IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1018	 74.79	0	1180968..1182062	-	364	86157448	-	Adeh_1021	-	linoleoyl-CoA desaturase
1019	 77.44	0	1182170..1183069	-	299	86157449	-	Adeh_1022	-	tyrosine phosphatase
1020	 69.63	-1	1183066..1184211	-	381	86157450	-	Adeh_1023	-	arsenical-resistance protein
1021	 73.22	0	1184221..1184571	-	116	86157451	-	Adeh_1024	-	ArsR family transcriptional regulator
1022	 74.36	0	1184736..1185125	+	129	86157452	-	Adeh_1025	-	thioredoxin-related
1023	 76.82	0	1185135..1185833	+	232	86157453	-	Adeh_1026	-	cytochrome c biogenesis protein, transmembrane region
1024	 71.12	0	1185856..1186956	+	366	86157454	-	Adeh_1027	-	transporter
1025	 69.23	-1	1186995..1187228	+	77	86157455	-	Adeh_1028	-	redox-active disulfide protein 2
1026	 74.57	0	1187246..1187878	+	210	86157456	-	Adeh_1029	-	methyltransferase type 11
1027	 71.73	0	1188007..1188618	+	203	86157457	-	Adeh_1030	-	isochorismatase hydrolase
1028	 68.44	-1	1188627..1189076	+	149	86157458	-	Adeh_1031	-	MarR family transcriptional regulator
1029	 72.02	0	1189282..1190196	+	304	86157459	-	Adeh_1032	-	hypothetical protein
1030	 78.22	0	1190196..1190792	+	198	86157460	-	Adeh_1033	-	rhomboid-like protein
1031	 76.71	0	1190728..1191633	-	301	86157461	-	Adeh_1034	-	LysR family transcriptional regulator
1032	 69.37	-1	1191764..1192207	+	147	86157462	-	Adeh_1035	-	hypothetical protein
1033	 65.92	-1	1192938..1193606	+	222	86157463	-	Adeh_1036	-	hypothetical protein
1034	 71.62	0	1193693..1194379	+	228	86157464	-	Adeh_1037	-	hypothetical protein
1035	 75.32	0	1194513..1194974	+	153	86157465	-	Adeh_1038	-	hypothetical protein
1036	 74.47	0	1195467..1196312	+	281	86157466	-	Adeh_1039	-	DNA polymerase III subunit tau
1037	 73.12	0	1197051..1197608	-	185	86157467	-	Adeh_1040	-	isochorismatase hydrolase
1038	 67.00	-1	1197722..1198024	-	100	86157468	-	Adeh_1041	-	4Fe-4S ferredoxin, iron-sulfur binding protein
1039	 67.20	-1	1198217..1198402	-	61	86157469	-	Adeh_1042	-	4Fe-4S ferredoxin, iron-sulfur binding protein
1040	 74.50	0	1199007..1199810	+	267	86157470	-	Adeh_1043	-	ribosomal RNA methyltransferase RrmJ/FtsJ
1041	 71.34	0	1199868..1201130	+	420	86157471	-	Adeh_1044	-	tyrosyl-tRNA synthetase
1042	 71.97	0	1201162..1201953	-	263	86157472	-	Adeh_1045	-	metallophosphoesterase
1043	 78.22	0	1201988..1202584	-	198	86157473	-	Adeh_1046	-	5-formyltetrahydrofolate cyclo-ligase
1044	 77.85	0	1203106..1204017	+	303	86157474	-	Adeh_1047	-	serine/threonine protein kinase
1045	 80.10	+1	1204025..1205170	-	381	86157475	-	Adeh_1048	-	aminotransferase, class V
1046	 71.45	0	1205205..1206311	-	368	86157476	-	Adeh_1049	-	phosphoesterase, RecJ-like
1047	 71.98	0	1206326..1207153	-	275	86157477	-	Adeh_1050	-	endonuclease IV
1048	 68.50	-1	1207356..1208120	-	254	86157478	-	Adeh_1051	-	filamentation induced by cAMP protein Fic
1049	 70.38	0	1208440..1209354	-	304	86157479	-	Adeh_1052	-	branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase
1050	 75.45	0	1209457..1210902	-	481	86157480	-	Adeh_1053	-	patatin
1051	 76.06	0	1210978..1214022	-	1014	86157481	-	Adeh_1054	-	glutamate-ammonia-ligase adenylyltransferase
1052	 72.68	0	1214551..1215996	-	481	86157482	-	Adeh_1055	-	two component, sigma54 specific, Fis family transcriptional regulator
1053	 72.88	0	1216067..1218205	-	712	86157483	-	Adeh_1056	-	glycogen debranching enzyme GlgX
1054	 72.98	0	1218294..1219607	-	437	86157484	-	Adeh_1057	-	UDP-glucose 6-dehydrogenase
1055	 78.33	0	1219624..1220772	-	382	86157485	-	Adeh_1058	-	hypothetical protein
1056	 77.84	0	1220769..1221896	-	375	86157486	-	Adeh_1059	-	hypothetical protein
1057	 75.07	0	1222135..1223253	+	372	86157487	-	Adeh_1060	-	NAD-dependent epimerase/dehydratase
1058	 75.17	0	1223250..1224308	+	352	86157488	-	Adeh_1061	-	NAD-dependent epimerase/dehydratase
1059	 78.12	0	1224309..1225268	+	319	86157489	-	Adeh_1062	-	zinc-binding alcohol dehydrogenase
1060	 77.42	0	1225265..1226278	+	337	86157490	-	Adeh_1063	-	oxidoreductase-like protein
1061	 81.57	+1	1226285..1227418	+	377	86157491	-	Adeh_1064	-	glycosyl transferase, group 1
1062	 77.16	0	1227415..1228500	+	361	86157492	-	Adeh_1065	-	hypothetical protein
1063	 75.19	0	1228497..1229576	+	359	86157493	-	Adeh_1066	-	hypothetical protein
1064	 73.95	0	1229661..1231472	+	603	86157494	-	Adeh_1067	-	ABC transporter, fused ATPase and inner membrane subunits
1065	 72.00	0	1231600..1232424	-	274	86157495	-	Adeh_1068	-	Beta-lactamase-like
1066	 70.99	0	1232798..1233700	+	300	86157496	-	Adeh_1069	-	RNA polymerase, sigma 32 subunit, RpoH
1067	 74.64	0	1233774..1234538	-	254	86157497	-	Adeh_1070	-	short-chain dehydrogenase/reductase SDR
1068	 75.75	0	1234549..1236045	-	498	86157498	-	Adeh_1071	-	periplasmic sensor signal transduction histidine kinase
1069	 78.79	0	1236123..1236815	-	230	86157499	-	Adeh_1072	-	hypothetical protein
1070	 75.71	0	1236812..1238227	-	471	86157500	-	Adeh_1073	-	surface antigen (D15)
1071	 79.56	+1	1238320..1240281	-	653	86157501	-	Adeh_1074	-	serine/threonine protein kinase
1072	 81.10	+1	1240449..1241792	+	447	86157502	-	Adeh_1075	-	hypothetical protein
1073	 70.68	0	1241793..1243388	+	531	86157503	-	Adeh_1076	-	glycoside hydrolase family protein
1074	 74.47	0	1243523..1244611	+	362	86157504	-	Adeh_1077	-	hypothetical protein
1075	 72.31	0	1244807..1246348	+	513	86157505	-	Adeh_1078	-	lysyl-tRNA synthetase
1076	 74.09	0	1246351..1248318	+	655	86157506	-	Adeh_1079	-	hypothetical protein
1077	 73.30	0	1248362..1248934	-	190	86157507	-	Adeh_1080	-	hypothetical protein
1078	 66.42	-1	1249058..1251478	+	806	86157508	-	Adeh_1081	-	surface antigen (D15)
1079	 67.36	-1	1251497..1252075	+	192	86157509	-	Adeh_1082	-	outer membrane chaperone Skp (OmpH)
1080	 73.43	0	1252084..1253148	+	354	86157510	-	Adeh_1083	-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
1081	 70.49	0	1253145..1253615	+	156	86157511	-	Adeh_1084	-	3-hydroxyacyl-[acyl-carrier-protein] dehydratase
1082	 71.83	0	1253641..1254414	+	257	86157512	-	Adeh_1085	-	acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
1083	 74.60	0	1254417..1255223	+	268	86157513	-	Adeh_1086	-	hypothetical protein
1084	 80.56	+1	1255223..1255510	+	95	86157514	-	Adeh_1087	-	hypothetical protein
1085	 71.70	0	1255644..1256696	+	350	86157515	-	Adeh_1088	-	uroporphyrinogen decarboxylase
1086	 69.43	-1	1256707..1258083	+	458	86157516	-	Adeh_1089	-	coproporphyrinogen III oxidase
1087	 73.62	0	1258119..1259081	+	320	86157517	-	Adeh_1090	-	ferrochelatase
1088	 78.70	0	1259333..1261102	-	589	86157518	-	Adeh_1091	-	heat shock protein DnaJ-like
1089	 77.19	0	1261307..1262095	+	262	86157519	-	Adeh_1092	-	trehalose-phosphatase
1090	 78.39	0	1262287..1263711	+	474	86157520	-	Adeh_1093	-	exodeoxyribonuclease VII large subunit
1091	 74.47	0	1263734..1264015	+	93	86157521	-	Adeh_1094	-	exodeoxyribonuclease VII small subunit
1092	 68.82	-1	1264020..1264436	+	138	86157522	-	Adeh_1095	-	response regulator receiver domain-containing protein
1093	 77.89	0	1264514..1265395	+	293	86157523	-	Adeh_1096	-	farnesyl-diphosphate synthase
1094	 72.37	0	1265414..1267324	+	636	86157524	-	Adeh_1097	-	1-deoxy-D-xylulose-5-phosphate synthase
1095	 75.57	0	1267492..1268232	+	246	86157525	-	Adeh_1098	-	hemolysin A
1096	 71.71	0	1268456..1268971	+	171	86157526	-	Adeh_1099	-	hypothetical protein
1097	 69.47	-1	1268975..1270648	+	557	86157527	-	Adeh_1100	-	NusA antitermination factor
1098	 72.73	0	1270645..1270908	+	87	86157528	-	Adeh_1101	-	hypothetical protein
1099	 72.52	0	1270920..1273772	+	950	86157529	-	Adeh_1102	-	translation initiation factor 2
1100	 71.71	0	1273891..1274346	+	151	86157530	-	Adeh_1103	-	hypothetical protein
1101	 74.58	0	1274343..1274759	+	138	86157531	-	Adeh_1104	-	ribosome-binding factor A
1102	 80.15	+1	1274767..1275708	+	313	86157532	-	Adeh_1105	-	tRNA pseudouridine synthase B
1103	 64.44	-2	1275818..1276087	+	89	86157533	-	Adeh_1106	-	SSU ribosomal protein S15P
1104	 69.56	-1	1276277..1278526	+	749	86157534	-	Adeh_1107	-	polynucleotide phosphorylase/polyadenylase
1105	 77.25	0	1278552..1278995	+	147	86157535	-	Adeh_1108	-	deoxyuridine 5'-triphosphate nucleotidohydrolase
1106	 71.89	0	1279011..1280330	+	439	86157536	-	Adeh_1109	-	adenylosuccinate lyase
1107	 82.67	+1	1280357..1280887	+	176	86157537	-	Adeh_1110	-	hypothetical protein
1108	 78.38	0	1280903..1282294	-	463	86157538	-	Adeh_1111	-	GAF sensor signal transduction histidine kinase
1109	 69.06	-1	1282819..1283778	-	319	86157539	-	Adeh_1112	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
1110	 78.02	0	1283808..1284617	+	269	86157540	-	Adeh_1113	-	tRNA/rRNA methyltransferase, SpoU
1111	 66.67	-1	1284614..1284910	-	98	86157541	-	Adeh_1114	-	hypothetical protein
1112	 74.63	0	1284978..1285982	-	334	86157542	-	Adeh_1115	-	peptidase S1 and S6, chymotrypsin/Hap
1113	 80.46	+1	1286364..1286798	-	144	86157543	-	Adeh_1116	-	hypothetical protein
1114	 78.41	0	1286786..1287415	-	209	86157544	-	Adeh_1117	-	phosphoglycolate phosphatase
1115	 77.36	0	1287446..1288399	-	317	86157545	-	Adeh_1118	-	metal dependent phosphohydrolase
1116	 77.51	0	1288396..1288773	-	125	86157546	-	Adeh_1119	-	response regulator receiver domain-containing protein
1117	 77.06	0	1288752..1289405	-	217	86157547	-	Adeh_1120	-	molybdopterin synthase subunit MoaE / molybdopterin synthase subunit MoaD
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.