeptidase A
2017	 70.46	0	2267363..2267599	-	78	86158447	-	Adeh_2025	-	hypothetical protein
2018	 78.99	0	2267759..2268310	+	183	86158448	-	Adeh_2026	-	hypothetical protein
2019	 79.34	+1	2268324..2269175	-	283	86158449	-	Adeh_2027	-	NAD-dependent epimerase/dehydratase
2020	 72.66	0	2269311..2270144	+	277	86158450	-	Adeh_2028	-	2,5-didehydrogluconate reductase
2021	 75.69	0	2270168..2271808	-	546	86158451	-	Adeh_2029	-	phosphoglucomutase
2022	 76.75	0	2271863..2272675	+	270	86158452	-	Adeh_2030	-	hypothetical protein
2023	 77.04	0	2272786..2276208	+	1140	86158453	-	Adeh_2031	-	glycosyl transferase family protein
2024	 81.94	+1	2276239..2278326	+	695	86158454	-	Adeh_2032	-	TPR repeat-containing protein
2025	 85.27	+2	2278323..2279666	+	447	86158455	-	Adeh_2033	-	Serine/threonine protein kinase-like
2026	 77.44	0	2279694..2280380	-	228	86158456	-	Adeh_2034	-	methyltransferase type 11
2027	 84.17	+2	2280393..2281649	-	418	86158457	-	Adeh_2035	-	sporulation protein
2028	 80.56	+1	2281646..2283985	-	779	86158458	-	Adeh_2036	-	glycosyl transferase family penicillin-binding protein transpeptidase
2029	 78.11	0	2283995..2289919	-	1974	86158459	-	Adeh_2037	-	Alpha-2-macroglobulin-like protein2
2030	 78.88	0	2290104..2290799	-	231	86158460	-	Adeh_2038	-	hypothetical protein
2031	 75.75	0	2290796..2292556	-	586	86158461	aceK	Adeh_2039	-	bifunctional isocitrate dehydrogenase kinase/phosphatase protein
2032	 76.13	0	2292615..2293808	-	397	86158462	-	Adeh_2040	-	hypothetical protein
2033	 78.52	0	2293837..2295009	-	390	86158463	-	Adeh_2041	-	hypothetical protein
2034	 80.27	+1	2294999..2297527	-	842	86158464	-	Adeh_2042	-	hypothetical protein
2035	 77.05	0	2297535..2298218	-	227	86158465	-	Adeh_2043	-	ABC transporter, ATPase subunit
2036	 77.60	0	2298292..2298666	-	124	86158466	-	Adeh_2044	-	hypothetical protein
2037	 78.54	0	2298697..2299875	+	392	86158467	-	Adeh_2045	-	hypothetical protein
2038	 68.71	-1	2299931..2300566	+	211	86158468	-	Adeh_2046	-	multiple antibiotic resistance (MarC)-related proteins
2039	 70.45	0	2300608..2302563	-	651	86158469	-	Adeh_2047	-	acetyl-coenzyme A synthetase
2040	 76.38	0	2302726..2305176	-	816	86158470	-	Adeh_2048	-	glycoside hydrolase family protein
2041	 76.72	0	2305308..2306093	+	261	86158471	-	Adeh_2049	-	phosphomethylpyrimidine kinase
2042	 65.77	-1	2306106..2306438	-	110	86158472	-	Adeh_2050	-	hypothetical protein
2043	 75.00	0	2306864..2308027	+	387	86158473	purT	Adeh_2051	-	phosphoribosylglycinamide formyltransferase 2
2044	 79.34	+1	2308092..2308454	+	120	86158474	-	Adeh_2052	-	hypothetical protein
2045	 82.44	+1	2308550..2309551	+	333	86158475	-	Adeh_2053	-	methyltransferase type 11
2046	 74.63	0	2309555..2312191	-	878	86158476	-	Adeh_2054	-	AsmA
2047	 72.90	0	2312338..2314278	+	646	86158477	-	Adeh_2055	-	oligopeptidase F
2048	 76.23	0	2314275..2316533	-	752	86158478	-	Adeh_2056	-	hypothetical protein
2049	 75.70	0	2316695..2318155	+	486	86158479	-	Adeh_2057	-	cardiolipin synthetase 2
2050	 78.59	0	2318208..2318819	-	203	86158480	-	Adeh_2058	-	DTW
2051	 74.83	0	2318937..2321006	+	689	86158481	-	Adeh_2059	-	translation elongation factor 2 (EF-2/EF-G)
2052	 76.10	0	2321143..2321619	+	158	86158482	-	Adeh_2060	-	hypothetical protein
2053	 74.91	0	2321877..2323841	-	654	86158483	-	Adeh_2061	-	ABC transporter, ATPase subunit
2054	 81.58	+1	2323948..2324946	+	332	86158484	-	Adeh_2062	-	hypothetical protein
2055	 78.40	0	2325057..2326019	+	320	86158485	-	Adeh_2063	-	sphingosine kinase
2056	 75.76	0	2326168..2326728	+	186	86158486	-	Adeh_2064	-	hypothetical protein
2057	 70.05	0	2326748..2327338	+	196	86158487	-	Adeh_2065	-	putative lipoprotein
2058	 76.80	0	2327348..2328571	+	407	86158488	-	Adeh_2066	-	hypothetical protein
2059	 79.61	+1	2328691..2330127	+	478	86158489	-	Adeh_2067	-	diacylglycerol O-acyltransferase
2060	 67.10	-1	2330108..2331730	-	540	86158490	-	Adeh_2068	-	fumarase
2061	 78.60	0	2331922..2333052	-	376	86158491	-	Adeh_2069	-	acyltransferase 3
2062	 73.16	0	2333073..2334134	-	353	86158492	-	Adeh_2070	-	3-isopropylmalate dehydrogenase
2063	 71.50	0	2334169..2335719	-	516	86158493	-	Adeh_2071	-	alpha-isopropylmalate/homocitrate synthase family transferase
2064	 73.93	0	2335895..2336128	-	77	86158494	-	Adeh_2072	-	hypothetical protein
2065	 76.41	0	2336262..2336990	+	242	86158495	-	Adeh_2073	-	hypothetical protein
2066	 70.68	0	2337090..2337413	+	107	86158496	-	Adeh_2074	-	peptidylprolyl isomerase, FKBP-type
2067	 71.40	0	2337533..2338060	+	175	86158497	-	Adeh_2075	-	rubrerythrin
2068	 74.73	0	2338073..2339089	-	338	86158498	-	Adeh_2076	-	aldo/keto reductase
2069	 76.81	0	2339153..2339704	-	183	86158499	-	Adeh_2077	-	ribonuclease H
2070	 77.05	0	2339820..2340599	+	259	86158500	-	Adeh_2078	-	1-acyl-sn-glycerol-3-phosphate acyltransferase
2071	 75.60	0	2340574..2342028	-	484	86158501	-	Adeh_2079	-	peptidase M20C, Xaa-His dipeptidase
2072	 74.40	0	2342242..2342823	+	193	86158502	-	Adeh_2080	-	hypothetical protein
2073	 82.43	+1	2342820..2343701	-	293	86158503	-	Adeh_2081	-	hypothetical protein
2074	 83.33	+1	2343742..2344149	-	135	86158504	-	Adeh_2082	-	peptidoglycan-binding protein
2075	 74.70	0	2344146..2345303	-	385	86158505	-	Adeh_2083	-	hypothetical protein
2076	 78.45	0	2345369..2346454	-	361	86158506	-	Adeh_2084	-	Cys/Met metabolism pyridoxal-phosphate-dependent enzymes
2077	 68.19	-1	2346580..2347764	+	394	86158507	-	Adeh_2085	-	pyrophosphate-dependent phosphofructokinase
2078	 77.26	0	2347819..2348649	-	276	86158508	-	Adeh_2086	-	putative formate dehydrogenase formation protein
2079	 70.81	0	2348735..2350930	-	731	86158509	-	Adeh_2087	-	4Fe-4S ferredoxin, iron-sulfur binding protein
2080	 67.16	-1	2350958..2353396	-	812	86158510	-	Adeh_2088	-	formate dehydrogenase
2081	 68.58	-1	2353445..2354020	-	191	86158511	-	Adeh_2089	-	molybdopterin oxidoreductase Fe4S4 region
2082	 77.36	0	2354500..2356791	+	763	86158512	-	Adeh_2090	-	GAF sensor signal transduction histidine kinase
2083	 79.93	+1	2356807..2357643	-	278	86158513	-	Adeh_2091	-	DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII
2084	 78.79	0	2357643..2362253	-	1536	86158514	-	Adeh_2092	-	DEAD/DEAH box helicase-like
2085	 84.47	+2	2362263..2362919	-	218	86158515	-	Adeh_2093	-	hypothetical protein
2086	 72.38	0	2363097..2364287	+	396	86158516	-	Adeh_2094	-	2-amino-3-ketobutyrate coenzyme A ligase
2087	 70.33	0	2364316..2365353	+	345	86158517	tdh	Adeh_2095	-	L-threonine 3-dehydrogenase
2088	 70.80	0	2365858..2367405	+	515	86158518	-	Adeh_2096	-	flavocytochrome c
2089	 75.94	0	2367730..2368182	+	150	86158519	-	Adeh_2097	-	hypothetical protein
2090	 74.79	0	2368179..2369360	+	393	86158520	-	Adeh_2098	-	hypothetical protein
2091	 76.88	0	2369537..2370388	+	283	86158521	-	Adeh_2099	-	phosphoesterase, PA-phosphatase related
2092	 69.99	-1	2370554..2371876	-	440	86158522	-	Adeh_2100	-	Sodium/dicarboxylate symporter
2093	 72.34	0	2372214..2373623	-	469	86158523	-	Adeh_2101	-	two component, sigma54 specific, Fis family transcriptional regulator
2094	 75.00	0	2373620..2375347	-	575	86158524	-	Adeh_2102	-	histidine kinase
2095	 70.63	0	2376240..2378057	-	605	86158525	-	Adeh_2103	-	cytochrome c assembly protein
2096	 69.21	-1	2378054..2379232	-	392	86158526	-	Adeh_2104	-	hypothetical protein
2097	 73.91	0	2379219..2379908	-	229	86158527	-	Adeh_2105	-	hypothetical protein
2098	 75.74	0	2380213..2381160	+	315	86158528	-	Adeh_2106	-	cation diffusion facilitator family transporter
2099	 74.70	0	2381245..2382066	+	273	86158529	-	Adeh_2107	-	methyltransferase type 11
2100	 70.87	0	2382185..2383255	+	356	86158530	-	Adeh_2108	-	phospho-2-dehydro-3-deoxyheptonate aldolase
2101	 73.14	0	2383259..2384371	-	370	86158531	-	Adeh_2109	-	L-alanine dehydrogenase
2102	 74.55	0	2384496..2384888	+	130	86158532	-	Adeh_2110	-	TraR/DksA family transcriptional regulator
2103	 71.00	0	2384927..2385295	+	122	86158533	-	Adeh_2111	-	glyoxalase I
2104	 71.59	0	2385292..2386917	-	541	86158534	-	Adeh_2112	-	peptide chain release factor 3
2105	 73.65	0	2387078..2387521	-	147	86158535	-	Adeh_2113	-	GCN5-related N-acetyltransferase
2106	 73.62	0	2387651..2388643	+	330	86158536	-	Adeh_2114	-	GTP-binding protein, HSR1-related
2107	 72.76	0	2389121..2390089	+	322	86158537	-	Adeh_2115	-	HNH endonuclease
2108	 72.00	0	2390086..2390760	+	224	86158538	-	Adeh_2116	-	hypothetical protein
74.55	MEAN

4.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.