IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.55   STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1654	 76.12	0	1902535..1903941	-	468	86158084	-	Adeh_1659	-	cytochrome c family protein
1655	 81.47	+1	1904149..1906053	+	634	86158085	-	Adeh_1660	-	hypothetical protein
1656	 76.04	0	1906077..1906460	-	127	86158086	-	Adeh_1661	-	hypothetical protein
1657	 74.85	0	1906636..1907283	-	215	86158087	-	Adeh_1662	-	MerR family transcriptional regulator
1658	 73.78	0	1907452..1908126	+	224	86158088	-	Adeh_1663	-	GTP cyclohydrolase II
1659	 76.12	0	1908147..1909310	-	387	86158089	-	Adeh_1664	-	butyryl-CoA dehydrogenase
1660	 70.34	0	1909392..1910534	-	380	86158090	-	Adeh_1665	-	butyryl-CoA dehydrogenase
1661	 75.10	0	1910608..1911390	-	260	86158091	-	Adeh_1666	-	short chain enoyl-CoA hydratase
1662	 71.91	0	1911403..1912260	-	285	86158092	-	Adeh_1667	-	3-hydroxyacyl-CoA dehydrogenase
1663	 79.34	+1	1912399..1914591	+	730	86158093	-	Adeh_1668	-	PAS/PAC sensor signal transduction histidine kinase
1664	 68.97	-1	1914696..1915259	-	187	86158094	-	Adeh_1669	-	hypothetical protein
1665	 84.13	+2	1915458..1917089	-	543	86158095	-	Adeh_1670	-	hypothetical protein
1666	 79.82	+1	1917224..1917793	-	189	86158096	-	Adeh_1671	-	dual specificity protein phosphatase
1667	 77.78	0	1917868..1918209	-	113	86158097	-	Adeh_1672	-	hypothetical protein
1668	 75.76	0	1918206..1918700	-	164	86158098	-	Adeh_1673	-	hypothetical protein
1669	 72.47	0	1918715..1919800	-	361	86158099	-	Adeh_1674	-	hypothetical protein
1670	 71.01	0	1920325..1921269	+	314	86158100	-	Adeh_1675	-	magnesium and cobalt transport protein CorA
1671	 77.78	0	1921273..1922388	-	371	86158101	-	Adeh_1676	-	RNA-3'-phosphate cyclase
1672	 75.36	0	1922479..1923720	+	413	86158102	-	Adeh_1677	-	arsenical pump membrane protein
1673	 74.43	0	1923845..1924501	+	218	86158103	-	Adeh_1678	-	sigma-24 (FecI-like)
1674	 78.28	0	1924498..1925031	+	177	86158104	-	Adeh_1679	-	hypothetical protein
1675	 76.02	0	1925043..1926806	+	587	86158105	-	Adeh_1680	-	hypothetical protein
1676	 85.50	+2	1926803..1928836	-	677	86158106	-	Adeh_1681	-	PE-PGRS family protein
1677	 78.62	0	1928895..1929881	-	328	86158107	-	Adeh_1682	-	ribosomal large subunit pseudouridine synthase B
1678	 76.03	0	1929885..1931048	-	387	86158108	-	Adeh_1683	-	condensin subunit ScpB
1679	 72.63	0	1931045..1931950	-	301	86158109	-	Adeh_1684	-	condensin subunit ScpA
1680	 67.37	-1	1931979..1932974	-	331	86158110	-	Adeh_1685	-	tryptophanyl-tRNA synthetase
1681	 70.10	0	1932992..1933660	-	222	86158111	-	Adeh_1686	-	peptidase M50
1682	 75.03	0	1933810..1934754	-	314	86158112	-	Adeh_1687	-	tyrosine recombinase XerD subunit
1683	 72.13	0	1934763..1935458	-	231	86158113	-	Adeh_1688	-	translation factor SUA5
1684	 72.31	0	1935501..1935695	-	64	86158114	-	Adeh_1689	-	hypothetical protein
1685	 68.18	-1	1935720..1936115	-	131	86158115	-	Adeh_1690	-	hypothetical protein
1686	 76.08	0	1936108..1937052	-	314	86158116	-	Adeh_1691	-	SSU ribosomal protein S6P modification protein
1687	 75.15	0	1937275..1940067	-	930	86158117	-	Adeh_1692	-	metal dependent phosphohydrolase
1688	 78.01	0	1940113..1941981	-	622	86158118	-	Adeh_1693	-	glycyl aminopeptidase
1689	 79.26	+1	1942082..1943908	-	608	86158119	-	Adeh_1694	-	N-acetylmuramoyl-L-alanine amidase
1690	 73.57	0	1944063..1944728	+	221	86158120	-	Adeh_1695	-	isoprenoid biosynthesis protein
1691	 69.44	-1	1944895..1945182	+	95	86158121	-	Adeh_1696	-	cytochrome c3
1692	 68.10	-1	1945403..1945681	+	92	86158122	-	Adeh_1697	-	cytochrome c, class III
1693	 75.61	0	1945761..1948409	-	882	86158123	-	Adeh_1698	-	DNA mismatch repair protein MutS
1694	 72.40	0	1948492..1950165	+	557	86158124	-	Adeh_1699	-	2-octaprenylphenol hydroxylase
1695	 83.55	+1	1950181..1951086	-	301	86158125	-	Adeh_1700	-	hypothetical protein
1696	 69.57	-1	1951204..1951893	+	229	86158126	-	Adeh_1701	-	SOS-response transcriptional repressor, LexA
1697	 77.49	0	1952047..1952277	+	76	86158127	-	Adeh_1702	-	hypothetical protein
1698	 79.47	+1	1952350..1953771	-	473	86158128	-	Adeh_1703	-	hypothetical protein
1699	 75.30	0	1953775..1954677	-	300	86158129	-	Adeh_1704	-	hypothetical protein
1700	 76.83	0	1954682..1955488	-	268	86158130	-	Adeh_1705	-	metallophosphoesterase
1701	 81.40	+1	1955520..1956761	+	413	86158131	-	Adeh_1706	-	hypothetical protein
1702	 68.88	-1	1957114..1959645	+	843	86158132	-	Adeh_1707	-	ATP-dependent protease La
1703	 79.98	+1	1959673..1960776	+	367	86158133	-	Adeh_1708	-	NAD-dependent epimerase/dehydratase
1704	 79.17	+1	1960998..1962788	+	596	86158134	-	Adeh_1709	-	serine/threonine protein kinase
1705	 72.28	0	1962785..1963639	+	284	86158135	-	Adeh_1710	-	TPR repeat-containing protein
1706	 71.32	0	1963646..1965472	+	608	86158136	-	Adeh_1711	-	NifA subfamily transcriptional regulator
1707	 74.43	0	1965469..1966035	+	188	86158137	-	Adeh_1712	-	hypothetical protein
1708	 78.46	0	1966032..1966565	-	177	86158138	-	Adeh_1713	-	hypothetical protein
1709	 71.25	0	1966648..1966974	-	108	86158139	-	Adeh_1714	-	hypothetical protein
1710	 78.11	0	1967285..1969111	-	608	86158140	-	Adeh_1715	-	DNA mismatch repair protein MutL
1711	 79.25	+1	1969647..1970504	+	285	86158141	-	Adeh_1716	-	phospholipid/glycerol acyltransferase
1712	 73.96	0	1970515..1971378	-	287	86158142	-	Adeh_1717	-	Delta-9 acyl-phospholipid desaturase
1713	 72.68	0	1971540..1971938	+	132	86158143	-	Adeh_1718	-	hypothetical protein
1714	 77.13	0	1971935..1972861	-	308	86158144	-	Adeh_1719	-	hypothetical protein
1715	 76.63	0	1973071..1973823	-	250	86158145	-	Adeh_1720	-	molybdopterin binding domain-containing protein
1716	 78.84	0	1973866..1974522	-	218	86158146	-	Adeh_1721	-	thymidylate kinase
1717	 74.80	0	1974519..1974899	-	126	86158147	-	Adeh_1722	-	hypothetical protein
1718	 73.07	0	1974911..1976269	-	452	86158148	-	Adeh_1723	-	L-threonine synthase
1719	 72.64	0	1976272..1977477	-	401	86158149	-	Adeh_1724	-	aminotransferase
1720	 79.46	+1	1977528..1978082	-	184	86158150	-	Adeh_1725	-	hypothetical protein
1721	 75.87	0	1978093..1978722	-	209	86158151	-	Adeh_1726	-	protein-L-isoaspartate O-methyltransferase
1722	 76.67	0	1978808..1981126	-	772	86158152	-	Adeh_1727	-	ATP-dependent DNA helicase RecG
1723	 68.26	-1	1981538..1982038	-	166	86158153	-	Adeh_1728	-	GreA/GreB family elongation factor
1724	 71.15	0	1982166..1985399	-	1077	86158154	carB	Adeh_1729	-	carbamoyl phosphate synthase large subunit
1725	 77.91	0	1985535..1986032	-	165	86158155	-	Adeh_1730	-	cyclic nucleotide-binding domain-containing protein
1726	 68.50	-1	1986087..1987289	-	400	86158156	-	Adeh_1731	-	L-aspartate aminotransferase
1727	 67.68	-1	1987437..1987931	-	164	86158157	-	Adeh_1732	-	coenzyme A biosynthesis protein, cytidyltransferase-related
1728	 77.78	0	1987951..1988490	-	179	86158158	-	Adeh_1733	-	hypothetical protein
1729	 81.18	+1	1988487..1989416	-	309	86158159	-	Adeh_1734	-	hypothetical protein
1730	 72.89	0	1989473..1990501	-	342	86158160	-	Adeh_1735	-	cation diffusion facilitator family transporter
1731	 76.74	0	1990629..1991591	+	320	86158161	-	Adeh_1736	-	Alpha/beta hydrolase fold-1
1732	 76.45	0	1991588..1994653	+	1021	86158162	-	Adeh_1737	-	WD-40-like beta propeller repeat-containing protein
1733	 77.87	0	1994650..1996398	-	582	86158163	-	Adeh_1738	-	HNH nuclease
1734	 67.50	-1	1997218..1998294	+	358	86158164	-	Adeh_1739	-	hypothetical protein
1735	 67.80	-1	1998278..1998718	+	146	86158165	-	Adeh_1740	-	hypothetical protein
1736	 68.10	-1	1998747..2000210	+	487	86158166	-	Adeh_1741	-	hypothetical protein
1737	 68.92	-1	2000706..2001104	-	132	86158167	-	Adeh_1742	-	hypothetical protein
1738	 73.63	0	2001280..2001552	-	90	86158168	-	Adeh_1743	-	LysR family transcriptional regulator
1739	 74.13	0	2001679..2002428	+	249	86158169	-	Adeh_1744	-	methionine aminopeptidase, type I
1740	 78.93	0	2002558..2003079	+	173	86158170	-	Adeh_1745	-	hypothetical protein
1741	 79.70	+1	2003104..2003778	-	224	86158171	-	Adeh_1746	-	hypothetical protein
1742	 77.25	0	2003775..2004473	-	232	86158172	-	Adeh_1747	-	sigma-24 (FecI-like)
1743	 76.72	0	2004598..2004975	-	125	86158173	-	Adeh_1748	-	hypothetical protein
1744	 76.66	0	2005119..2006609	+	496	86158174	-	Adeh_1749	-	Beta-lactamase
1745	 75.81	0	2006659..2007183	+	174	86158175	-	Adeh_1750	-	hypothetical protein
1746	 76.79	0	2007185..2007658	+	157	86158176	-	Adeh_1751	-	hypothetical protein
1747	 72.01	0	2007734..2008351	-	205	86158177	-	Adeh_1752	-	hypothetical protein
1748	 70.81	0	2008499..2008957	+	152	86158178	-	Adeh_1753	-	GCN5-related N-acetyltransferase
1749	 70.90	0	2009077..2009478	+	133	86158179	-	Adeh_1754	-	globin like protein
1750	 70.92	0	2009592..2010626	-	344	86158180	-	Adeh_1755	-	outer membrane protein (porin)
1751	 71.29	0	2010664..2012025	-	453	86158181	-	Adeh_1756	-	anaerobic C4-dicarboxylate transporter
1752	 69.77	-1	2012038..2013486	-	482	86158182	aspA	Adeh_1757	-	aspartate ammonia-lyase
1753	 73.83	0	2013726..2015162	-	478	86158183	-	Adeh_1758	-	two component, sigma54 specific, Fis family transcriptional regulator
74.55	MEAN

4.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.