version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3850 47.97 0 4179096..4179464 + 122 196158675 - MADE_03880 - ABC transporter ATPase 3851 40.71 -1 4179806..4180198 - 130 196158676 - MADE_03881 - hypothetical protein 3852 42.99 0 4180318..4182108 - 596 196158677 - MADE_03882 - anaerobic ribonucleoside triphosphate reductase 3853 43.62 0 4182092..4182538 - 148 196158678 - MADE_03883 - Radical enzyme activating protein 3854 48.83 +1 4182934..4184766 - 610 196158679 - MADE_03884 - Glucosamine-fructose-6-phosphate aminotransferase 3855 49.01 +1 4184769..4185578 - 269 196158680 - MADE_03885 - transcriptional regulator, DeoR family protein 3856 36.36 -2 4185565..4185696 + 43 196158681 - MADE_03886 - hypothetical protein 3857 45.63 0 4185744..4186784 - 346 196158682 - MADE_03887 - YvaA 3858 46.65 0 4187011..4188369 - 452 196158683 - MADE_03888 - bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase 3859 43.80 0 4188637..4190022 + 461 196158684 - MADE_03889 - diguanylate cyclase 3860 49.60 +1 4190026..4190910 - 294 196158685 - MADE_03890 - probable transmembrane protein 3861 46.87 0 4190918..4191412 - 164 196158686 - MADE_03891 - Methylated DNA-protein cysteine methyltransferase 3862 48.04 0 4191414..4192841 - 475 196158687 - MADE_03892 - ada regulatory protein 3863 45.97 0 4193120..4194211 + 363 196158688 - MADE_03893 - putative beta-lactamase 3864 45.10 0 4194252..4196171 - 639 196158689 - MADE_03894 - arginine decarboxylase 3865 42.19 0 4196321..4196749 - 142 196158690 - MADE_03895 - arginine decarboxylase 3866 48.37 +1 4196949..4198298 - 449 196158691 - MADE_03896 - NAD(P) transhydrogenase subunit beta 3867 46.45 0 4198349..4198630 - 93 196158692 - MADE_03897 - probable NAD(P) transhydrogenase subunit alpha 3868 46.98 0 4198633..4199790 - 385 196158693 - MADE_03898 - NAD(P) transhydrogenase subunit alpha 3869 47.72 0 4200363..4203239 + 958 196158694 - MADE_03899 - TonB-dependent receptor 3870 47.99 0 4203324..4204892 + 522 196158695 - MADE_03900 - putative tryptophan halogenase 3871 45.58 0 4204929..4205663 + 244 196158696 - MADE_03901 - SapC related protein 3872 46.58 0 4205642..4206343 + 233 196158697 - MADE_03902 - hypothetical protein 3873 47.78 0 4206562..4209786 - 1074 196158698 - MADE_03903 - TonB-dependent receptor 3874 46.70 0 4209939..4210529 + 196 196158699 - MADE_03904 - putative RNA polymerase sigma-70 factor FecI 3875 45.80 0 4210522..4211628 + 368 196158700 - MADE_03905 - putative regulatory protein 3876 46.59 0 4211805..4212551 + 248 196158701 - MADE_03906 - hypothetical protein 3877 45.67 0 4212660..4212959 - 99 196158702 - MADE_03907 - peptidyl-prolyl cis-trans isomerase C 3878 47.05 0 4213025..4213921 - 298 196158703 - MADE_03908 - protoheme IX farnesyltransferase (Heme O synthase) 3879 41.13 -1 4214119..4214490 - 123 196158704 - MADE_03909 - cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D) 3880 46.76 0 4214490..4215107 - 205 196158705 - MADE_03910 - cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C) 3881 46.91 0 4215104..4217092 - 662 196158706 - MADE_03911 - Ubiquinol oxidase polypeptide I 3882 45.33 0 4217095..4218036 - 313 196158707 - MADE_03912 - Ubiquinol oxidase polypeptide II (Cytochrome o subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome o ubiquinol oxidase subunit 3883 45.10 0 4218186..4218593 - 135 196158708 - MADE_03913 - hypothetical protein 3884 36.98 -2 4219137..4219328 + 63 196158709 - MADE_03914 - SpoVT/AbrB-like protein 3885 42.16 0 4219417..4219722 + 101 196158710 - MADE_03915 - predicted nucleic acid-binding protein,contains PIN domain 3886 41.23 -1 4220342..4221151 - 269 196158711 - MADE_03916 - hypothetical protein 3887 40.05 -1 4221554..4222282 + 242 196158712 - MADE_03917 - hypothetical protein 3888 47.17 0 4222663..4224303 - 546 196158713 - MADE_03918 - Chaperonin GroEL (HSP60 family) protein 3889 46.74 0 4224344..4224634 - 96 196158714 - MADE_03919 - co-chaperonin GroES 3890 47.30 0 4224925..4225461 - 178 196158715 - MADE_03920 - fxsA protein 3891 42.22 0 4225675..4225989 + 104 196158716 - MADE_03922 - periplasmic divalent cation tolerance protein 3892 47.94 0 4226013..4227908 + 631 196158717 - MADE_03921 - thiol:disulfide interchange protein precursor 3893 48.30 0 4227910..4228791 + 293 196158718 - MADE_03923 - peptidase M23B 3894 48.98 +1 4229010..4229450 + 146 196158719 - MADE_03924 - 3-dehydroquinate dehydratase (3-dehydroquinase) (Type II DHQase) 3895 48.27 0 4229465..4229926 + 153 196158720 - MADE_03925 - acetyl-CoA carboxylase 3896 48.66 +1 4229941..4231284 + 447 196158721 - MADE_03926 - acetyl-CoA carboxylase 3897 46.01 0 4231824..4232762 + 312 196158722 - MADE_03927 - hypothetical protein 3898 44.44 0 4233001..4233441 + 146 196158723 - MADE_03928 - hypothetical protein 3899 43.51 0 4233512..4233796 - 94 196158724 - MADE_03929 - hypothetical protein 3900 45.67 0 4233871..4236018 - 715 196158725 - MADE_03930 - DNA polymerase III, epsilon subunit 3901 44.67 0 4236609..4236758 + 49 196158726 - MADE_03931 - hypothetical protein 3902 46.35 0 4236751..4237380 + 209 196158727 - MADE_03932 - hypothetical protein 3903 47.96 0 4237616..4237909 + 97 196158728 - MADE_03933 - high-potential iron sulfur protein isozyme-2, HiPIP-2 3904 48.32 +1 4238006..4239640 - 544 196158729 - MADE_03934 - amidase 3905 41.74 0 4239781..4240470 - 229 196158730 - MADE_03935 - ABC-type amino acid transport/signal transduction system 3906 48.24 0 4240756..4241634 + 292 196158731 - MADE_03936 - methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) 3907 48.15 0 4241983..4242981 + 332 196158732 - MADE_03937 - tRNA-dihydrouridine synthase B 3908 46.26 0 4243012..4243305 + 97 196158733 - MADE_03938 - Factor for inversion stimulation Fis, transcriptional activator 3909 48.34 +1 4243388..4244986 + 532 196158734 - MADE_03939 - bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3910 46.67 0 4245233..4246087 + 284 196158735 - MADE_03940 - predicted O-methyltransferase 3911 51.82 +2 4246115..4247407 + 430 196158736 - MADE_03941 - Phosphoribosylamine-glycine ligase 3912 46.48 0 4247865..4248617 + 250 196158737 - MADE_03942 - uncharacterized FlgJ-related protein 3913 46.19 0 4248788..4249549 - 253 196158738 - MADE_03943 - hypothetical protein 3914 48.08 0 4249707..4250642 + 311 196158739 - MADE_03944 - putative potassium channel protein 3915 46.69 0 4250753..4251658 + 301 196158740 - MADE_03945 - phosphoribulokinase 3916 47.27 0 4251797..4252915 + 372 196158741 - MADE_03946 - hypothetical protein 3917 50.35 +1 4253129..4253851 + 240 196158742 - MADE_03947 - osmolarity response regulator 3918 45.32 0 4253950..4255284 + 444 196158743 - MADE_03948 - osmolarity sensor protein 3919 45.55 0 4255319..4256497 - 392 196158744 - MADE_03949 - osmolarity sensor protein 3920 48.01 0 4256596..4259061 - 821 196158745 - MADE_03950 - glycosyl hydrolase, family 31 3921 47.60 0 4259305..4260867 - 520 196158746 - MADE_03951 - phosphoenolpyruvate carboxykinase 3922 30.89 -2 4261073..4261195 + 40 196158747 - MADE_03952 - hypothetical protein 3923 45.44 0 4261357..4262256 - 299 196158748 - MADE_03953 - Hsp33-like chaperonin 3924 46.17 0 4262280..4262684 - 134 196158749 - MADE_03954 - heat shock protein 15 3925 46.32 0 4262814..4263737 + 307 196158750 - MADE_03955 - general secretion pathway protein C 3926 46.77 0 4263837..4265882 + 681 196158751 - MADE_03956 - general secretion pathway protein D 3927 49.36 +1 4265884..4267443 + 519 196158752 - MADE_03957 - Type II secretory pathway, ATPase PulE-like protein 3928 47.27 0 4267444..4268670 + 408 196158753 - MADE_03958 - general secretion pathway protein F 3929 47.03 0 4268670..4269107 + 145 196158754 - MADE_03959 - general secretion pathway protein G 3930 47.53 0 4269113..4269739 + 208 196158755 - MADE_03960 - putative general secretion pathway protein H precursor 3931 50.62 +1 4269736..4270215 + 159 196158756 - MADE_03961 - general secretion pathway protein I 3932 47.05 0 4270217..4270843 + 208 196158757 - MADE_03962 - general secretion pathway protein J 3933 46.24 0 4270840..4271916 + 358 196158758 - MADE_03963 - putative general secretion pathway protein 3934 48.83 +1 4271916..4273115 + 399 196158759 - MADE_03964 - general secretion pathway protein L 3935 47.29 0 4273112..4273591 + 159 196158760 - MADE_03965 - general secretion pathway protein M 3936 46.54 0 4273588..4274352 + 254 196158761 - MADE_03966 - putative general secretion pathway protein N 3937 45.89 0 4274444..4275877 + 477 196158762 - MADE_03967 - hypothetical protein 3938 45.86 0 4276020..4277408 - 462 196158763 - MADE_03968 - succinate-semialdehyde dehydrogenase 3939 48.97 +1 4277739..4278320 - 193 196158764 - MADE_03969 - hypothetical protein 3940 45.74 0 4278298..4278966 - 222 196158765 - MADE_03970 - HAD-superfamily hydrolase, subfamily IA, variant 3 family protein 3941 47.16 0 4279083..4279646 + 187 196158766 - MADE_03971 - NTP pyrophosphohydrolase, NUDIX family protein 3942 46.69 0 4279649..4280494 + 281 196158767 - MADE_03972 - 3-Phosphoadenosine 5-phosphosulfate (PAPS) 3-phosphatase 3943 44.79 0 4280622..4281206 + 194 196158768 - MADE_03973 - YceI family protein 3944 48.57 +1 4281353..4283347 - 664 196158769 - MADE_03974 - putative glucosyltransferase for synthesis of periplasmic glucans 3945 46.69 0 4283328..4284959 - 543 196158770 - MADE_03975 - periplasmic glucans biosynthesis protein 3946 45.05 0 4285711..4286265 + 184 196158771 - MADE_03976 - outer membrane protein, porin family 3947 45.73 0 4286320..4286553 - 77 196158772 - MADE_03977 - hypothetical protein 3948 46.28 0 4286604..4287638 - 344 196158773 - MADE_03978 - alpha/beta hydrolase fold 3949 47.42 0 4287658..4288161 - 167 196158774 - MADE_03979 - hypothetical protein 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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