IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 74.55 STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
977	 78.07	0	1128688..1129380	-	230	86157407	-	Adeh_0980	-	putative signal peptide protein
978	 74.08	0	1129384..1130799	-	471	86157408	-	Adeh_0981	-	alkaline phosphatase
979	 75.26	0	1130826..1132268	-	480	86157409	-	Adeh_0982	-	alkaline phosphatase
980	 77.38	0	1132391..1133725	+	444	86157410	-	Adeh_0983	-	histidine kinase
981	 75.00	0	1133722..1134141	+	139	86157411	-	Adeh_0984	-	response regulator receiver domain-containing protein
982	 75.31	0	1134195..1135664	+	489	86157412	-	Adeh_0985	-	peptidase M48, Ste24p
983	 74.84	0	1135770..1136075	+	101	86157413	-	Adeh_0986	-	zinc finger, UBP-type
984	 78.19	0	1136282..1136689	+	135	86157414	-	Adeh_0987	-	hypothetical protein
985	 66.18	-1	1136826..1137029	-	67	86157415	-	Adeh_0988	-	cold-shock DNA-binding protein family protein
986	 77.06	0	1137295..1138218	+	307	86157416	-	Adeh_0989	-	metallophosphoesterase
987	 80.87	+1	1138215..1140917	+	900	86157417	-	Adeh_0990	-	phospholipase D/transphosphatidylase
988	 74.64	0	1140945..1143227	-	760	86157418	-	Adeh_0991	-	hypothetical protein
989	 75.61	0	1143318..1146257	-	979	86157419	-	Adeh_0992	-	putative Vgr-related protein
990	 76.74	0	1146470..1146886	-	138	86157420	-	Adeh_0993	-	hypothetical protein
991	 73.96	0	1147031..1149649	+	872	86157421	-	Adeh_0994	-	hypothetical protein
992	 76.46	0	1149870..1150349	-	159	86157422	-	Adeh_0995	-	CoA-binding protein
993	 77.81	0	1150564..1151505	+	313	86157423	-	Adeh_0996	-	hypothetical protein
994	 78.22	0	1151536..1152729	-	397	86157424	-	Adeh_0997	-	hypothetical protein
995	 77.90	0	1152793..1153887	-	364	86157425	-	Adeh_0998	-	tungstate/molybdate transport system ATP-binding protein
996	 74.52	0	1153872..1154546	-	224	86157426	-	Adeh_0999	-	molybdate ABC transporter, inner membrane subunit
997	 77.91	0	1154549..1155331	-	260	86157427	-	Adeh_1000	-	molybdenum ABC transporter, periplasmic molybdate-binding protein
998	 79.61	+1	1155461..1156333	+	290	86157428	-	Adeh_1001	-	DNA-binding excisionase/Xis
999	 69.31	-1	1156424..1157557	-	377	86157429	-	Adeh_1002	-	basic membrane lipoprotein
1000	 73.94	0	1157617..1158537	-	306	86157430	-	Adeh_1003	-	ABC transporter, inner membrane subunit
1001	 72.91	0	1158534..1159622	-	362	86157431	-	Adeh_1004	-	ABC transporter, inner membrane subunit
1002	 74.98	0	1159619..1161157	-	512	86157432	-	Adeh_1005	-	ABC transporter, ATPase subunit
1003	 71.60	0	1161168..1161734	-	188	86157433	-	Adeh_1006	-	xanthine-guanine phosphoribosyltransferase
1004	 69.62	-1	1161814..1162185	-	123	86157434	-	Adeh_1007	-	DGPFAETKE domain-containing protein
1005	 76.45	0	1162509..1163009	-	166	86157435	-	Adeh_1008	-	hypothetical protein
1006	 76.03	0	1163220..1164575	+	451	86157436	-	Adeh_1009	-	hypothetical protein
1007	 73.42	0	1164588..1165253	-	221	86157437	-	Adeh_1010	-	bifunctional deaminase-reductase-like
1008	 76.46	0	1165439..1167133	-	564	86157438	-	Adeh_1011	-	hypothetical protein
1009	 67.93	-1	1167292..1168164	+	290	86157439	-	Adeh_1012	-	hypothetical protein
1010	 78.73	0	1168192..1168929	-	245	86157440	-	Adeh_1013	-	hypothetical protein
1011	 76.97	0	1168984..1169886	+	300	86157441	-	Adeh_1014	-	NmrA-like
1012	 76.72	0	1169907..1171667	-	586	86157442	-	Adeh_1015	-	thiamine pyrophosphate enzyme
1013	 80.34	+1	1171848..1173917	-	689	86157443	-	Adeh_1016	-	glycosyl transferase, group 1
1014	 78.86	0	1173908..1174858	-	316	86157444	-	Adeh_1017	-	LmbE-like protein
1015	 78.84	0	1175261..1176484	+	407	86157445	-	Adeh_1018	-	outer membrane efflux protein
1016	 75.35	0	1176481..1177851	+	456	86157446	-	Adeh_1019	-	secretion protein HlyD
1017	 72.04	0	1177863..1180931	+	1022	86157447	-	Adeh_1020	-	heavy metal efflux pump CzcA
1018	 74.79	0	1180968..1182062	-	364	86157448	-	Adeh_1021	-	linoleoyl-CoA desaturase
1019	 77.44	0	1182170..1183069	-	299	86157449	-	Adeh_1022	-	tyrosine phosphatase
1020	 69.63	-1	1183066..1184211	-	381	86157450	-	Adeh_1023	-	arsenical-resistance protein
1021	 73.22	0	1184221..1184571	-	116	86157451	-	Adeh_1024	-	ArsR family transcriptional regulator
1022	 74.36	0	1184736..1185125	+	129	86157452	-	Adeh_1025	-	thioredoxin-related
1023	 76.82	0	1185135..1185833	+	232	86157453	-	Adeh_1026	-	cytochrome c biogenesis protein, transmembrane region
1024	 71.12	0	1185856..1186956	+	366	86157454	-	Adeh_1027	-	transporter
1025	 69.23	-1	1186995..1187228	+	77	86157455	-	Adeh_1028	-	redox-active disulfide protein 2
1026	 74.57	0	1187246..1187878	+	210	86157456	-	Adeh_1029	-	methyltransferase type 11
1027	 71.73	0	1188007..1188618	+	203	86157457	-	Adeh_1030	-	isochorismatase hydrolase
1028	 68.44	-1	1188627..1189076	+	149	86157458	-	Adeh_1031	-	MarR family transcriptional regulator
1029	 72.02	0	1189282..1190196	+	304	86157459	-	Adeh_1032	-	hypothetical protein
1030	 78.22	0	1190196..1190792	+	198	86157460	-	Adeh_1033	-	rhomboid-like protein
1031	 76.71	0	1190728..1191633	-	301	86157461	-	Adeh_1034	-	LysR family transcriptional regulator
1032	 69.37	-1	1191764..1192207	+	147	86157462	-	Adeh_1035	-	hypothetical protein
1033	 65.92	-1	1192938..1193606	+	222	86157463	-	Adeh_1036	-	hypothetical protein
1034	 71.62	0	1193693..1194379	+	228	86157464	-	Adeh_1037	-	hypothetical protein
1035	 75.32	0	1194513..1194974	+	153	86157465	-	Adeh_1038	-	hypothetical protein
1036	 74.47	0	1195467..1196312	+	281	86157466	-	Adeh_1039	-	DNA polymerase III subunit tau
1037	 73.12	0	1197051..1197608	-	185	86157467	-	Adeh_1040	-	isochorismatase hydrolase
1038	 67.00	-1	1197722..1198024	-	100	86157468	-	Adeh_1041	-	4Fe-4S ferredoxin, iron-sulfur binding protein
1039	 67.20	-1	1198217..1198402	-	61	86157469	-	Adeh_1042	-	4Fe-4S ferredoxin, iron-sulfur binding protein
1040	 74.50	0	1199007..1199810	+	267	86157470	-	Adeh_1043	-	ribosomal RNA methyltransferase RrmJ/FtsJ
1041	 71.34	0	1199868..1201130	+	420	86157471	-	Adeh_1044	-	tyrosyl-tRNA synthetase
1042	 71.97	0	1201162..1201953	-	263	86157472	-	Adeh_1045	-	metallophosphoesterase
1043	 78.22	0	1201988..1202584	-	198	86157473	-	Adeh_1046	-	5-formyltetrahydrofolate cyclo-ligase
1044	 77.85	0	1203106..1204017	+	303	86157474	-	Adeh_1047	-	serine/threonine protein kinase
1045	 80.10	+1	1204025..1205170	-	381	86157475	-	Adeh_1048	-	aminotransferase, class V
1046	 71.45	0	1205205..1206311	-	368	86157476	-	Adeh_1049	-	phosphoesterase, RecJ-like
1047	 71.98	0	1206326..1207153	-	275	86157477	-	Adeh_1050	-	endonuclease IV
1048	 68.50	-1	1207356..1208120	-	254	86157478	-	Adeh_1051	-	filamentation induced by cAMP protein Fic
1049	 70.38	0	1208440..1209354	-	304	86157479	-	Adeh_1052	-	branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase
1050	 75.45	0	1209457..1210902	-	481	86157480	-	Adeh_1053	-	patatin
1051	 76.06	0	1210978..1214022	-	1014	86157481	-	Adeh_1054	-	glutamate-ammonia-ligase adenylyltransferase
1052	 72.68	0	1214551..1215996	-	481	86157482	-	Adeh_1055	-	two component, sigma54 specific, Fis family transcriptional regulator
1053	 72.88	0	1216067..1218205	-	712	86157483	-	Adeh_1056	-	glycogen debranching enzyme GlgX
1054	 72.98	0	1218294..1219607	-	437	86157484	-	Adeh_1057	-	UDP-glucose 6-dehydrogenase
1055	 78.33	0	1219624..1220772	-	382	86157485	-	Adeh_1058	-	hypothetical protein
1056	 77.84	0	1220769..1221896	-	375	86157486	-	Adeh_1059	-	hypothetical protein
1057	 75.07	0	1222135..1223253	+	372	86157487	-	Adeh_1060	-	NAD-dependent epimerase/dehydratase
1058	 75.17	0	1223250..1224308	+	352	86157488	-	Adeh_1061	-	NAD-dependent epimerase/dehydratase
1059	 78.12	0	1224309..1225268	+	319	86157489	-	Adeh_1062	-	zinc-binding alcohol dehydrogenase
1060	 77.42	0	1225265..1226278	+	337	86157490	-	Adeh_1063	-	oxidoreductase-like protein
1061	 81.57	+1	1226285..1227418	+	377	86157491	-	Adeh_1064	-	glycosyl transferase, group 1
1062	 77.16	0	1227415..1228500	+	361	86157492	-	Adeh_1065	-	hypothetical protein
1063	 75.19	0	1228497..1229576	+	359	86157493	-	Adeh_1066	-	hypothetical protein
1064	 73.95	0	1229661..1231472	+	603	86157494	-	Adeh_1067	-	ABC transporter, fused ATPase and inner membrane subunits
1065	 72.00	0	1231600..1232424	-	274	86157495	-	Adeh_1068	-	Beta-lactamase-like
1066	 70.99	0	1232798..1233700	+	300	86157496	-	Adeh_1069	-	RNA polymerase, sigma 32 subunit, RpoH
1067	 74.64	0	1233774..1234538	-	254	86157497	-	Adeh_1070	-	short-chain dehydrogenase/reductase SDR
1068	 75.75	0	1234549..1236045	-	498	86157498	-	Adeh_1071	-	periplasmic sensor signal transduction histidine kinase
1069	 78.79	0	1236123..1236815	-	230	86157499	-	Adeh_1072	-	hypothetical protein
1070	 75.71	0	1236812..1238227	-	471	86157500	-	Adeh_1073	-	surface antigen (D15)
1071	 79.56	+1	1238320..1240281	-	653	86157501	-	Adeh_1074	-	serine/threonine protein kinase
1072	 81.10	+1	1240449..1241792	+	447	86157502	-	Adeh_1075	-	hypothetical protein
1073	 70.68	0	1241793..1243388	+	531	86157503	-	Adeh_1076	-	glycoside hydrolase family protein
1074	 74.47	0	1243523..1244611	+	362	86157504	-	Adeh_1077	-	hypothetical protein
1075	 72.31	0	1244807..1246348	+	513	86157505	-	Adeh_1078	-	lysyl-tRNA synthetase
1076	 74.09	0	1246351..1248318	+	655	86157506	-	Adeh_1079	-	hypothetical protein
74.55	MEAN

4.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.