version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3769 46.98 0 4098825..4100399 + 524 196158594 - MADE_03799 - MFS transporter 3770 47.90 0 4100389..4102056 - 555 196158595 - MADE_03800 - MdlB protein 3771 46.68 0 4102049..4103749 - 566 196158596 - MADE_03801 - ABC transporter ATP-binding protein 3772 43.86 0 4104034..4104147 - 37 196158597 - MADE_03802 - cyd operon protein YbgTEB3 3773 46.35 0 4104158..4105294 - 378 196158598 - MADE_03803 - Cytochrome D ubiquinol oxidase subunit II (Cytochrome BD-I oxidase subunit II) 3774 44.97 0 4105291..4106871 - 526 196158599 - MADE_03804 - putative cytochrome d ubiquinol oxidase, subunit I 3775 49.25 +1 4107242..4107844 - 200 196158600 - MADE_03805 - cytochrome c family protein, putative 3776 46.33 0 4107996..4109318 + 440 196158601 - MADE_03806 - sigma-54 dependent transcriptional regulator 3777 51.22 +1 4109423..4109791 + 122 196158602 - MADE_03807 - hypothetical protein 3778 46.41 0 4109862..4111979 + 705 196158603 - MADE_03808 - TonB-dependent receptor 3779 47.99 0 4112063..4112833 - 256 196158604 - MADE_03809 - putative orphan protein 3780 35.96 -2 4112859..4113125 + 88 196158605 - MADE_03810 - hypothetical protein 3781 46.67 0 4113339..4113458 - 39 196158606 - MADE_03811 - hypothetical protein 3782 47.79 0 4113446..4113853 + 135 196158607 - MADE_03812 - Ketosteroid isomerase like protein 3783 48.25 0 4114067..4114864 + 265 196158608 - MADE_03813 - acid phosphatase 3784 41.26 -1 4115166..4115594 + 142 196158609 - MADE_03814 - diguanylate cyclase 3785 47.26 0 4116320..4117540 + 406 196158610 - MADE_03815 - putative mfs transporter 3786 47.42 0 4117911..4118684 + 257 196158611 - MADE_03816 - putative siderophore utilization protein 3787 40.10 -1 4118879..4119070 + 63 196158612 - MADE_03817 - protein YjbJ 3788 45.19 0 4119271..4119405 - 44 196158613 - MADE_03818 - hypothetical protein 3789 48.95 +1 4119762..4120478 - 238 196158614 - MADE_03819 - hypothetical protein 3790 44.04 0 4120604..4121257 - 217 196158615 - MADE_03820 - hypothetical protein 3791 42.69 0 4121408..4121824 - 138 196158616 - MADE_03821 - hypothetical protein 3792 45.61 0 4121850..4121963 - 37 196158617 - MADE_03822 - hypothetical protein 3793 46.95 0 4121969..4122901 + 310 196158618 - MADE_03823 - Alpha/beta hydrolase fold protein 3794 42.14 0 4122919..4123554 - 211 196158619 - MADE_03824 - hypothetical protein 3795 44.86 0 4123595..4124158 - 187 196158620 - MADE_03825 - CBS domain protein 3796 35.71 -2 4124472..4124597 + 41 196158621 - MADE_03826 - hypothetical protein 3797 44.21 0 4124758..4125327 + 189 196158622 - MADE_03827 - putative cytochrome b561 3798 43.74 0 4125351..4125917 + 188 196158623 - MADE_03828 - YceI 3799 46.87 0 4125984..4127276 - 430 196158624 - MADE_03829 - Respiratory NADH dehydrogenase II 3800 46.75 0 4127457..4129469 - 670 196158625 - MADE_03830 - putative TonB-dependent receptor protein 3801 37.78 -2 4129471..4129560 + 29 196158626 - MADE_03831 - hypothetical protein 3802 43.69 0 4129806..4130249 + 147 196158627 - MADE_03832 - hypothetical protein 3803 44.97 0 4130518..4131342 + 274 196158628 - MADE_03833 - putative transcriptional regulator, LysR family protein 3804 45.38 0 4131469..4132863 - 464 196158629 - MADE_03834 - Long-chain fatty acid transport protein 3805 46.75 0 4133216..4134214 + 332 196158630 - MADE_03835 - predicted NADP-dependent oxidoreductase 3806 45.45 0 4134293..4135357 - 354 196158631 - MADE_03836 - diguanylate cyclase 3807 44.87 0 4135430..4137301 - 623 196158632 - MADE_03837 - Signal transduction histidine kinase 3808 43.92 0 4137375..4138262 - 295 196158633 - MADE_03838 - ABC transporter substrate binding protein 3809 49.34 +1 4138521..4139507 - 328 196158634 - MADE_03839 - flavin dependent oxidoreductase 3810 40.91 -1 4139619..4139750 + 43 196158635 - MADE_03840 - hypothetical protein 3811 42.39 0 4140064..4140582 - 172 196158636 - MADE_03841 - CBS domain pair, putative 3812 46.30 0 4140601..4140816 - 71 196158637 - MADE_03842 - hypothetical protein 3813 46.04 0 4140972..4141766 - 264 196158638 - MADE_03843 - Parvulin-like peptidyl-prolyl isomerase 3814 45.03 0 4141822..4142505 - 227 196158639 - MADE_03844 - respiratory nitrate reductase, gamma subunit 3815 47.91 0 4142508..4143248 - 246 196158640 - MADE_03845 - nitrate reductase molybdenum cofactor assembly chaperone 3816 47.95 0 4143248..4144561 - 437 196158641 - MADE_03846 - nitrate reductase, beta subunit 3817 49.36 +1 4144783..4148208 - 1141 196158642 - MADE_03847 - nitrate reductase, alpha subunit 3818 43.58 0 4148916..4150682 + 588 196158643 - MADE_03848 - Signal transduction histidine kinase, nitrate/nitrite-specific 3819 45.42 0 4150707..4151765 - 352 196158644 - MADE_03849 - molybdenum ABC transporter, ATP-binding protein 3820 45.19 0 4151768..4152442 - 224 196158645 - MADE_03850 - molybdenum ABC transporter, permease protein 3821 43.59 0 4152444..4153223 - 259 196158646 - MADE_03851 - molybdenum ABC transporter, periplasmic molybdate-binding protein 3822 46.07 0 4153294..4154934 - 546 196158647 - MADE_03852 - Nitrate/nitrite transporter 3823 46.48 0 4155216..4155869 + 217 196158648 - MADE_03853 - Nitrate/nitrite response regulator (CheY, HTH domain) 3824 47.65 0 4155872..4157107 + 411 196158649 - MADE_03854 - molybdopterin biosynthesis protein 3825 41.98 0 4157328..4157489 + 53 196158650 - MADE_03855 - hypothetical protein 3826 42.12 0 4157499..4157942 + 147 196158651 - MADE_03856 - hypothetical protein 3827 48.82 +1 4157920..4158384 - 154 196158652 - MADE_03857 - molybdenum cofactor biosynthesis protein E 3828 43.50 0 4158387..4158632 - 81 196158653 - MADE_03858 - molybdopterin converting factor, subunit 1 3829 45.57 0 4158629..4159102 - 157 196158654 - MADE_03859 - molybdenum cofactor biosynthesis protein C 3830 45.79 0 4159120..4159665 - 181 196158655 - MADE_03860 - molybdenum cofactor biosynthesis protein B 3831 45.79 0 4159652..4160245 - 197 196158656 - MADE_03861 - molybdopterin guanine dinucleotide synthase 3832 46.03 0 4160247..4161089 - 280 196158657 - MADE_03862 - molybdenum cofactor biosynthesis protein A 3833 43.78 0 4161471..4162667 - 398 196158658 - MADE_03863 - hypothetical protein 3834 48.03 0 4162885..4163619 + 244 196158659 - MADE_03864 - molybdopterin biosynthesis protein MoeB 3835 41.88 0 4163658..4164242 - 194 196158660 - MADE_03865 - putative lipid carrier protein 3836 43.98 0 4164293..4166095 - 600 196158661 - MADE_03866 - thiamine pyrophosphate-binding domain protein 3837 45.35 0 4166280..4167278 + 332 196158662 - MADE_03867 - putative protease 3838 44.07 0 4167325..4168218 + 297 196158663 - MADE_03868 - putative protease 3839 50.00 +1 4168428..4168571 + 47 196158664 - MADE_03869 - acyl-CoA dehydrogenase-like protein 3840 50.77 +1 4168909..4169103 + 64 196158665 - MADE_03870 - probable oxoisovalerate dehydrogenase alpha and beta subunits 3841 44.20 0 4169148..4169837 - 229 196158666 - MADE_03871 - regulator of cell morphogenesis and NO signaling 3842 46.88 0 4169988..4171508 + 506 196158667 - MADE_03872 - anaerobic nitric oxide reductase transcription regulator 3843 41.00 -1 4171559..4171897 + 112 196158668 - MADE_03873 - Invasion gene expression up-regulator, SirB 3844 45.80 0 4171904..4173106 - 400 196158669 - MADE_03874 - Heme/copper membrane protein 3845 45.68 0 4173112..4174407 - 431 196158670 - MADE_03875 - Nitrate/nitrite transporter 3846 39.58 -1 4174359..4174502 + 47 196158671 - MADE_03876 - hypothetical protein 3847 44.10 0 4174862..4176328 + 488 196158672 - MADE_03877 - Nitrate transporter 3848 44.69 0 4176396..4178156 + 586 196158673 - MADE_03878 - Serine/threonine protein kinase 3849 41.72 0 4178162..4178602 + 146 196158674 - MADE_03879 - Hemerythrin HHE cation binding domain protein 3850 47.97 0 4179096..4179464 + 122 196158675 - MADE_03880 - ABC transporter ATPase 3851 40.71 -1 4179806..4180198 - 130 196158676 - MADE_03881 - hypothetical protein 3852 42.99 0 4180318..4182108 - 596 196158677 - MADE_03882 - anaerobic ribonucleoside triphosphate reductase 3853 43.62 0 4182092..4182538 - 148 196158678 - MADE_03883 - Radical enzyme activating protein 3854 48.83 +1 4182934..4184766 - 610 196158679 - MADE_03884 - Glucosamine-fructose-6-phosphate aminotransferase 3855 49.01 +1 4184769..4185578 - 269 196158680 - MADE_03885 - transcriptional regulator, DeoR family protein 3856 36.36 -2 4185565..4185696 + 43 196158681 - MADE_03886 - hypothetical protein 3857 45.63 0 4185744..4186784 - 346 196158682 - MADE_03887 - YvaA 3858 46.65 0 4187011..4188369 - 452 196158683 - MADE_03888 - bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase 3859 43.80 0 4188637..4190022 + 461 196158684 - MADE_03889 - diguanylate cyclase 3860 49.60 +1 4190026..4190910 - 294 196158685 - MADE_03890 - probable transmembrane protein 3861 46.87 0 4190918..4191412 - 164 196158686 - MADE_03891 - Methylated DNA-protein cysteine methyltransferase 3862 48.04 0 4191414..4192841 - 475 196158687 - MADE_03892 - ada regulatory protein 3863 45.97 0 4193120..4194211 + 363 196158688 - MADE_03893 - putative beta-lactamase 3864 45.10 0 4194252..4196171 - 639 196158689 - MADE_03894 - arginine decarboxylase 3865 42.19 0 4196321..4196749 - 142 196158690 - MADE_03895 - arginine decarboxylase 3866 48.37 +1 4196949..4198298 - 449 196158691 - MADE_03896 - NAD(P) transhydrogenase subunit beta 3867 46.45 0 4198349..4198630 - 93 196158692 - MADE_03897 - probable NAD(P) transhydrogenase subunit alpha 3868 46.98 0 4198633..4199790 - 385 196158693 - MADE_03898 - NAD(P) transhydrogenase subunit alpha 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0