version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 483 48.17 0 510657..511721 - 354 196155308 - MADE_00485 - aspartate carbamoyltransferase 484 45.33 0 511802..512476 - 224 196155309 - MADE_00486 - transcriptional regulator, TetR family protein 485 48.60 +1 512593..513732 + 379 196155310 - MADE_00487 - efflux transporter, RND family, MFP subunit 486 48.20 0 513732..516878 + 1048 196155311 - MADE_00488 - AcrB/AcrD/AcrF family protein 487 46.30 0 517043..517759 + 238 196155312 - MADE_00489 - hypothetical protein 488 45.35 0 517756..520884 - 1042 196155313 - MADE_00490 - sensor protein BarA 489 43.97 0 521065..521205 + 46 196155314 - MADE_00491 - hypothetical protein 490 49.04 +1 521202..523487 + 761 196155315 - MADE_00492 - DNA topoisomerase IV, subunit A 491 45.37 0 523551..524090 + 179 196155316 - MADE_00493 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 492 45.63 0 524100..526262 + 720 196155317 - MADE_00494 - sensory box protein 493 45.61 0 526383..527156 - 257 196155318 - MADE_00495 - hypothetical protein 494 43.65 0 527188..527313 + 41 196155319 - MADE_00497 - hypothetical protein 495 49.52 +1 527305..528774 - 489 196155320 - MADE_00496 - succinylglutamic semialdehyde dehydrogenase 496 47.30 0 528788..529825 - 345 196155321 - MADE_00498 - arginine N-succinyltransferase 497 47.64 0 529846..531054 - 402 196155322 - MADE_00499 - bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein 498 43.65 0 531521..532741 - 406 196155323 - MADE_00500 - putative signal transduction protein 499 46.84 0 532982..533566 - 194 196155324 - MADE_00501 - P-aminobenzoate synthetase, component II 500 46.13 0 533666..534673 - 335 196155325 - MADE_00502 - tryptophanyl-tRNA synthetase 501 44.72 0 534739..535458 - 239 196155326 - MADE_00503 - ribulose-phosphate 3-epimerase 502 43.80 0 535723..536544 + 273 196155327 - MADE_00504 - hypothetical protein 503 47.57 0 536715..537023 + 102 196155328 - MADE_00505 - hypothetical protein 504 42.29 0 537032..537232 + 66 196155329 - MADE_00506 - hypothetical protein 505 43.99 0 537324..538205 - 293 196155330 - MADE_00507 - DNA adenine methylase 506 44.51 0 538432..539943 - 503 196155331 - MADE_00508 - DamX-related protein 507 47.29 0 540115..541167 - 350 196155332 - MADE_00509 - 3-dehydroquinate synthase 508 45.16 0 541214..541729 - 171 196155333 - MADE_00510 - shikimate kinase 509 45.38 0 542000..543643 - 547 196155334 - MADE_00511 - putative type IV pilus biogenesis protein PilQ (cytoplasmic ATPase) 510 46.95 0 543775..544266 - 163 196155335 - MADE_00512 - putative Type IV pilus biogenesis protein PilP 511 43.79 0 544299..544910 - 203 196155336 - MADE_00513 - type IV pilus biogenesis protein PilO 512 41.92 0 544910..545491 - 193 196155337 - MADE_00514 - type IV pilus biogenesis protein PilN 513 44.10 0 545479..546546 - 355 196155338 - MADE_00515 - putative Type IV pilus biogenesis protein PilM 514 47.52 0 546683..549346 + 887 196155339 - MADE_00516 - bifunctional murein transglycosylase/transpeptidase 515 47.87 0 549425..551116 + 563 196155340 - MADE_00517 - NAD-linked malate dehydrogenase 516 45.83 0 551500..551691 + 63 196155341 - MADE_00518 - hypothetical protein 517 46.74 0 551982..552839 + 285 196155342 - MADE_00519 - putative Glutathione S-transferase 518 44.70 0 552888..553415 - 175 196155343 - MADE_00520 - hypothetical protein 519 35.56 -2 553439..553573 + 44 196155344 - MADE_00521 - hypothetical protein 520 47.70 0 553791..555266 + 491 196155345 - MADE_00522 - catalase 521 42.79 0 555319..555921 - 200 196155346 - MADE_00523 - transcriptional regulator, TetR family protein 522 44.87 0 556201..557067 - 288 196155347 - MADE_00524 - alpha/beta hydrolase-like protein 523 43.73 0 557201..559162 - 653 196155348 - MADE_00525 - sensory box/GGDEF family protein 524 36.95 -2 559190..559438 - 82 196155349 - MADE_00526 - diguanylate cyclase/phosphodiesterase 525 49.81 +1 559628..560938 - 436 196155350 - MADE_00527 - amino-acid N-acetyltransferase 526 49.39 +1 560954..562336 - 460 196155351 - MADE_00528 - argininosuccinate lyase 527 49.25 +1 562401..563606 - 401 196155352 - MADE_00529 - argininosuccinate synthase 528 48.57 +1 563644..564555 - 303 196155353 - MADE_00530 - Ornithine carbamoyltransferase (OTCase) 529 49.63 +1 564555..565358 - 267 196155354 - MADE_00531 - acetylglutamate kinase 530 47.24 0 565355..566368 - 337 196155355 - MADE_00532 - N-acetyl-gamma-glutamyl-phosphate reductase 531 48.42 +1 566947..567357 + 136 196155356 - MADE_00533 - methylglyoxal synthase 532 44.69 0 567475..568302 - 275 196155357 - MADE_00534 - hypothetical protein 533 42.61 0 568512..569255 + 247 196155358 - MADE_00535 - Transcriptional regulatory protein CpxR 534 49.12 +1 569255..570616 + 453 196155359 - MADE_00536 - putative sensor histidine kinase protein 535 46.03 0 570679..571647 + 322 196155360 - MADE_00537 - lysophospholipase L2 536 46.67 0 571778..572242 + 154 196155361 - MADE_00538 - putative tRNA/rRNA methyltransferase 537 45.02 0 572414..572815 + 133 196155362 - MADE_00539 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 538 48.48 +1 572858..573880 - 340 196155363 - MADE_00540 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 539 47.25 0 573900..574409 - 169 196155364 - MADE_00541 - export protein SecB 540 47.51 0 574472..574732 - 86 196155365 - MADE_00542 - glutaredoxin 3 GrxC 541 40.14 -1 574745..575170 - 141 196155366 - MADE_00543 - rhodanese domain protein 542 46.39 0 575421..576584 + 387 196155367 - MADE_00544 - peptidase, M23/M37 family protein 543 46.59 0 576940..577701 + 253 196155368 - MADE_00545 - hypothetical protein 544 42.86 0 577951..578286 + 111 196155369 - MADE_00546 - MerC-like membrane protein 545 45.94 0 578326..579015 - 229 196155370 - MADE_00547 - glycerophosphoryl diester phosphodiesterase family protein 546 44.06 0 579047..579922 - 291 196155371 - MADE_00548 - membrane protein 547 47.14 0 579926..580903 - 325 196155372 - MADE_00549 - Phosphatidylserine decarboxylase 548 46.84 0 581070..582113 - 347 196155373 - MADE_00550 - ribosome-associated GTPase 549 43.41 0 582200..582745 + 181 196155374 - MADE_00551 - oligoribonuclease 550 40.63 -1 583385..584179 + 264 196155375 - MADE_00552 - hypothetical protein 551 45.58 0 584657..587743 + 1028 196155376 - MADE_00553 - TonB-dependent receptor 552 42.64 0 587927..588388 + 153 196155377 - MADE_00554 - Thioesterase (4HBT) superfamily enzyme 553 44.02 0 588605..588997 + 130 196155378 - MADE_00555 - hypothetical protein 554 46.95 0 589271..590989 + 572 196155379 - MADE_00556 - acetolactate synthase III large subunit 555 49.40 +1 590989..591486 + 165 196155380 - MADE_00557 - acetolactate synthase III, small subunit 556 47.92 0 591638..592624 - 328 196155381 - MADE_00558 - hypothetical protein 557 39.13 -1 592776..592913 + 45 196155382 - MADE_00559 - hypothetical protein 558 41.25 -1 592883..593122 + 79 196155383 - MADE_00560 - twin argininte translocase protein A 559 43.67 0 593122..593421 + 99 196155384 - MADE_00561 - sec-independent translocase 560 45.24 0 593422..594177 + 251 196155385 - MADE_00562 - Sec-independent periplasmic protein translocation protein TatC 561 44.51 0 594203..594739 + 178 196155386 - MADE_00563 - hypothetical protein 562 46.46 0 594740..595516 + 258 196155387 - MADE_00564 - Mg-dependent DNase 563 43.03 0 595540..597426 + 628 196155388 - MADE_00565 - Signaling protein with a acyltransferase and GGDEF domains 564 48.42 +1 597453..598433 + 326 196155389 - MADE_00566 - delta-aminolevulinic acid dehydratase 565 44.51 0 598522..600033 - 503 196155390 - MADE_00567 - guanosine pentaphosphatase 566 46.90 0 600070..601359 - 429 196155391 - MADE_00568 - ATP-dependent RNA helicase 567 40.41 -1 601448..601786 + 112 196155392 - MADE_00569 - thioredoxin 568 46.37 0 602058..603323 + 421 196155393 - MADE_00570 - transcription termination factor Rho 569 46.50 0 603550..604848 + 432 196155394 - MADE_00571 - Peptidase M20D, amidohydrolase 570 44.02 0 604937..607696 + 919 196155395 - MADE_00572 - putative signal transduction histidine kinase two-component system with Protein-glutamate methylesterase domain 571 47.69 0 607658..608932 - 424 196155396 - MADE_00573 - Na+/H+ antiporter, NhaA 572 48.89 +1 609211..609705 + 164 196155397 - MADE_00574 - phosphoribosylaminoimidazole carboxylase catalytic subunit 573 47.41 0 609702..610838 + 378 196155398 - MADE_00575 - phosphoribosylaminoimidazole carboxylase 574 43.46 0 611040..611582 + 180 196155399 - MADE_00576 - hypothetical protein 575 43.88 0 611769..612242 + 157 196155400 - MADE_00577 - putative DNA-binding stress protein 576 48.03 0 612424..613593 + 389 196155401 - MADE_00578 - Glucose dehydrogenase, putative 577 47.85 0 613648..615762 - 704 196155402 - MADE_00579 - putative peptidase 578 41.44 -1 615953..616285 - 110 196155403 - MADE_00580 - predicted membrane protein 579 43.79 0 616482..617351 + 289 196155404 - MADE_00581 - Thioredoxin domain-containing protein 580 46.01 0 617407..617832 - 141 196155405 - MADE_00582 - hypothetical protein 581 44.92 0 618096..619286 + 396 196155406 - MADE_00583 - hypothetical protein 582 42.08 0 619320..619502 + 60 196155407 - MADE_00584 - hypothetical protein 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0