version 1.0
Aliivibrio salmonicida LFI1238 chromosome 1, complete genome - 1..3325165 2820 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1342 27.05 -2 1579165..1579944 + 259 209694976 - VSAL_I1460 - HTH-type transcriptional regulator, AraC family 1343 34.04 -1 1581620..1582186 - 188 209694977 - VSAL_I1463 - transposase 1344 35.70 -1 1582204..1582626 - 140 209694978 - VSAL_I1464 - transposase 1345 25.00 -2 1583625..1583840 + 71 209694979 - VSAL_I1465 - hypothetical protein 1346 39.60 0 1583876..1584832 - 318 209694980 - VSAL_I1466 - transposase 1347 37.12 0 1585157..1585579 + 140 209694981 - VSAL_I1467 - hypothetical protein 1348 38.25 0 1585901..1586185 - 94 209694982 - VSAL_I1469 - putative plasmid stabilisation system protein 1349 40.16 0 1586175..1586423 - 82 209694983 - VSAL_I1470 - hypothetical protein 1350 41.19 0 1586716..1587504 + 262 209694984 - VSAL_I1471 - putative antibiotic resistance protein 1351 40.18 0 1587526..1587978 + 150 209694985 - VSAL_I1472 - NUDIX hydrolase 1352 34.93 -1 1588003..1588503 + 166 209694986 - VSAL_I1473 - putative acetyltransferase 1353 36.93 0 1588718..1589356 + 212 209694987 - VSAL_I1475 - outer membrane protein 1354 34.95 -1 1589483..1589914 + 143 209694988 - VSAL_I1476 - membrane protein 1355 35.70 -1 1590020..1590442 + 140 209694989 - VSAL_I1477 - transposase 1356 34.04 -1 1590460..1591026 + 188 209694990 - VSAL_I1478 - transposase 1357 36.52 0 1592512..1592919 + 135 209694991 - VSAL_I1481 - putative lipoprotein 1358 44.89 +1 1592965..1593717 + 250 209694992 - VSAL_I1482 - glucose 1-dehydrogenase 1359 41.03 0 1593892..1594086 + 64 209694993 - VSAL_I1483 - hypothetical protein 1360 39.75 0 1594166..1594882 - 238 209694994 - VSAL_I1484 - short chain dehydrogenase 1361 40.92 0 1595114..1595812 + 232 209694995 - VSAL_I1485 - hypothetical protein 1362 38.61 0 1596113..1596643 + 176 209694996 - VSAL_I1486 - cold-shock protein 1363 45.76 +2 1596738..1597091 + 117 209694997 - VSAL_I1487 - hypothetical protein 1364 37.27 0 1597367..1598788 + 473 209694998 - VSAL_I1488 - hypothetical protein 1365 37.66 0 1599131..1599523 + 130 209694999 - VSAL_I1489 - hypothetical protein 1366 35.65 -1 1599692..1599907 - 71 209695000 - VSAL_I1490 - hypothetical protein 1367 35.70 -1 1600270..1600692 + 140 209695001 - VSAL_I1491 - transposase 1368 34.04 -1 1600710..1601276 + 188 209695002 - VSAL_I1492 - transposase 1369 39.48 0 1604231..1604734 + 167 209695003 - VSAL_I1494 - putative acetyltransferase 1370 37.43 0 1604742..1605449 - 235 209695004 - VSAL_I1495 - hypothetical protein 1371 39.47 0 1606036..1606524 + 162 209695005 - VSAL_I1497 - putative lipoprotein 1372 40.40 0 1606663..1606860 + 65 209695006 - VSAL_I1498 - hypothetical protein 1373 34.67 -1 1607000..1607149 + 49 209695007 - VSAL_I1499 - hypothetical protein 1374 39.01 0 1607153..1607434 + 93 209695008 - VSAL_I1500 - hypothetical protein 1375 39.37 0 1607512..1608273 - 253 209695009 - VSAL_I1501 - hypothetical protein 1376 36.84 0 1608471..1608926 + 151 209695010 - VSAL_I1502 - putative acyltransferase 1377 33.94 -1 1608986..1609150 - 54 209695011 - VSAL_I1503 - hypothetical protein 1378 38.25 0 1609303..1609851 + 182 209695012 maa VSAL_I1504 - maltose O-acetyltransferase 1379 37.09 0 1609971..1610396 + 141 209695013 - VSAL_I1505 - hypothetical protein 1380 40.20 0 1610424..1611224 + 266 209695014 - VSAL_I1506 - putative phenazine biosynthesis-like protein 1381 37.50 0 1611272..1611775 + 167 209695015 - VSAL_I1507 - putative acetyltransferase 1382 36.93 0 1611858..1612607 - 249 209695016 OMT5 VSAL_I1508 - putative methyltransferase 1383 37.86 0 1612856..1613518 + 220 209695017 - VSAL_I1509 - hypothetical protein 1384 42.69 +1 1613721..1614158 + 145 209695018 - VSAL_I1510 - hypothetical protein 1385 37.68 0 1614222..1614635 + 137 209695019 - VSAL_I1511 - hypothetical protein 1386 35.96 -1 1614657..1614923 + 88 209695020 - VSAL_I1512 - membrane protein 1387 39.81 0 1614978..1615610 + 210 209695021 - VSAL_I1513 - putative metal dependent phosphohydrolase 1388 42.46 0 1615691..1617301 - 536 209695022 - VSAL_I1514 - FAD dependent oxidoreductase 1389 42.12 0 1617403..1618347 - 314 209695023 - VSAL_I1515 - HTH-type transcriptional regulator, LysR-family 1390 42.69 +1 1618507..1619874 + 455 209695024 - VSAL_I1516 - putative multidrug resistance protein 1391 37.14 0 1619937..1620593 + 218 209695025 - VSAL_I1517 - hypothetical protein 1392 34.13 -1 1620854..1620979 + 41 209695026 - VSAL_I1518 - hypothetical protein 1393 38.18 0 1621031..1621381 + 116 209695027 - VSAL_I1519 - hypothetical protein 1394 37.18 0 1621436..1621981 + 181 209695028 - VSAL_I1520 - hypothetical protein 1395 35.94 -1 1622833..1623714 - 293 209695029 - VSAL_I1522 - transposase 1396 36.07 -1 1625550..1626425 + 291 209695030 - VSAL_I1524 - mechanosensitive ion channel 1397 35.14 -1 1628943..1629386 - 147 209695031 - VSAL_I1526 - membrane protein 1398 37.28 0 1629520..1630077 + 185 209695032 - VSAL_I1527 - HTH-type transcriptional regulator, TetR family 1399 38.32 0 1630109..1630489 + 126 209695033 - VSAL_I1528 - hypothetical protein 1400 39.89 0 1630666..1631229 + 187 209695034 - VSAL_I1529 - putative glutaredoxin 1401 34.80 -1 1631245..1631928 + 227 209695035 - VSAL_I1530 - membrane protein 1402 37.04 0 1632037..1632198 + 53 209695036 - VSAL_I1531 - hypothetical protein 1403 38.08 0 1632486..1633874 + 462 209695037 - VSAL_I1532 - putative exported amidohydrolase 1404 36.51 0 1634028..1634342 + 104 209695038 - VSAL_I1533 - hypothetical protein 1405 38.19 0 1634685..1635446 - 253 209695039 - VSAL_I1534 - extracellular solute-binding protein 1406 40.16 0 1635734..1636627 + 297 209695040 - VSAL_I1535 - membrane protein 1407 38.98 0 1636724..1637290 + 188 209695041 yeiP VSAL_I1536 - elongation factor P-like protein 1408 40.24 0 1637373..1638545 - 390 209695042 - VSAL_I1537 - membrane protein 1409 40.86 0 1638580..1640001 - 473 209695043 - VSAL_I1538 - hypothetical protein 1410 39.20 0 1640170..1642812 - 880 209695044 - VSAL_I1539 - hypothetical protein 1411 40.02 0 1642790..1644016 - 408 209695045 - VSAL_I1540 - paraquat-inducible membrane protein A 1412 38.35 0 1644034..1645827 - 597 209695046 - VSAL_I1541 - ABC transporter ATP-binding protein 1413 35.54 -1 1645945..1646397 + 150 209695047 - VSAL_I1542 - hypothetical protein 1414 43.13 +1 1646621..1647253 + 210 209695048 proQ VSAL_I1543 - ProP effector 1415 37.94 0 1647271..1649289 + 672 209695049 prc VSAL_I1544 - tail-specific protease precursor 1416 29.63 -2 1649358..1650140 + 260 209695050 - VSAL_I1545 - hypothetical protein 1417 38.22 0 1653013..1653237 + 74 209695051 - VSAL_I1547 - hypothetical protein 1418 39.66 0 1658502..1659512 + 336 209695052 pyrD VSAL_I1549 - dihydroorotate dehydrogenase 1419 39.26 0 1659678..1660268 + 196 209695053 - VSAL_I1550 - hypothetical protein 1420 39.73 0 1660800..1662956 + 718 209695054 - VSAL_I1551 - putative RNA methylase 1421 39.09 0 1662962..1663204 + 80 209695055 - VSAL_I1552 - putative glutaredoxin 1422 39.77 0 1663185..1665095 + 636 209695056 uup VSAL_I1553 - ABC transporter ATP-binding protein 1423 40.54 0 1665104..1666768 + 554 209695057 - VSAL_I1554 - hypothetical protein 1424 44.83 +1 1666969..1667142 + 57 209695058 rmf VSAL_I1555 - ribosome modulation factor 1425 41.23 0 1667298..1667816 - 172 209695059 fabA VSAL_I1556 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase 1426 37.95 0 1667882..1669549 - 555 209695060 - VSAL_I1557 - putative protease La homolog 1427 31.77 -2 1669730..1670176 + 148 209695061 - VSAL_I1558 - hypothetical protein 1428 33.88 -1 1670230..1670781 - 183 209695062 - VSAL_I1559 - putative lipoprotein 1429 33.57 -1 1671140..1673233 - 697 209695063 - VSAL_I1560 - response regulator, histidine kinase 1430 35.78 -1 1673234..1674418 - 394 209695064 - VSAL_I1561 - hypothetical protein 1431 34.65 -1 1674517..1674972 - 151 209695065 - VSAL_I1562 - hypothetical protein 1432 41.51 0 1675242..1676672 + 476 209695066 ctaD VSAL_I1563 - cytochrome c oxidase subunit 1 1433 42.32 0 1676685..1677296 + 203 209695067 fixO VSAL_I1564 - mono-heme cytochrome c 1434 38.80 0 1677307..1677489 + 60 209695068 - VSAL_I1565 - Cbb3-type cytochrome oxidase component 1435 41.85 0 1677486..1678460 + 324 209695069 - VSAL_I1566 - diheme cytochrome c 1436 36.21 -1 1678533..1679018 + 161 209695070 - VSAL_I1567 - hypothetical protein 1437 39.35 0 1679025..1681400 + 791 209695071 - VSAL_I1568 - putative cation-transporting ATPase 1438 35.67 -1 1681393..1681563 + 56 209695072 - VSAL_I1569 - cytochrome oxidase maturation protein (cbb3-t) 1439 38.96 0 1681553..1682227 + 224 209695073 - VSAL_I1570 - membrane protein 1440 38.91 0 1682324..1683076 + 250 209695074 fnr VSAL_I1571 - fumarate and nitrate reduction regulatory protein 1441 38.94 0 1683229..1684173 + 314 209695075 uspE VSAL_I1572 - universal stress protein E 39.44 MEAN 3.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0