IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1762	 78.56	0	2025477..2027099	-	540	86158192	-	Adeh_1767	-	hypothetical protein
1763	 74.74	0	2027096..2027863	-	255	86158193	-	Adeh_1768	-	ABC transporter, ATPase subunit
1764	 71.20	0	2027955..2028329	-	124	86158194	-	Adeh_1769	-	hypothetical protein
1765	 75.28	0	2028532..2029146	+	204	86158195	-	Adeh_1770	-	hypothetical protein
1766	 72.95	0	2029213..2030787	-	524	86158196	-	Adeh_1771	-	peptidase S1C, Do
1767	 75.92	0	2030903..2031529	-	208	86158197	-	Adeh_1772	-	GrpE protein
1768	 76.32	0	2031587..2031814	-	75	86158198	-	Adeh_1773	-	hypothetical protein
1769	 74.11	0	2031830..2033938	-	702	86158199	-	Adeh_1774	-	FtsH-2 peptidase
1770	 71.28	0	2034135..2034524	-	129	86158200	-	Adeh_1775	-	NUDIX hydrolase
1771	 76.07	0	2034615..2035997	+	460	86158201	-	Adeh_1776	-	RNA-metabolising metallo-beta-lactamase
1772	 76.83	0	2035994..2037253	+	419	86158202	-	Adeh_1777	-	patatin
1773	 84.03	+2	2037250..2038113	+	287	86158203	-	Adeh_1778	-	homocysteine S-methyltransferase
1774	 76.02	0	2038110..2038943	-	277	86158204	-	Adeh_1779	-	prephenate dehydratase
1775	 74.04	0	2038984..2039661	-	225	86158205	-	Adeh_1780	-	HAD family hydrolase
1776	 77.66	0	2039815..2040105	+	96	86158206	-	Adeh_1781	-	hypothetical protein
1777	 75.13	0	2040155..2042020	+	621	86158207	-	Adeh_1782	-	PAS/PAC sensor signal transduction histidine kinase
1778	 75.93	0	2042017..2042847	-	276	86158208	-	Adeh_1783	-	hypothetical protein
1779	 74.06	0	2042936..2043679	+	247	86158209	-	Adeh_1784	-	hypothetical protein
1780	 74.51	0	2043633..2045111	-	492	86158210	-	Adeh_1785	-	hypothetical protein
1781	 75.57	0	2045181..2045573	-	130	86158211	-	Adeh_1786	-	hypothetical protein
1782	 72.01	0	2045795..2046337	-	180	86158212	-	Adeh_1787	-	hypothetical protein
1783	 76.00	0	2046375..2046749	+	124	86158213	-	Adeh_1788	-	hypothetical protein
1784	 71.86	0	2046739..2046969	+	76	86158214	-	Adeh_1789	-	hypothetical protein
1785	 71.09	0	2047037..2047330	+	97	86158215	-	Adeh_1790	-	hypothetical protein
1786	 69.94	-1	2047468..2047986	+	172	86158216	-	Adeh_1791	-	hypothetical protein
1787	 81.14	+1	2048241..2048627	+	128	86158217	-	Adeh_1792	-	hypothetical protein
1788	 75.43	0	2049070..2051145	+	691	86158218	-	Adeh_1793	-	hypothetical protein
1789	 65.22	-2	2051142..2051417	+	91	86158219	-	Adeh_1794	-	hypothetical protein
1790	 76.62	0	2051414..2051875	+	153	86158220	-	Adeh_1795	-	hypothetical protein
1791	 78.33	0	2051882..2052181	+	99	86158221	-	Adeh_1796	-	hypothetical protein
1792	 73.75	0	2052228..2052806	+	192	86158222	-	Adeh_1797	-	hypothetical protein
1793	 73.50	0	2052803..2053168	+	121	86158223	-	Adeh_1798	-	hypothetical protein
1794	 71.43	0	2053172..2053591	+	139	86158224	-	Adeh_1799	-	hypothetical protein
1795	 81.48	+1	2053607..2053930	+	107	86158225	-	Adeh_1800	-	hypothetical protein
1796	 71.67	0	2053930..2054628	+	232	86158226	-	Adeh_1801	-	terminase small subunit
1797	 72.25	0	2054621..2056519	+	632	86158227	-	Adeh_1802	-	hypothetical protein
1798	 73.95	0	2056739..2057452	+	237	86158228	-	Adeh_1803	-	hypothetical protein
1799	 75.89	0	2058932..2059267	-	111	86158229	-	Adeh_1805	-	hypothetical protein
1800	 77.13	0	2059276..2059686	-	136	86158230	-	Adeh_1806	-	hypothetical protein
1801	 69.50	-1	2059689..2061311	-	540	86158231	-	Adeh_1807	-	heat shock protein 70
1802	 73.37	0	2061373..2063550	-	725	86158232	-	Adeh_1808	-	UvrD/REP helicase
1803	 80.63	+1	2063689..2064354	+	221	86158233	-	Adeh_1809	-	hypothetical protein
1804	 80.68	+1	2064336..2065934	-	532	86158234	-	Adeh_1810	-	amidohydrolase 3
1805	 74.69	0	2066069..2067277	-	402	86158235	-	Adeh_1811	-	glycosyl transferase family protein
1806	 83.15	+1	2067329..2068924	-	531	86158236	-	Adeh_1812	-	zinc finger/thioredoxin putative
1807	 81.80	+1	2068980..2069501	-	173	86158237	-	Adeh_1813	-	DNA uptake protein
1808	 76.56	0	2069519..2071045	+	508	86158238	-	Adeh_1814	-	histidine ammonia-lyase
1809	 67.67	-1	2071094..2072491	-	465	161897777	-	Adeh_1815	-	aspartate kinase
1810	 75.68	0	2072713..2073078	-	121	86158240	-	Adeh_1816	-	FHA domain-containing protein
1811	 67.76	-1	2073093..2074553	-	486	86158241	-	Adeh_1817	-	hypothetical protein
1812	 79.22	+1	2074810..2078673	+	1287	86158242	-	Adeh_1818	-	TPR repeat-containing serine/threonin protein kinase
1813	 79.17	+1	2078698..2080320	-	540	86158243	-	Adeh_1819	-	OPT superfamily oligopeptide transporter
1814	 78.39	0	2080348..2081703	+	451	86158244	-	Adeh_1820	-	serine/threonine protein kinase
1815	 75.96	0	2081687..2082784	-	365	86158245	-	Adeh_1821	-	lipoate-protein ligase B
1816	 72.16	0	2082852..2084306	-	484	86158246	-	Adeh_1822	-	dihydrolipoamide dehydrogenase
1817	 77.78	0	2084522..2085376	-	284	86158247	-	Adeh_1823	-	UBA/THIF-type NAD/FAD binding fold
1818	 79.92	+1	2085411..2086187	-	258	86158248	-	Adeh_1824	-	TatD-related deoxyribonuclease
1819	 74.72	0	2086184..2087512	-	442	86158249	-	Adeh_1825	-	pyruvate dehydrogenase-like complex E2 component
1820	 69.64	-1	2087526..2088500	-	324	86158250	-	Adeh_1826	-	branched-chain alpha-keto acid dehydrogenase E1 component
1821	 72.78	0	2088514..2089707	-	397	86158251	-	Adeh_1827	-	3-methyl-2-oxobutanoate dehydrogenase (lipoamide)
1822	 73.09	0	2089722..2090702	-	326	86158252	-	Adeh_1828	-	lipoyl synthase
1823	 71.23	0	2090860..2091933	+	357	86158253	-	Adeh_1829	-	response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase
1824	 75.82	0	2092007..2093011	+	334	86158254	-	Adeh_1830	-	GTP cyclohydrolase subunit MoaA
1825	 78.89	0	2093023..2094192	-	389	86158255	-	Adeh_1831	-	peptidase C45, acyl-coenzyme A - 6-aminopenicillanic acid acyl-transferase
1826	 70.92	0	2094327..2094749	-	140	86158256	-	Adeh_1832	-	methylmalonyl-CoA mutase
1827	 77.74	0	2094746..2095540	-	264	86158257	-	Adeh_1833	-	methyltransferase type 11
1828	 71.42	0	2095568..2097334	-	588	86158258	-	Adeh_1834	-	methylmalonyl-CoA mutase
1829	 70.39	0	2097739..2098947	+	402	86158259	-	Adeh_1835	-	Phage integrase
1830	 70.50	0	2099197..2099535	+	112	86158260	-	Adeh_1836	-	hypothetical protein
1831	 69.02	-1	2099532..2099786	+	84	86158261	-	Adeh_1837	-	hypothetical protein
1832	 68.31	-1	2099758..2100000	+	80	86158262	-	Adeh_1838	-	hypothetical protein
1833	 66.00	-1	2099997..2102252	+	751	86158263	-	Adeh_1839	-	hypothetical protein
1834	 71.10	0	2102671..2103234	+	187	86158264	-	Adeh_1840	-	hypothetical protein
1835	 67.62	-1	2103221..2103535	+	104	86158265	-	Adeh_1841	-	hypothetical protein
1836	 69.91	-1	2103538..2103876	+	112	86158266	-	Adeh_1842	-	hypothetical protein
1837	 59.10	-2	2103885..2104439	-	184	86158267	-	Adeh_1843	-	hypothetical protein
1838	 70.26	0	2104545..2106383	+	612	86158268	-	Adeh_1844	-	peptidase U35, phage prohead HK97
1839	 57.84	-2	2106624..2107076	+	150	86158269	-	Adeh_1845	-	hypothetical protein
1840	 61.90	-2	2107079..2107834	+	251	86158270	-	Adeh_1846	-	hypothetical protein
1841	 62.53	-2	2108170..2109618	-	482	86158271	-	Adeh_1847	-	chromosome segregation ATPase
1842	 68.17	-1	2109706..2110236	+	176	86158272	-	Adeh_1848	-	hypothetical protein
1843	 68.46	-1	2110259..2110648	-	129	86158273	-	Adeh_1849	-	hypothetical protein
1844	 62.69	-2	2110651..2111883	-	410	86158274	-	Adeh_1850	-	hypothetical protein
1845	 66.67	-1	2111912..2112226	-	104	86158275	-	Adeh_1851	-	hypothetical protein
1846	 77.91	0	2112386..2113168	-	260	86158276	-	Adeh_1852	-	hypothetical protein
1847	 72.88	0	2113182..2114114	-	310	86158277	-	Adeh_1853	-	hypothetical protein
1848	 71.94	0	2114342..2115118	+	258	86158278	-	Adeh_1854	-	short chain enoyl-CoA hydratase
1849	 73.33	0	2115134..2115583	-	149	86158279	-	Adeh_1855	-	hypothetical protein
1850	 75.98	0	2115659..2117731	-	690	86158280	-	Adeh_1856	-	hypothetical protein
1851	 74.54	0	2118210..2119301	-	363	86158281	-	Adeh_1857	-	hypothetical protein
1852	 78.06	0	2119351..2120289	-	312	86158282	-	Adeh_1858	-	D-isomer specific 2-hydroxyacid dehydrogenase
1853	 75.00	0	2120286..2120489	-	67	86158283	-	Adeh_1859	-	hypothetical protein
1854	 74.33	0	2120534..2121055	-	173	86158284	-	Adeh_1860	-	cytochrome c biogenesis protein, thiol-disulfide interchange protein
1855	 70.54	0	2121159..2122862	-	567	86158285	-	Adeh_1861	-	hypothetical protein
1856	 68.94	-1	2122879..2123625	-	248	86158286	-	Adeh_1862	-	ABC transporter, ATPase subunit
1857	 70.24	0	2123628..2124383	-	251	86158287	-	Adeh_1863	-	ABC amino acid transporter, inner membrane subunit
1858	 72.58	0	2124499..2124921	+	140	86158288	-	Adeh_1864	-	hypothetical protein
1859	 80.58	+1	2124918..2125643	-	241	86158289	-	Adeh_1865	-	ribosomal large subunit pseudouridine synthase A
1860	 75.30	0	2125640..2126959	-	439	86158290	-	Adeh_1866	-	peptidase M16-like
1861	 74.31	0	2126956..2128329	-	457	86158291	-	Adeh_1867	-	peptidase M16-like
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.