version 1.0
Aliivibrio salmonicida LFI1238 chromosome 1, complete genome - 1..3325165 2820 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1294 35.07 -1 1522197..1522598 + 133 209694928 - VSAL_I1404 - hypothetical protein 1295 36.07 -1 1522687..1522869 - 60 209694929 - VSAL_I1405 - hypothetical protein 1296 37.04 0 1523086..1523517 + 143 209694930 - VSAL_I1406 - membrane protein 1297 37.57 0 1523869..1524600 + 243 209694931 - VSAL_I1407 - putative glycosyl transferase 1298 37.31 0 1524623..1525201 + 192 209694932 - VSAL_I1408 - membrane protein 1299 35.83 -1 1526495..1527376 - 293 209694933 - VSAL_I1410 - transposase 1300 38.56 0 1528352..1528810 + 152 209694934 - VSAL_I1411 - hypothetical protein 1301 38.64 0 1528916..1529311 + 131 209694935 - VSAL_I1412 - hypothetical protein 1302 35.79 -1 1529362..1529850 + 162 209694936 - VSAL_I1413 - hypothetical protein 1303 37.78 0 1530171..1530485 + 104 209694937 - VSAL_I1415 - transposase 1304 36.21 -1 1530482..1530829 + 115 209694938 - VSAL_I1416 - transposase 1305 39.85 0 1530901..1532388 + 495 209694939 - VSAL_I1417 - transposase 1306 38.48 0 1534103..1534549 + 148 209694940 - VSAL_I1418 - putative acetyltransferase 1307 38.57 0 1534590..1535009 + 139 209694941 - VSAL_I1419 - putative acetyltransferase 1308 37.52 0 1535018..1535806 + 262 209694942 - VSAL_I1420 - hypothetical protein 1309 39.59 0 1535830..1536660 + 276 209694943 - VSAL_I1421 - sulfurtransferase (rhodanese-like protein) 1310 32.88 -2 1536688..1536906 + 72 209694944 - VSAL_I1422 - hypothetical protein 1311 35.64 -1 1537500..1537976 + 158 209694945 - VSAL_I1424 - putative acetyltransferase 1312 34.04 -1 1538051..1538617 - 188 209694946 - VSAL_I1425 - transposase 1313 35.70 -1 1538635..1539057 - 140 209694947 - VSAL_I1426 - transposase 1314 31.67 -2 1539188..1539427 - 79 209694948 - VSAL_I1427 - hypothetical protein 1315 39.26 0 1540076..1540750 - 224 209694949 - VSAL_I1428 - hypothetical protein 1316 40.54 0 1541787..1542980 - 397 209694950 - VSAL_I1430 - transposase 1317 36.91 0 1544754..1545284 + 176 209694951 - VSAL_I1431 - putative acetyltransferase 1318 38.46 0 1545349..1545699 + 116 209694952 - VSAL_I1432 - hypothetical protein 1319 40.39 0 1546052..1548943 + 963 209694953 - VSAL_I1433 - hypothetical protein 1320 43.13 +1 1550006..1550791 + 261 209694954 - VSAL_I1435 - hypothetical protein 1321 44.67 +1 1550854..1551594 + 246 209694955 - VSAL_I1436 - hypothetical protein 1322 42.08 0 1551597..1552316 + 239 209694956 - VSAL_I1437 - putative allophanate hydrolase subunit 1 1323 43.78 +1 1552313..1553269 + 318 209694957 - VSAL_I1438 - putative allophanate hydrolase subunit 2 1324 37.78 0 1553364..1553678 + 104 209694958 - VSAL_I1439 - transposase 1325 35.94 -1 1553950..1554831 - 293 209694959 - VSAL_I1441 - transposase 1326 39.65 0 1555101..1556588 + 495 209694960 - VSAL_I1442 - transposase 1327 43.64 +1 1556716..1557957 + 413 209694961 - VSAL_I1443 - putative transmembrane transport protein 1328 40.70 0 1558822..1560015 - 397 209694962 - VSAL_I1445 - transposase 1329 39.93 0 1562147..1563268 + 373 209694963 mltC VSAL_I1446 - membrane-bound lytic murein transglycosylase C 1330 35.28 -1 1563304..1565457 + 717 209694964 - VSAL_I1447 - putative metal dependent phosphohydrolases 1331 44.37 +1 1565543..1566394 - 283 209694965 - VSAL_I1448 - putative formate dehydrogenase accessory protein 1332 41.67 0 1566536..1567543 + 335 209694966 - VSAL_I1449 - hypothetical protein 1333 43.17 +1 1567750..1569426 + 558 209694967 - VSAL_I1450 - putative ferredoxin 1334 44.12 +1 1569431..1570042 + 203 209694968 - VSAL_I1451 - putative cytoplasmic chaperone TorD 1335 44.44 +1 1570121..1570318 + 65 209694969 - VSAL_I1452 - hypothetical protein 1336 45.66 +2 1570330..1573185 + 951 209694970 fdhA VSAL_I1453 - formate dehydrogenase 1337 46.47 +2 1573197..1573805 + 202 209694971 fdhB VSAL_I1454 - formate dehydrogenase iron-sulfur subunit 1338 43.04 +1 1573822..1574841 + 339 209694972 fdnI VSAL_I1455 - putative formate dehydrogenase 1339 39.70 0 1575087..1575620 + 177 209694973 rimL VSAL_I1456 - ribosomal-protein-serine acetyltransferase 1340 37.54 0 1575814..1576692 + 292 209694974 - VSAL_I1457 - hypothetical protein 1341 35.94 -1 1578104..1578985 + 293 209694975 - VSAL_I1459 - transposase 1342 27.05 -2 1579165..1579944 + 259 209694976 - VSAL_I1460 - HTH-type transcriptional regulator, AraC family 1343 34.04 -1 1581620..1582186 - 188 209694977 - VSAL_I1463 - transposase 1344 35.70 -1 1582204..1582626 - 140 209694978 - VSAL_I1464 - transposase 1345 25.00 -2 1583625..1583840 + 71 209694979 - VSAL_I1465 - hypothetical protein 1346 39.60 0 1583876..1584832 - 318 209694980 - VSAL_I1466 - transposase 1347 37.12 0 1585157..1585579 + 140 209694981 - VSAL_I1467 - hypothetical protein 1348 38.25 0 1585901..1586185 - 94 209694982 - VSAL_I1469 - putative plasmid stabilisation system protein 1349 40.16 0 1586175..1586423 - 82 209694983 - VSAL_I1470 - hypothetical protein 1350 41.19 0 1586716..1587504 + 262 209694984 - VSAL_I1471 - putative antibiotic resistance protein 1351 40.18 0 1587526..1587978 + 150 209694985 - VSAL_I1472 - NUDIX hydrolase 1352 34.93 -1 1588003..1588503 + 166 209694986 - VSAL_I1473 - putative acetyltransferase 1353 36.93 0 1588718..1589356 + 212 209694987 - VSAL_I1475 - outer membrane protein 1354 34.95 -1 1589483..1589914 + 143 209694988 - VSAL_I1476 - membrane protein 1355 35.70 -1 1590020..1590442 + 140 209694989 - VSAL_I1477 - transposase 1356 34.04 -1 1590460..1591026 + 188 209694990 - VSAL_I1478 - transposase 1357 36.52 0 1592512..1592919 + 135 209694991 - VSAL_I1481 - putative lipoprotein 1358 44.89 +1 1592965..1593717 + 250 209694992 - VSAL_I1482 - glucose 1-dehydrogenase 1359 41.03 0 1593892..1594086 + 64 209694993 - VSAL_I1483 - hypothetical protein 1360 39.75 0 1594166..1594882 - 238 209694994 - VSAL_I1484 - short chain dehydrogenase 1361 40.92 0 1595114..1595812 + 232 209694995 - VSAL_I1485 - hypothetical protein 1362 38.61 0 1596113..1596643 + 176 209694996 - VSAL_I1486 - cold-shock protein 1363 45.76 +2 1596738..1597091 + 117 209694997 - VSAL_I1487 - hypothetical protein 1364 37.27 0 1597367..1598788 + 473 209694998 - VSAL_I1488 - hypothetical protein 1365 37.66 0 1599131..1599523 + 130 209694999 - VSAL_I1489 - hypothetical protein 1366 35.65 -1 1599692..1599907 - 71 209695000 - VSAL_I1490 - hypothetical protein 1367 35.70 -1 1600270..1600692 + 140 209695001 - VSAL_I1491 - transposase 1368 34.04 -1 1600710..1601276 + 188 209695002 - VSAL_I1492 - transposase 1369 39.48 0 1604231..1604734 + 167 209695003 - VSAL_I1494 - putative acetyltransferase 1370 37.43 0 1604742..1605449 - 235 209695004 - VSAL_I1495 - hypothetical protein 1371 39.47 0 1606036..1606524 + 162 209695005 - VSAL_I1497 - putative lipoprotein 1372 40.40 0 1606663..1606860 + 65 209695006 - VSAL_I1498 - hypothetical protein 1373 34.67 -1 1607000..1607149 + 49 209695007 - VSAL_I1499 - hypothetical protein 1374 39.01 0 1607153..1607434 + 93 209695008 - VSAL_I1500 - hypothetical protein 1375 39.37 0 1607512..1608273 - 253 209695009 - VSAL_I1501 - hypothetical protein 1376 36.84 0 1608471..1608926 + 151 209695010 - VSAL_I1502 - putative acyltransferase 1377 33.94 -1 1608986..1609150 - 54 209695011 - VSAL_I1503 - hypothetical protein 1378 38.25 0 1609303..1609851 + 182 209695012 maa VSAL_I1504 - maltose O-acetyltransferase 1379 37.09 0 1609971..1610396 + 141 209695013 - VSAL_I1505 - hypothetical protein 1380 40.20 0 1610424..1611224 + 266 209695014 - VSAL_I1506 - putative phenazine biosynthesis-like protein 1381 37.50 0 1611272..1611775 + 167 209695015 - VSAL_I1507 - putative acetyltransferase 1382 36.93 0 1611858..1612607 - 249 209695016 OMT5 VSAL_I1508 - putative methyltransferase 1383 37.86 0 1612856..1613518 + 220 209695017 - VSAL_I1509 - hypothetical protein 1384 42.69 +1 1613721..1614158 + 145 209695018 - VSAL_I1510 - hypothetical protein 1385 37.68 0 1614222..1614635 + 137 209695019 - VSAL_I1511 - hypothetical protein 1386 35.96 -1 1614657..1614923 + 88 209695020 - VSAL_I1512 - membrane protein 1387 39.81 0 1614978..1615610 + 210 209695021 - VSAL_I1513 - putative metal dependent phosphohydrolase 1388 42.46 0 1615691..1617301 - 536 209695022 - VSAL_I1514 - FAD dependent oxidoreductase 1389 42.12 0 1617403..1618347 - 314 209695023 - VSAL_I1515 - HTH-type transcriptional regulator, LysR-family 1390 42.69 +1 1618507..1619874 + 455 209695024 - VSAL_I1516 - putative multidrug resistance protein 1391 37.14 0 1619937..1620593 + 218 209695025 - VSAL_I1517 - hypothetical protein 1392 34.13 -1 1620854..1620979 + 41 209695026 - VSAL_I1518 - hypothetical protein 1393 38.18 0 1621031..1621381 + 116 209695027 - VSAL_I1519 - hypothetical protein 39.44 MEAN 3.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0