version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3801 37.78 -2 4129471..4129560 + 29 196158626 - MADE_03831 - hypothetical protein 3802 43.69 0 4129806..4130249 + 147 196158627 - MADE_03832 - hypothetical protein 3803 44.97 0 4130518..4131342 + 274 196158628 - MADE_03833 - putative transcriptional regulator, LysR family protein 3804 45.38 0 4131469..4132863 - 464 196158629 - MADE_03834 - Long-chain fatty acid transport protein 3805 46.75 0 4133216..4134214 + 332 196158630 - MADE_03835 - predicted NADP-dependent oxidoreductase 3806 45.45 0 4134293..4135357 - 354 196158631 - MADE_03836 - diguanylate cyclase 3807 44.87 0 4135430..4137301 - 623 196158632 - MADE_03837 - Signal transduction histidine kinase 3808 43.92 0 4137375..4138262 - 295 196158633 - MADE_03838 - ABC transporter substrate binding protein 3809 49.34 +1 4138521..4139507 - 328 196158634 - MADE_03839 - flavin dependent oxidoreductase 3810 40.91 -1 4139619..4139750 + 43 196158635 - MADE_03840 - hypothetical protein 3811 42.39 0 4140064..4140582 - 172 196158636 - MADE_03841 - CBS domain pair, putative 3812 46.30 0 4140601..4140816 - 71 196158637 - MADE_03842 - hypothetical protein 3813 46.04 0 4140972..4141766 - 264 196158638 - MADE_03843 - Parvulin-like peptidyl-prolyl isomerase 3814 45.03 0 4141822..4142505 - 227 196158639 - MADE_03844 - respiratory nitrate reductase, gamma subunit 3815 47.91 0 4142508..4143248 - 246 196158640 - MADE_03845 - nitrate reductase molybdenum cofactor assembly chaperone 3816 47.95 0 4143248..4144561 - 437 196158641 - MADE_03846 - nitrate reductase, beta subunit 3817 49.36 +1 4144783..4148208 - 1141 196158642 - MADE_03847 - nitrate reductase, alpha subunit 3818 43.58 0 4148916..4150682 + 588 196158643 - MADE_03848 - Signal transduction histidine kinase, nitrate/nitrite-specific 3819 45.42 0 4150707..4151765 - 352 196158644 - MADE_03849 - molybdenum ABC transporter, ATP-binding protein 3820 45.19 0 4151768..4152442 - 224 196158645 - MADE_03850 - molybdenum ABC transporter, permease protein 3821 43.59 0 4152444..4153223 - 259 196158646 - MADE_03851 - molybdenum ABC transporter, periplasmic molybdate-binding protein 3822 46.07 0 4153294..4154934 - 546 196158647 - MADE_03852 - Nitrate/nitrite transporter 3823 46.48 0 4155216..4155869 + 217 196158648 - MADE_03853 - Nitrate/nitrite response regulator (CheY, HTH domain) 3824 47.65 0 4155872..4157107 + 411 196158649 - MADE_03854 - molybdopterin biosynthesis protein 3825 41.98 0 4157328..4157489 + 53 196158650 - MADE_03855 - hypothetical protein 3826 42.12 0 4157499..4157942 + 147 196158651 - MADE_03856 - hypothetical protein 3827 48.82 +1 4157920..4158384 - 154 196158652 - MADE_03857 - molybdenum cofactor biosynthesis protein E 3828 43.50 0 4158387..4158632 - 81 196158653 - MADE_03858 - molybdopterin converting factor, subunit 1 3829 45.57 0 4158629..4159102 - 157 196158654 - MADE_03859 - molybdenum cofactor biosynthesis protein C 3830 45.79 0 4159120..4159665 - 181 196158655 - MADE_03860 - molybdenum cofactor biosynthesis protein B 3831 45.79 0 4159652..4160245 - 197 196158656 - MADE_03861 - molybdopterin guanine dinucleotide synthase 3832 46.03 0 4160247..4161089 - 280 196158657 - MADE_03862 - molybdenum cofactor biosynthesis protein A 3833 43.78 0 4161471..4162667 - 398 196158658 - MADE_03863 - hypothetical protein 3834 48.03 0 4162885..4163619 + 244 196158659 - MADE_03864 - molybdopterin biosynthesis protein MoeB 3835 41.88 0 4163658..4164242 - 194 196158660 - MADE_03865 - putative lipid carrier protein 3836 43.98 0 4164293..4166095 - 600 196158661 - MADE_03866 - thiamine pyrophosphate-binding domain protein 3837 45.35 0 4166280..4167278 + 332 196158662 - MADE_03867 - putative protease 3838 44.07 0 4167325..4168218 + 297 196158663 - MADE_03868 - putative protease 3839 50.00 +1 4168428..4168571 + 47 196158664 - MADE_03869 - acyl-CoA dehydrogenase-like protein 3840 50.77 +1 4168909..4169103 + 64 196158665 - MADE_03870 - probable oxoisovalerate dehydrogenase alpha and beta subunits 3841 44.20 0 4169148..4169837 - 229 196158666 - MADE_03871 - regulator of cell morphogenesis and NO signaling 3842 46.88 0 4169988..4171508 + 506 196158667 - MADE_03872 - anaerobic nitric oxide reductase transcription regulator 3843 41.00 -1 4171559..4171897 + 112 196158668 - MADE_03873 - Invasion gene expression up-regulator, SirB 3844 45.80 0 4171904..4173106 - 400 196158669 - MADE_03874 - Heme/copper membrane protein 3845 45.68 0 4173112..4174407 - 431 196158670 - MADE_03875 - Nitrate/nitrite transporter 3846 39.58 -1 4174359..4174502 + 47 196158671 - MADE_03876 - hypothetical protein 3847 44.10 0 4174862..4176328 + 488 196158672 - MADE_03877 - Nitrate transporter 3848 44.69 0 4176396..4178156 + 586 196158673 - MADE_03878 - Serine/threonine protein kinase 3849 41.72 0 4178162..4178602 + 146 196158674 - MADE_03879 - Hemerythrin HHE cation binding domain protein 3850 47.97 0 4179096..4179464 + 122 196158675 - MADE_03880 - ABC transporter ATPase 3851 40.71 -1 4179806..4180198 - 130 196158676 - MADE_03881 - hypothetical protein 3852 42.99 0 4180318..4182108 - 596 196158677 - MADE_03882 - anaerobic ribonucleoside triphosphate reductase 3853 43.62 0 4182092..4182538 - 148 196158678 - MADE_03883 - Radical enzyme activating protein 3854 48.83 +1 4182934..4184766 - 610 196158679 - MADE_03884 - Glucosamine-fructose-6-phosphate aminotransferase 3855 49.01 +1 4184769..4185578 - 269 196158680 - MADE_03885 - transcriptional regulator, DeoR family protein 3856 36.36 -2 4185565..4185696 + 43 196158681 - MADE_03886 - hypothetical protein 3857 45.63 0 4185744..4186784 - 346 196158682 - MADE_03887 - YvaA 3858 46.65 0 4187011..4188369 - 452 196158683 - MADE_03888 - bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase 3859 43.80 0 4188637..4190022 + 461 196158684 - MADE_03889 - diguanylate cyclase 3860 49.60 +1 4190026..4190910 - 294 196158685 - MADE_03890 - probable transmembrane protein 3861 46.87 0 4190918..4191412 - 164 196158686 - MADE_03891 - Methylated DNA-protein cysteine methyltransferase 3862 48.04 0 4191414..4192841 - 475 196158687 - MADE_03892 - ada regulatory protein 3863 45.97 0 4193120..4194211 + 363 196158688 - MADE_03893 - putative beta-lactamase 3864 45.10 0 4194252..4196171 - 639 196158689 - MADE_03894 - arginine decarboxylase 3865 42.19 0 4196321..4196749 - 142 196158690 - MADE_03895 - arginine decarboxylase 3866 48.37 +1 4196949..4198298 - 449 196158691 - MADE_03896 - NAD(P) transhydrogenase subunit beta 3867 46.45 0 4198349..4198630 - 93 196158692 - MADE_03897 - probable NAD(P) transhydrogenase subunit alpha 3868 46.98 0 4198633..4199790 - 385 196158693 - MADE_03898 - NAD(P) transhydrogenase subunit alpha 3869 47.72 0 4200363..4203239 + 958 196158694 - MADE_03899 - TonB-dependent receptor 3870 47.99 0 4203324..4204892 + 522 196158695 - MADE_03900 - putative tryptophan halogenase 3871 45.58 0 4204929..4205663 + 244 196158696 - MADE_03901 - SapC related protein 3872 46.58 0 4205642..4206343 + 233 196158697 - MADE_03902 - hypothetical protein 3873 47.78 0 4206562..4209786 - 1074 196158698 - MADE_03903 - TonB-dependent receptor 3874 46.70 0 4209939..4210529 + 196 196158699 - MADE_03904 - putative RNA polymerase sigma-70 factor FecI 3875 45.80 0 4210522..4211628 + 368 196158700 - MADE_03905 - putative regulatory protein 3876 46.59 0 4211805..4212551 + 248 196158701 - MADE_03906 - hypothetical protein 3877 45.67 0 4212660..4212959 - 99 196158702 - MADE_03907 - peptidyl-prolyl cis-trans isomerase C 3878 47.05 0 4213025..4213921 - 298 196158703 - MADE_03908 - protoheme IX farnesyltransferase (Heme O synthase) 3879 41.13 -1 4214119..4214490 - 123 196158704 - MADE_03909 - cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D) 3880 46.76 0 4214490..4215107 - 205 196158705 - MADE_03910 - cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C) 3881 46.91 0 4215104..4217092 - 662 196158706 - MADE_03911 - Ubiquinol oxidase polypeptide I 3882 45.33 0 4217095..4218036 - 313 196158707 - MADE_03912 - Ubiquinol oxidase polypeptide II (Cytochrome o subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome o ubiquinol oxidase subunit 3883 45.10 0 4218186..4218593 - 135 196158708 - MADE_03913 - hypothetical protein 3884 36.98 -2 4219137..4219328 + 63 196158709 - MADE_03914 - SpoVT/AbrB-like protein 3885 42.16 0 4219417..4219722 + 101 196158710 - MADE_03915 - predicted nucleic acid-binding protein,contains PIN domain 3886 41.23 -1 4220342..4221151 - 269 196158711 - MADE_03916 - hypothetical protein 3887 40.05 -1 4221554..4222282 + 242 196158712 - MADE_03917 - hypothetical protein 3888 47.17 0 4222663..4224303 - 546 196158713 - MADE_03918 - Chaperonin GroEL (HSP60 family) protein 3889 46.74 0 4224344..4224634 - 96 196158714 - MADE_03919 - co-chaperonin GroES 3890 47.30 0 4224925..4225461 - 178 196158715 - MADE_03920 - fxsA protein 3891 42.22 0 4225675..4225989 + 104 196158716 - MADE_03922 - periplasmic divalent cation tolerance protein 3892 47.94 0 4226013..4227908 + 631 196158717 - MADE_03921 - thiol:disulfide interchange protein precursor 3893 48.30 0 4227910..4228791 + 293 196158718 - MADE_03923 - peptidase M23B 3894 48.98 +1 4229010..4229450 + 146 196158719 - MADE_03924 - 3-dehydroquinate dehydratase (3-dehydroquinase) (Type II DHQase) 3895 48.27 0 4229465..4229926 + 153 196158720 - MADE_03925 - acetyl-CoA carboxylase 3896 48.66 +1 4229941..4231284 + 447 196158721 - MADE_03926 - acetyl-CoA carboxylase 3897 46.01 0 4231824..4232762 + 312 196158722 - MADE_03927 - hypothetical protein 3898 44.44 0 4233001..4233441 + 146 196158723 - MADE_03928 - hypothetical protein 3899 43.51 0 4233512..4233796 - 94 196158724 - MADE_03929 - hypothetical protein 3900 45.67 0 4233871..4236018 - 715 196158725 - MADE_03930 - DNA polymerase III, epsilon subunit 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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