IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.55   STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1425	 80.24	+1	1645664..1646164	+	166	86157855	-	Adeh_1430	-	hypothetical protein
1426	 74.75	0	1646186..1647706	-	506	86157856	-	Adeh_1431	-	hypothetical protein
1427	 77.52	0	1647999..1649021	+	340	86157857	-	Adeh_1432	-	D-cysteine desulfhydrase
1428	 74.10	0	1649139..1649528	+	129	86157858	-	Adeh_1433	-	ACT domain-containing protein
1429	 75.73	0	1649575..1650777	+	400	86157859	-	Adeh_1434	-	patatin
1430	 77.03	0	1650763..1651746	-	327	86157860	-	Adeh_1435	-	hypothetical protein
1431	 70.82	0	1651810..1652940	-	376	86157861	-	Adeh_1436	-	homocitrate synthase
1432	 73.37	0	1652945..1657327	-	1460	86157862	-	Adeh_1437	-	AMP-dependent synthetase and ligase
1433	 77.30	0	1657785..1658771	+	328	86157863	-	Adeh_1438	-	6-phosphogluconate dehydrogenase-like protein
1434	 72.42	0	1658768..1660279	+	503	86157864	-	Adeh_1439	-	glucose-6-phosphate 1-dehydrogenase
1435	 81.69	+1	1660285..1661016	+	243	86157865	-	Adeh_1440	-	6-phosphogluconolactonase
1436	 74.98	0	1661171..1663444	+	757	86157866	-	Adeh_1441	-	Alpha,alpha-trehalose-phosphate synthase (UDP-forming)
1437	 76.37	0	1663467..1665269	-	600	86157867	-	Adeh_1442	-	glycoside hydrolase 15-related
1438	 78.14	0	1665417..1667333	-	638	86157868	-	Adeh_1443	-	Cl- channel, voltage gated
1439	 73.33	0	1667424..1667888	+	154	86157869	-	Adeh_1444	-	LuxR family transcriptional regulator
1440	 75.26	0	1668080..1668568	+	162	86157870	-	Adeh_1445	-	universal stress protein UspA
1441	 80.25	+1	1668645..1669115	+	156	86157871	-	Adeh_1446	-	universal stress protein UspA
1442	 77.32	0	1669146..1671566	-	806	86157872	-	Adeh_1447	-	ATP-dependent protease, putative
1443	 75.15	0	1671749..1672243	+	164	86157873	-	Adeh_1448	-	universal stress protein UspA
1444	 74.46	0	1672264..1672725	+	153	86157874	-	Adeh_1449	-	signal transduction protein
1445	 75.50	0	1672766..1674112	-	448	86157875	-	Adeh_1450	-	two component, sigma54 specific, Fis family transcriptional regulator
1446	 75.71	0	1674087..1675502	-	471	86157876	-	Adeh_1451	-	periplasmic sensor signal transduction histidine kinase
1447	 73.46	0	1675626..1676435	+	269	86157877	-	Adeh_1452	-	metallophosphoesterase
1448	 73.83	0	1676429..1677070	+	213	86157878	-	Adeh_1453	-	hypothetical protein
1449	 75.82	0	1677191..1678960	+	589	86157879	-	Adeh_1454	-	hypothetical protein
1450	 79.06	0	1679027..1679623	-	198	86157880	-	Adeh_1455	-	pyridoxamine 5'-phosphate oxidase
1451	 68.60	-1	1679747..1680418	+	223	86157881	-	Adeh_1456	-	hypothetical protein
1452	 77.61	0	1680510..1681094	-	194	86157882	-	Adeh_1457	-	DNA-binding cold-shock protein
1453	 73.50	0	1681308..1681790	+	160	86157883	-	Adeh_1458	-	hypothetical protein
1454	 75.38	0	1681850..1682848	+	332	86157884	-	Adeh_1459	-	hypothetical protein
1455	 78.04	0	1682940..1683827	+	295	86157885	-	Adeh_1460	-	methyltransferase type 11
1456	 74.91	0	1684214..1684492	+	92	86157886	-	Adeh_1461	-	YciI-like protein
1457	 68.38	-1	1684675..1685838	-	387	86157887	-	Adeh_1462	-	Phage integrase
1458	 72.52	0	1685901..1686122	-	73	86157888	-	Adeh_1463	-	DNA-binding excisionase/Xis
1459	 71.53	0	1686119..1687063	-	314	86157889	-	Adeh_1464	-	hypothetical protein
1460	 68.92	-1	1687255..1687653	-	132	86157890	-	Adeh_1465	-	hypothetical protein
1461	 71.24	0	1688496..1688801	+	101	86157891	-	Adeh_1466	-	hypothetical protein
1462	 72.42	0	1688951..1689541	+	196	86157892	-	Adeh_1467	-	resolvase-like protein
1463	 69.15	-1	1689557..1690039	-	160	86157893	-	Adeh_1468	-	hypothetical protein
1464	 66.17	-1	1690120..1690524	+	134	86157894	-	Adeh_1469	-	hypothetical protein
1465	 68.05	-1	1690568..1691365	-	265	86157895	-	Adeh_1470	-	hypothetical protein
1466	 68.63	-1	1691373..1692188	-	271	86157896	-	Adeh_1471	-	hypothetical protein
1467	 65.92	-1	1692377..1693444	-	355	86157897	-	Adeh_1472	-	hypothetical protein
1468	 75.73	0	1694225..1697479	+	1084	86157898	-	Adeh_1473	-	PAS/PAC sensor signal transduction histidine kinase
1469	 75.49	0	1697513..1698079	-	188	86157899	-	Adeh_1474	-	TetR family transcriptional regulator
1470	 79.13	+1	1698358..1699464	+	368	86157900	-	Adeh_1475	-	secretion protein HlyD
1471	 72.95	0	1699477..1702563	+	1028	86157901	-	Adeh_1476	-	acriflavin resistance protein
1472	 79.27	+1	1702590..1703954	+	454	86157902	-	Adeh_1477	-	outer membrane efflux protein
1473	 78.76	0	1703997..1705013	+	338	86157903	-	Adeh_1478	-	Fis family transcriptional regulator
1474	 74.68	0	1705880..1706191	+	103	86157904	-	Adeh_1479	-	hypothetical protein
1475	 78.18	0	1706191..1707501	+	436	86157905	-	Adeh_1480	-	polynucleotide adenylyltransferase region
1476	 76.93	0	1707519..1708775	+	418	86157906	-	Adeh_1481	-	response regulator receiver sensor signal transduction histidine kinase
1477	 77.94	0	1708819..1709874	+	351	86157907	-	Adeh_1482	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
1478	 71.75	0	1709972..1711546	+	524	86157908	-	Adeh_1483	-	beta-lysine 5,6-aminomutase alpha subunit / D-lysine 5,6-aminomutase alpha subunit
1479	 78.51	0	1711543..1712091	+	182	86157909	-	Adeh_1484	-	hypothetical protein
1480	 72.14	0	1712088..1712855	+	255	86157910	-	Adeh_1485	-	D-lysine 5,6-aminomutase beta subunit / beta-lysine 5,6-aminomutase beta subunit
1481	 72.73	0	1712855..1713250	+	131	86157911	-	Adeh_1486	-	3-aminobutyryl-CoA ammonia-lyase
1482	 74.24	0	1713296..1714114	+	272	86157912	-	Adeh_1487	-	3-keto-5-aminohexanoate cleavage enzyme
1483	 67.40	-1	1714219..1714491	+	90	86157913	-	Adeh_1488	-	histone-like DNA-binding protein
1484	 75.46	0	1714505..1714993	+	162	86157914	-	Adeh_1489	-	hypothetical protein
1485	 70.07	0	1715077..1715841	-	254	86157915	-	Adeh_1490	-	hypothetical protein
1486	 75.78	0	1716100..1717470	-	456	86157916	-	Adeh_1491	-	ammonium transporter
1487	 82.91	+1	1717653..1718951	-	432	86157917	-	Adeh_1492	-	hypothetical protein
1488	 67.13	-1	1719096..1719311	-	71	86157918	-	Adeh_1493	-	hypothetical protein
1489	 81.34	+1	1719818..1721173	+	451	86157919	-	Adeh_1494	-	tRNA(Ile)-lysidine synthetase-like
1490	 68.19	-1	1721295..1723202	+	635	86157920	-	Adeh_1495	-	FtsH peptidase
1491	 78.05	0	1723252..1724103	+	283	86157921	-	Adeh_1496	-	dihydropteroate synthase
1492	 75.40	0	1724125..1725006	+	293	86157922	-	Adeh_1497	-	hypothetical protein
1493	 76.67	0	1724993..1725382	+	129	86157923	-	Adeh_1498	-	hypothetical protein
1494	 72.69	0	1725509..1726885	+	458	86157924	-	Adeh_1499	-	phosphoglucosamine mutase
1495	 72.15	0	1726972..1727700	+	242	86157925	-	Adeh_1500	-	pyridoxal phosphate biosynthetic protein PdxJ
1496	 78.81	0	1727734..1728120	+	128	86157926	-	Adeh_1501	-	holo-(acyl-carrier-protein) synthase
1497	 81.05	+1	1728117..1729646	+	509	86157927	-	Adeh_1502	-	hypothetical protein
1498	 81.13	+1	1729634..1730200	+	188	86157928	-	Adeh_1503	-	hypothetical protein
1499	 75.11	0	1730197..1730658	-	153	86157929	-	Adeh_1504	-	hypothetical protein
1500	 75.97	0	1730823..1731596	-	257	86157930	-	Adeh_1505	-	glutamine amidotransferase, class-II
1501	 80.08	+1	1731687..1732208	-	173	86157931	-	Adeh_1506	-	hypothetical protein
1502	 77.80	0	1732218..1733483	-	421	86157932	-	Adeh_1507	-	imidazolonepropionase
1503	 74.65	0	1733480..1735120	-	546	86157933	-	Adeh_1508	-	urocanate hydratase
1504	 76.52	0	1735145..1736068	+	307	86157934	-	Adeh_1509	-	phosphatidylserine decarboxylase
1505	 72.91	0	1736102..1737382	+	426	86157935	-	Adeh_1510	-	histidyl-tRNA synthetase
1506	 84.24	+2	1737388..1737939	+	183	86157936	-	Adeh_1511	-	hypothetical protein
1507	 78.56	0	1737939..1738838	+	299	86157937	-	Adeh_1512	-	tRNA delta(2)-isopentenylpyrophosphate transferase
1508	 69.56	-1	1738893..1739861	+	322	86157938	-	Adeh_1513	-	acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
1509	 81.93	+1	1739845..1740237	-	130	86157939	-	Adeh_1514	-	hypothetical protein
1510	 77.29	0	1740336..1741088	+	250	86157940	-	Adeh_1515	-	cytidylate kinase
1511	 74.09	0	1741120..1741779	+	219	86157941	-	Adeh_1516	-	LigA
1512	 82.72	+1	1741967..1742776	+	269	86157942	-	Adeh_1517	-	LigA
1513	 77.88	0	1742770..1744098	-	442	86157943	-	Adeh_1518	-	putative esterase
1514	 71.76	0	1744180..1745082	+	300	86157944	-	Adeh_1519	-	hydroxymethylbutenyl pyrophosphate reductase
1515	 66.08	-1	1745301..1747007	+	568	86157945	rpsA	Adeh_1520	-	30S ribosomal protein S1
1516	 72.45	0	1747311..1748261	+	316	86157946	-	Adeh_1521	-	signal peptide peptidase A
1517	 73.29	0	1748286..1748783	+	165	86157947	-	Adeh_1522	-	histidine triad (HIT) protein
1518	 81.26	+1	1748780..1749889	+	369	86157948	-	Adeh_1523	-	TPR repeat-containing protein
1519	 72.01	0	1749959..1751755	+	598	86157949	-	Adeh_1524	-	arginyl-tRNA synthetase
1520	 79.42	+1	1751827..1752555	+	242	86157950	-	Adeh_1525	-	sporulation related protein
1521	 68.35	-1	1752585..1752941	+	118	86157951	-	Adeh_1526	-	cupin domain-containing protein
1522	 76.34	0	1753054..1753332	-	92	86157952	-	Adeh_1527	-	hypothetical protein
1523	 76.71	0	1753329..1754921	-	530	86157953	-	Adeh_1528	-	FAD dependent oxidoreductase
1524	 66.23	-1	1755151..1755381	+	76	86157954	-	Adeh_1529	-	hypothetical protein
74.55	MEAN

4.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.