version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 379 37.04 -2 400142..400870 - 242 196155204 - MADE_00381 - lipid A phosphoethanolamine transferase, associated with polymyxin resistance 380 42.97 0 400991..402733 - 580 196155205 - MADE_00382 - glycosyl transferase, family 39 381 40.73 -1 402708..403424 - 238 196155206 - MADE_00383 - hypothetical protein 382 39.46 -1 403425..404159 - 244 196155207 - MADE_00384 - glycosyl transferase, group 2 family protein 383 40.62 -1 405096..405740 + 214 196155208 - MADE_00385 - transcriptional regulator 384 38.19 -1 405724..407163 + 479 196155209 - MADE_00386 - putative sensor transduction kinase (copper resistance) 385 39.88 -1 408753..409271 + 172 196155210 - MADE_00387 - putative metal-binding protein 386 38.70 -1 409352..409705 + 117 196155211 - MADE_00388 - putative copper resistance (CopC-like) protein 387 39.19 -1 409727..410614 + 295 196155212 - MADE_00389 - putative copper export protein 388 42.02 0 410680..411105 + 141 196155213 - MADE_00390 - putative orphan protein 389 37.30 -2 411353..411604 + 83 196155214 - MADE_00391 - hypothetical protein 390 36.68 -2 411863..412699 + 278 196155215 - MADE_00392 - methionyl-tRNA formyltransferase 391 36.88 -2 412806..413228 + 140 196155216 - MADE_00393 - hypothetical protein 392 41.38 -1 413494..413928 + 144 196155217 - MADE_00394 - putative Zn(II)-responsive transcriptional regulator, regulates Zn export (MerR family) protein 393 47.33 0 414004..416247 + 747 196155218 - MADE_00395 - Cation transport ATPase 394 42.56 0 416277..416612 + 111 196155219 - MADE_00396 - putative secreted protein containing plastocyanin domain 395 46.33 0 416783..416959 + 58 196155220 - MADE_00397 - hypothetical protein 396 42.50 0 416985..417617 + 210 196155221 - MADE_00398 - predicted protein-S-isoprenylcysteine methyltransferase 397 40.71 -1 417646..418011 + 121 196155222 - MADE_00399 - hypothetical protein 398 45.15 0 418164..418400 + 78 196155223 - MADE_00400 - hypothetical protein 399 46.21 0 418614..418745 + 43 196155224 - MADE_00401 - hypothetical protein 400 41.67 0 418847..419002 + 51 196155225 - MADE_00402 - hypothetical protein 401 42.31 0 419158..420483 - 441 196155226 - MADE_00403 - Amino acid permease-associated region 402 43.08 0 420641..421348 - 235 196155227 - MADE_00404 - hypothetical protein 403 46.67 0 421397..423211 - 604 196155228 - MADE_00405 - Multicopper oxidase 404 41.13 -1 423877..424581 - 234 196155229 - MADE_00406 - hypothetical protein 405 39.13 -1 424601..425014 - 137 196155230 - MADE_00407 - hypothetical protein 406 42.71 0 426300..426491 - 63 196155231 - MADE_00408 - site-specific recombinase, phage integrase family protein 407 33.33 -2 426810..426926 + 38 196155232 - MADE_00409 - hypothetical protein 408 45.49 0 427105..428289 + 394 196155233 - MADE_00410 - methyl-accepting chemotaxis protein 409 47.27 0 428346..428711 + 121 196155234 - MADE_00411 - chemotaxis protein CheY 410 47.36 0 428749..430773 + 674 196155235 - MADE_00412 - probable two-component sensor (CheA) 411 44.01 0 430770..431078 + 102 196155236 - MADE_00413 - purine-binding chemotaxis protein CheW 412 47.25 0 431167..431676 + 169 196155237 - MADE_00414 - CheD 413 47.95 0 431679..432725 + 348 196155238 - MADE_00415 - chemotaxis-specific methylesterase 414 41.38 -1 433156..433416 + 86 196155239 - MADE_00416 - hypothetical protein 415 46.93 0 433413..433640 - 75 196155240 - MADE_00417 - hypothetical protein 416 49.02 +1 433845..433997 + 50 196155241 - MADE_00418 - hypothetical protein 417 45.61 0 434236..434349 + 37 196155242 - MADE_00419 - hypothetical protein 418 47.46 0 434502..435506 + 334 196155243 - MADE_00420 - hypothetical maturase 419 46.56 0 435631..436356 - 241 196155244 - MADE_00421 - Cryptic haloacid dehalogenase 1 420 43.22 0 436533..438332 - 599 196155245 - MADE_00422 - GGDEF family protein 421 49.83 +1 438475..439359 - 294 196155246 - MADE_00423 - predicted permease, DMT superfamily protein 422 48.75 +1 439643..440161 + 172 196155247 - MADE_00424 - putative hydrolase/phosphatase protein 423 37.82 -2 440165..440320 - 51 196155248 - MADE_00425 - hypothetical protein 424 40.18 -1 440399..444241 + 1280 196155249 - MADE_00426 - putative two-component system sensor kinase/response regulator fusion protein 425 46.91 0 444260..444583 - 107 196155250 - MADE_00427 - hypothetical protein 426 44.08 0 444648..445652 - 334 196155251 - MADE_00428 - Twin-arginine translocation pathway signal 427 46.97 0 445656..446660 - 334 196155252 - MADE_00429 - transcriptional repressor, LacI family protein 428 50.18 +1 447058..448191 + 377 196155253 - MADE_00430 - oxidoreductase, Gfo/Idh/MocA family protein 429 49.06 +1 448228..449295 + 355 196155254 - MADE_00431 - Xylose isomerase-like TIM barrel 430 46.48 0 449346..450539 + 397 196155255 - MADE_00432 - putative nucleoside permease protein 431 45.38 0 450532..451461 + 309 196155256 - MADE_00433 - Twin-arginine translocation pathway signal 432 47.21 0 451506..453191 + 561 196155257 - MADE_00434 - oxidoreductase 433 44.98 0 453191..453808 + 205 196155258 - MADE_00435 - Twin-arginine translocation pathway signal 434 44.80 0 453796..454641 + 281 196155259 - MADE_00436 - putative multi-domain protein 435 44.04 0 454638..455786 - 382 196155260 - MADE_00437 - Iron-containing alcohol dehydrogenase 436 45.11 0 461725..462726 + 333 196155261 - MADE_00438 - branched-chain amino acid aminotransferase 437 45.52 0 462797..463543 - 248 196155262 - MADE_00439 - phosphoglyceromutase 438 43.07 0 463720..464181 - 153 196155263 - MADE_00440 - hypothetical protein 439 45.77 0 464656..467373 + 905 196155264 - MADE_00441 - aconitate hydratase 1 440 41.62 0 467438..467932 - 164 196155265 - MADE_00442 - hypothetical protein 441 45.33 0 468072..470288 - 738 196155266 - MADE_00443 - Bacterial type II secretion system protein E:GAF domain 442 45.51 0 470706..471017 + 103 196155267 - MADE_00444 - 30S ribosomal protein S10 443 45.85 0 471036..471674 + 212 196155268 - MADE_00445 - 50S ribosomal subunit protein L3 444 48.18 0 471693..472298 + 201 196155269 - MADE_00446 - 50S ribosomal protein L4 445 44.58 0 472355..472594 + 79 196155270 - MADE_00447 - 50S ribosomal protein L23 446 49.21 +1 472609..473433 + 274 196155271 - MADE_00448 - 50S ribosomal protein L2 447 48.77 +1 473563..473724 + 53 196155272 - MADE_00449 - 30S ribosomal protein S19 448 49.55 +1 473736..474068 + 110 196155273 - MADE_00450 - ribosomal protein L22 449 50.00 +1 474078..474509 + 143 196155274 - MADE_00451 - 30S ribosomal protein S3 450 48.18 0 474512..474922 + 136 196155275 - MADE_00452 - 50S ribosomal protein L16 451 44.27 0 474922..475113 + 63 196155276 - MADE_00453 - ribosomal protein L29 452 43.80 0 475113..475370 + 85 196155277 - MADE_00454 - ribosomal protein S17 453 47.98 0 475367..475564 - 65 196155278 - MADE_00455 - hypothetical protein 454 49.02 +1 475769..475921 + 50 196155279 - MADE_00456 - hypothetical protein 455 47.72 0 476160..477431 + 423 196155280 - MADE_00457 - hypothetical maturase 456 44.60 0 477574..478665 - 363 196155281 - MADE_00458 - glycosyl transferase, group 1 family protein 457 45.28 0 478694..479773 - 359 196155282 - MADE_00459 - lipopolysaccharide heptosyltransferase-1, putative 458 44.70 0 479903..481213 + 436 196155283 - MADE_00460 - 3-deoxy-D-manno-octulosonic-acid transferase 459 47.13 0 481493..483202 - 569 196155284 - MADE_00461 - Na+/H+ antiporter 460 45.61 0 483620..484450 + 276 196155285 - MADE_00462 - hypothetical protein 461 43.82 0 484696..485229 + 177 196155286 - MADE_00463 - hypothetical protein 462 48.14 0 485328..487238 - 636 196155287 - MADE_00464 - methyl-accepting chemotaxis protein 463 46.44 0 487541..489730 - 729 196155288 - MADE_00465 - peptidyl-dipeptidase Dcp 464 44.89 0 489977..490504 + 175 196155289 - MADE_00466 - formyltetrahydrofolate deformylase 465 46.02 0 490613..491416 - 267 196155290 - MADE_00467 - formyltetrahydrofolate deformylase 466 37.72 -2 491459..491572 + 37 196155291 - MADE_00468 - hypothetical protein 467 47.86 0 491690..492343 - 217 196155292 - MADE_00469 - 2,5 RNA ligase 468 49.12 +1 492587..495271 + 894 196155293 - MADE_00470 - ATP-dependent helicase HrpB 469 48.34 +1 495379..496644 - 421 196155294 - MADE_00471 - membrane-bound lytic transglycolase-related protein 470 47.73 0 497043..499271 + 742 196155295 - MADE_00472 - penicillin-binding protein 1B 471 42.74 0 499417..499533 - 38 196155296 - MADE_00473 - hypothetical protein 472 43.43 0 499539..499835 - 98 196155297 - MADE_00474 - hypothetical protein 473 34.04 -2 500006..500146 - 46 196155298 - MADE_00475 - hypothetical protein 474 46.67 0 500248..501177 - 309 196155299 - MADE_00476 - hypothetical protein 475 42.92 0 501636..502271 + 211 196155300 - MADE_00477 - AraC-type DNA-binding domain-containing protein 476 47.79 0 502320..503135 - 271 196155301 - MADE_00478 - hypothetical protein 477 48.08 0 503418..503756 + 112 196155302 - MADE_00479 - nitrogen regulatory protein P-II 478 48.32 +1 503789..505036 + 415 196155303 - MADE_00480 - putative ammonium transporter 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0