IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.55   STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1707	 74.43	0	1965469..1966035	+	188	86158137	-	Adeh_1712	-	hypothetical protein
1708	 78.46	0	1966032..1966565	-	177	86158138	-	Adeh_1713	-	hypothetical protein
1709	 71.25	0	1966648..1966974	-	108	86158139	-	Adeh_1714	-	hypothetical protein
1710	 78.11	0	1967285..1969111	-	608	86158140	-	Adeh_1715	-	DNA mismatch repair protein MutL
1711	 79.25	+1	1969647..1970504	+	285	86158141	-	Adeh_1716	-	phospholipid/glycerol acyltransferase
1712	 73.96	0	1970515..1971378	-	287	86158142	-	Adeh_1717	-	Delta-9 acyl-phospholipid desaturase
1713	 72.68	0	1971540..1971938	+	132	86158143	-	Adeh_1718	-	hypothetical protein
1714	 77.13	0	1971935..1972861	-	308	86158144	-	Adeh_1719	-	hypothetical protein
1715	 76.63	0	1973071..1973823	-	250	86158145	-	Adeh_1720	-	molybdopterin binding domain-containing protein
1716	 78.84	0	1973866..1974522	-	218	86158146	-	Adeh_1721	-	thymidylate kinase
1717	 74.80	0	1974519..1974899	-	126	86158147	-	Adeh_1722	-	hypothetical protein
1718	 73.07	0	1974911..1976269	-	452	86158148	-	Adeh_1723	-	L-threonine synthase
1719	 72.64	0	1976272..1977477	-	401	86158149	-	Adeh_1724	-	aminotransferase
1720	 79.46	+1	1977528..1978082	-	184	86158150	-	Adeh_1725	-	hypothetical protein
1721	 75.87	0	1978093..1978722	-	209	86158151	-	Adeh_1726	-	protein-L-isoaspartate O-methyltransferase
1722	 76.67	0	1978808..1981126	-	772	86158152	-	Adeh_1727	-	ATP-dependent DNA helicase RecG
1723	 68.26	-1	1981538..1982038	-	166	86158153	-	Adeh_1728	-	GreA/GreB family elongation factor
1724	 71.15	0	1982166..1985399	-	1077	86158154	carB	Adeh_1729	-	carbamoyl phosphate synthase large subunit
1725	 77.91	0	1985535..1986032	-	165	86158155	-	Adeh_1730	-	cyclic nucleotide-binding domain-containing protein
1726	 68.50	-1	1986087..1987289	-	400	86158156	-	Adeh_1731	-	L-aspartate aminotransferase
1727	 67.68	-1	1987437..1987931	-	164	86158157	-	Adeh_1732	-	coenzyme A biosynthesis protein, cytidyltransferase-related
1728	 77.78	0	1987951..1988490	-	179	86158158	-	Adeh_1733	-	hypothetical protein
1729	 81.18	+1	1988487..1989416	-	309	86158159	-	Adeh_1734	-	hypothetical protein
1730	 72.89	0	1989473..1990501	-	342	86158160	-	Adeh_1735	-	cation diffusion facilitator family transporter
1731	 76.74	0	1990629..1991591	+	320	86158161	-	Adeh_1736	-	Alpha/beta hydrolase fold-1
1732	 76.45	0	1991588..1994653	+	1021	86158162	-	Adeh_1737	-	WD-40-like beta propeller repeat-containing protein
1733	 77.87	0	1994650..1996398	-	582	86158163	-	Adeh_1738	-	HNH nuclease
1734	 67.50	-1	1997218..1998294	+	358	86158164	-	Adeh_1739	-	hypothetical protein
1735	 67.80	-1	1998278..1998718	+	146	86158165	-	Adeh_1740	-	hypothetical protein
1736	 68.10	-1	1998747..2000210	+	487	86158166	-	Adeh_1741	-	hypothetical protein
1737	 68.92	-1	2000706..2001104	-	132	86158167	-	Adeh_1742	-	hypothetical protein
1738	 73.63	0	2001280..2001552	-	90	86158168	-	Adeh_1743	-	LysR family transcriptional regulator
1739	 74.13	0	2001679..2002428	+	249	86158169	-	Adeh_1744	-	methionine aminopeptidase, type I
1740	 78.93	0	2002558..2003079	+	173	86158170	-	Adeh_1745	-	hypothetical protein
1741	 79.70	+1	2003104..2003778	-	224	86158171	-	Adeh_1746	-	hypothetical protein
1742	 77.25	0	2003775..2004473	-	232	86158172	-	Adeh_1747	-	sigma-24 (FecI-like)
1743	 76.72	0	2004598..2004975	-	125	86158173	-	Adeh_1748	-	hypothetical protein
1744	 76.66	0	2005119..2006609	+	496	86158174	-	Adeh_1749	-	Beta-lactamase
1745	 75.81	0	2006659..2007183	+	174	86158175	-	Adeh_1750	-	hypothetical protein
1746	 76.79	0	2007185..2007658	+	157	86158176	-	Adeh_1751	-	hypothetical protein
1747	 72.01	0	2007734..2008351	-	205	86158177	-	Adeh_1752	-	hypothetical protein
1748	 70.81	0	2008499..2008957	+	152	86158178	-	Adeh_1753	-	GCN5-related N-acetyltransferase
1749	 70.90	0	2009077..2009478	+	133	86158179	-	Adeh_1754	-	globin like protein
1750	 70.92	0	2009592..2010626	-	344	86158180	-	Adeh_1755	-	outer membrane protein (porin)
1751	 71.29	0	2010664..2012025	-	453	86158181	-	Adeh_1756	-	anaerobic C4-dicarboxylate transporter
1752	 69.77	-1	2012038..2013486	-	482	86158182	aspA	Adeh_1757	-	aspartate ammonia-lyase
1753	 73.83	0	2013726..2015162	-	478	86158183	-	Adeh_1758	-	two component, sigma54 specific, Fis family transcriptional regulator
1754	 74.71	0	2015159..2016949	-	596	86158184	-	Adeh_1759	-	histidine kinase
1755	 76.78	0	2017061..2017426	-	121	86158185	-	Adeh_1760	-	hypothetical protein
1756	 72.42	0	2017423..2018586	-	387	86158186	-	Adeh_1761	-	C4-dicarboxylate transporter/malic acid transport protein
1757	 72.67	0	2018694..2019326	-	210	86158187	-	Adeh_1762	-	two component LuxR family transcriptional regulator
1758	 77.93	0	2019304..2021088	-	594	86158188	-	Adeh_1763	-	periplasmic sensor signal transduction histidine kinase
1759	 74.00	0	2021153..2022760	-	535	86158189	-	Adeh_1764	-	hypothetical protein
1760	 76.41	0	2022938..2023522	-	194	86158190	-	Adeh_1765	-	hypothetical protein
1761	 67.65	-1	2023845..2025371	+	508	86158191	-	Adeh_1766	-	glutamate dehydrogenase (NADP)
1762	 78.56	0	2025477..2027099	-	540	86158192	-	Adeh_1767	-	hypothetical protein
1763	 74.74	0	2027096..2027863	-	255	86158193	-	Adeh_1768	-	ABC transporter, ATPase subunit
1764	 71.20	0	2027955..2028329	-	124	86158194	-	Adeh_1769	-	hypothetical protein
1765	 75.28	0	2028532..2029146	+	204	86158195	-	Adeh_1770	-	hypothetical protein
1766	 72.95	0	2029213..2030787	-	524	86158196	-	Adeh_1771	-	peptidase S1C, Do
1767	 75.92	0	2030903..2031529	-	208	86158197	-	Adeh_1772	-	GrpE protein
1768	 76.32	0	2031587..2031814	-	75	86158198	-	Adeh_1773	-	hypothetical protein
1769	 74.11	0	2031830..2033938	-	702	86158199	-	Adeh_1774	-	FtsH-2 peptidase
1770	 71.28	0	2034135..2034524	-	129	86158200	-	Adeh_1775	-	NUDIX hydrolase
1771	 76.07	0	2034615..2035997	+	460	86158201	-	Adeh_1776	-	RNA-metabolising metallo-beta-lactamase
1772	 76.83	0	2035994..2037253	+	419	86158202	-	Adeh_1777	-	patatin
1773	 84.03	+2	2037250..2038113	+	287	86158203	-	Adeh_1778	-	homocysteine S-methyltransferase
1774	 76.02	0	2038110..2038943	-	277	86158204	-	Adeh_1779	-	prephenate dehydratase
1775	 74.04	0	2038984..2039661	-	225	86158205	-	Adeh_1780	-	HAD family hydrolase
1776	 77.66	0	2039815..2040105	+	96	86158206	-	Adeh_1781	-	hypothetical protein
1777	 75.13	0	2040155..2042020	+	621	86158207	-	Adeh_1782	-	PAS/PAC sensor signal transduction histidine kinase
1778	 75.93	0	2042017..2042847	-	276	86158208	-	Adeh_1783	-	hypothetical protein
1779	 74.06	0	2042936..2043679	+	247	86158209	-	Adeh_1784	-	hypothetical protein
1780	 74.51	0	2043633..2045111	-	492	86158210	-	Adeh_1785	-	hypothetical protein
1781	 75.57	0	2045181..2045573	-	130	86158211	-	Adeh_1786	-	hypothetical protein
1782	 72.01	0	2045795..2046337	-	180	86158212	-	Adeh_1787	-	hypothetical protein
1783	 76.00	0	2046375..2046749	+	124	86158213	-	Adeh_1788	-	hypothetical protein
1784	 71.86	0	2046739..2046969	+	76	86158214	-	Adeh_1789	-	hypothetical protein
1785	 71.09	0	2047037..2047330	+	97	86158215	-	Adeh_1790	-	hypothetical protein
1786	 69.94	-1	2047468..2047986	+	172	86158216	-	Adeh_1791	-	hypothetical protein
1787	 81.14	+1	2048241..2048627	+	128	86158217	-	Adeh_1792	-	hypothetical protein
1788	 75.43	0	2049070..2051145	+	691	86158218	-	Adeh_1793	-	hypothetical protein
1789	 65.22	-2	2051142..2051417	+	91	86158219	-	Adeh_1794	-	hypothetical protein
1790	 76.62	0	2051414..2051875	+	153	86158220	-	Adeh_1795	-	hypothetical protein
1791	 78.33	0	2051882..2052181	+	99	86158221	-	Adeh_1796	-	hypothetical protein
1792	 73.75	0	2052228..2052806	+	192	86158222	-	Adeh_1797	-	hypothetical protein
1793	 73.50	0	2052803..2053168	+	121	86158223	-	Adeh_1798	-	hypothetical protein
1794	 71.43	0	2053172..2053591	+	139	86158224	-	Adeh_1799	-	hypothetical protein
1795	 81.48	+1	2053607..2053930	+	107	86158225	-	Adeh_1800	-	hypothetical protein
1796	 71.67	0	2053930..2054628	+	232	86158226	-	Adeh_1801	-	terminase small subunit
1797	 72.25	0	2054621..2056519	+	632	86158227	-	Adeh_1802	-	hypothetical protein
1798	 73.95	0	2056739..2057452	+	237	86158228	-	Adeh_1803	-	hypothetical protein
1799	 75.89	0	2058932..2059267	-	111	86158229	-	Adeh_1805	-	hypothetical protein
1800	 77.13	0	2059276..2059686	-	136	86158230	-	Adeh_1806	-	hypothetical protein
1801	 69.50	-1	2059689..2061311	-	540	86158231	-	Adeh_1807	-	heat shock protein 70
1802	 73.37	0	2061373..2063550	-	725	86158232	-	Adeh_1808	-	UvrD/REP helicase
1803	 80.63	+1	2063689..2064354	+	221	86158233	-	Adeh_1809	-	hypothetical protein
1804	 80.68	+1	2064336..2065934	-	532	86158234	-	Adeh_1810	-	amidohydrolase 3
1805	 74.69	0	2066069..2067277	-	402	86158235	-	Adeh_1811	-	glycosyl transferase family protein
1806	 83.15	+1	2067329..2068924	-	531	86158236	-	Adeh_1812	-	zinc finger/thioredoxin putative
74.55	MEAN

4.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.