version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 590 44.66 0 627158..629179 + 673 196155415 - MADE_00592 - Beta-hexosaminidase A precursor 591 43.51 0 629261..630331 + 356 196155416 - MADE_00593 - MscS Mechanosensitive ion channel 592 44.30 0 630491..631840 - 449 196155417 - MADE_00594 - putative lipoprotein 593 47.29 0 632039..633034 - 331 196155418 - MADE_00595 - glucokinase regulatory-like protein 594 50.23 +1 633225..634301 + 358 196155419 - MADE_00596 - alanine racemase 595 44.11 0 634699..635403 - 234 196155420 - MADE_00597 - hypothetical protein 596 40.81 -1 635625..635945 - 106 196155421 - MADE_00598 - hypothetical protein 597 41.86 0 636052..636438 - 128 196155422 - MADE_00599 - Glyoxalase/bleomycin resistance protein/dioxygenase 598 45.40 0 636742..637860 + 372 196155423 - MADE_00600 - hypothetical protein 599 43.73 0 637881..638678 + 265 196155424 - MADE_00601 - probable ABC transporter, periplasmic substrate-binding protein 600 45.47 0 638848..640116 + 422 196155425 - MADE_00602 - putative manganese transporter 601 50.25 +1 640301..640708 + 135 196155426 - MADE_00603 - hypothetical protein 602 42.73 0 640789..641118 - 109 196155427 - MADE_00604 - PhnA protein 603 44.30 0 641143..641598 - 151 196155428 - MADE_00605 - acetyltransferase, GNAT family protein 604 41.84 0 641595..642017 - 140 196155429 - MADE_00606 - Histone acetyltransferase HPA2/related acetyltransferase 605 43.48 0 642100..642237 - 45 196155430 - MADE_00607 - hypothetical protein 606 40.19 -1 642281..642703 + 140 196155431 - MADE_00608 - hypothetical protein 607 35.12 -2 642759..642926 + 55 196155432 - MADE_00609 - hypothetical protein 608 38.64 -1 643255..643518 - 87 196155433 - MADE_00610 - hypothetical protein 609 44.20 0 643680..643817 - 45 196155434 - MADE_00611 - Plasmid maintenance system antidote protein 610 42.22 0 644424..644648 + 74 196155435 - MADE_00612 - hypothetical protein 611 37.07 -2 644638..644931 + 97 196155436 - MADE_00613 - putative relE protein 612 42.09 0 645043..645339 - 98 196155437 - MADE_00614 - Plasmid stabilization system 613 42.01 0 645343..645561 - 72 196155438 - MADE_00615 - hypothetical protein 614 42.37 0 645987..646163 - 58 196155439 - MADE_00616 - glucose-6-phosphate isomerase 615 47.95 0 646261..646431 - 56 196155440 - MADE_00617 - hypothetical protein 616 43.13 0 646539..647528 + 329 196155441 - MADE_00618 - ISGsu4, transposase 617 42.91 0 647963..648223 - 86 196155442 - MADE_00619 - hypothetical protein 618 42.47 0 648228..648446 - 72 196155443 - MADE_00620 - predicted transcriptional regulator 619 45.61 0 648555..648668 - 37 196155444 - MADE_00621 - hypothetical protein 620 41.27 -1 648688..648939 - 83 196155445 - MADE_00622 - hypothetical protein 621 41.15 -1 649070..649312 + 80 196155446 - MADE_00623 - predicted transcriptional regulator 622 43.94 0 649979..650242 - 87 196155447 - MADE_00624 - hypothetical protein 623 41.04 -1 650527..651006 - 159 196155448 - MADE_00625 - hypothetical protein 624 40.48 -1 651120..651833 - 237 196155449 - MADE_00626 - hypothetical protein 625 46.03 0 651838..652089 - 83 196155450 - MADE_00627 - hypothetical protein 626 42.96 0 652463..653179 + 238 196155451 - MADE_00628 - ISGsu4, transposase 627 43.15 0 653202..653588 - 128 196155452 - MADE_00629 - PilT protein domain protein 628 41.99 0 653588..653818 - 76 196155453 - MADE_00630 - Prevent-host-death protein 629 42.99 0 654192..655082 - 296 196155454 - MADE_00631 - regulatory protein, LysR:LysR, substrate-binding 630 45.78 0 655286..657004 + 572 196155455 - MADE_00632 - toxin secretion ABC transporter ATP-binding protein 631 50.62 +1 657005..658057 + 350 196155456 - MADE_00633 - membrane fusion protein 632 46.12 0 658051..659481 + 476 196155457 - MADE_00634 - outer membrane component of multidrug efflux pump 633 43.79 0 659670..660482 - 270 196155458 - MADE_00635 - hypothetical protein 634 36.43 -2 660720..660848 - 42 196155459 - MADE_00636 - hypothetical protein 635 39.72 -1 660900..661181 - 93 196155460 - MADE_00637 - hypothetical protein 636 48.60 +1 661249..661713 - 154 196155461 - MADE_00638 - CheC-like protein 637 44.95 0 662212..662676 - 154 196155462 - MADE_00639 - stationary-phase regulator of sigma D, the major sigma subunit of RNA polymerase 638 44.96 0 662840..663673 + 277 196155463 - MADE_00640 - NUDIX family pyrophosphohydrolase containing a Zn-finger 639 45.76 0 663902..665044 + 380 196155464 - MADE_00641 - uroporphyrinogen decarboxylase 640 48.06 0 665069..665713 + 214 196155465 - MADE_00642 - hypothetical protein 641 46.63 0 665757..666899 - 380 196155466 - MADE_00643 - putative 4Fe-4S binding protein 642 49.93 +1 666906..668405 + 499 196155467 - MADE_00644 - carbohydrate kinase, YjeF related protein 643 43.89 0 668480..668962 + 160 196155468 - MADE_00645 - ATP/GTP hydrolase 644 46.79 0 668947..670380 + 477 196155469 - MADE_00646 - N-acetylmuramoyl-l-alanine amidase II, murein hydrolase 645 44.61 0 670481..672307 + 608 196155470 - MADE_00647 - DNA mismatch repair protein 646 45.92 0 672339..673244 + 301 196155471 - MADE_00648 - tRNA delta(2)-isopentenylpyrophosphate transferase 647 41.37 -1 673323..673571 + 82 196155472 - MADE_00649 - RNA-binding protein Hfq 648 46.98 0 673589..674878 + 429 196155473 - MADE_00650 - GTP-binding protein HflX 649 49.65 +1 674946..676097 + 383 196155474 - MADE_00651 - HflK complex with HflC 650 44.78 0 676103..676984 + 293 196155475 - MADE_00652 - Membrane protease, stomatin/prohibitin family protein 651 48.67 +1 677304..678881 + 525 196155476 - MADE_00653 - putative p-aminobenzoyl-glutamate transport protein (AbgT family) 652 46.30 0 679114..680193 + 359 196155477 - MADE_00654 - Protoheme ferro-lyase 653 45.34 0 680287..680694 + 135 196155478 - MADE_00655 - hypothetical protein 654 47.71 0 680928..682568 + 546 196155479 - MADE_00656 - thiamine pyrophosphate enzyme-like TPP-binding 655 49.44 +1 682601..684028 + 475 196155480 - MADE_00657 - Aldehyde dehydrogenase 656 50.27 +1 684131..684496 - 121 196155481 - MADE_00658 - hypothetical protein 657 44.62 0 684635..685387 + 250 196155482 - MADE_00659 - 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase 658 46.36 0 685636..686610 + 324 196155483 - MADE_00660 - putative lactonizing lipase 659 46.16 0 686610..687599 + 329 196155484 - MADE_00661 - lipase chaperone 660 45.81 0 687778..688338 + 186 196155485 - MADE_00662 - Glutathione S-transferase 661 47.88 0 688338..688997 + 219 196155486 - MADE_00663 - Glutathione S-transferase 662 47.49 0 689050..689967 - 305 196155487 - MADE_00664 - homocysteine S-methyltransferase family protein 663 45.35 0 690001..691173 - 390 196155488 - MADE_00665 - transcriptional regulator, ROK family protein 664 47.06 0 691459..692427 + 322 196155489 - MADE_00666 - Sugar kinase, ribokinase family protein 665 46.88 0 692616..693191 - 191 196155490 - MADE_00667 - elongation factor P 666 49.91 +1 693289..695019 - 576 196155491 - MADE_00668 - DNA ligase 667 47.59 0 695019..696035 - 338 196155492 - MADE_00669 - exonuclease of the beta-lactamase fold involved in RNA processing-like protein 668 48.71 +1 696196..698802 + 868 196155493 - MADE_00670 - ATP-dependent RNA helicase, DEAD/DEAH box family protein 669 47.66 0 698987..699691 + 234 196155494 - MADE_00671 - metallophosphoesterase 670 50.00 +1 699850..700743 - 297 196155495 - MADE_00672 - glycosyl hydrolase, family 10 671 46.67 0 700730..701794 - 354 196155496 - MADE_00673 - Porphyromonas-type peptidyl-arginine deiminase 672 45.30 0 701933..702517 - 194 196155497 - MADE_00674 - short chain dehydrogenase 673 45.32 0 702803..703486 + 227 196155498 - MADE_00675 - GTP cyclohydrolase I 674 45.18 0 704171..706120 - 649 196155499 - MADE_00676 - alpha-amylase, amylosucrase 675 44.42 0 706420..707637 + 405 196155500 - MADE_00677 - transporter, putative 676 46.94 0 707779..708594 + 271 196155501 - MADE_00678 - mechanosensitive ion channel family protein 677 46.88 0 708694..709077 - 127 196155502 - MADE_00679 - glyoxylase I family protein 678 46.47 0 709109..710014 - 301 196155503 - MADE_00680 - oxidoreductase, aldo/keto reductase family protein 679 47.88 0 710313..710855 + 180 196155504 - MADE_00681 - lipoprotein Blc 680 47.76 0 710952..711998 + 348 196155505 - MADE_00682 - dihydroorotase 681 46.23 0 712119..713498 + 459 196155506 - MADE_00683 - ATP-dependent RNA helicase DbpA 682 45.36 0 713534..713932 + 132 196155507 - MADE_00684 - hypothetical protein 683 45.72 0 714113..716179 - 688 196155508 - MADE_00685 - metalloendopeptidase PepO 684 36.23 -2 716215..716421 - 68 196155509 - MADE_00686 - hypothetical protein 685 48.24 0 716443..717066 + 207 196155510 - MADE_00687 - Dimethylmenaquinone methyltransferase 686 47.39 0 717324..719165 + 613 196155511 - MADE_00688 - multidrug resistance ABC transporter ATP-binding and permease protein 687 43.95 0 719529..719867 + 112 196155512 - MADE_00689 - Preprotein translocase subunit SecE 688 44.75 0 719872..720423 + 183 196155513 - MADE_00690 - transcription termination/antitermination factor NusG 689 33.33 -2 720844..720957 + 37 196155514 - MADE_00691 - hypothetical protein 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0