version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3742 45.51 0 4063438..4064406 - 322 196158567 - MADE_03770 - hypothetical protein 3743 47.17 0 4064465..4064977 - 170 196158568 - MADE_03771 - putative orphan protein 3744 44.93 0 4064970..4065581 - 203 196158569 - MADE_03772 - putative RNA polymerase sigma factor 3745 47.75 0 4065658..4066302 + 214 196158570 - MADE_03773 - MOSC domain containing protein 3746 40.26 -1 4066289..4066591 - 100 196158571 - MADE_03774 - hypothetical protein 3747 45.30 0 4066816..4067868 - 350 196158572 - MADE_03775 - putative hydrolase 3748 46.14 0 4068219..4068671 - 150 196158573 - MADE_03776 - 50S ribosomal subunit protein L9 3749 44.74 0 4068698..4068925 - 75 196158574 - MADE_03777 - 30S ribosomal protein S18 3750 46.27 0 4068937..4069338 - 133 196158575 - MADE_03778 - 30S ribosomal protein S6 3751 42.34 0 4069480..4070712 - 410 196158576 - MADE_03779 - GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal 3752 40.97 -1 4070962..4071249 + 95 196158577 - MADE_03780 - YebG family protein 3753 44.31 0 4071446..4072210 + 254 196158578 - MADE_03781 - ABC transporter, ATP-binding protein 3754 43.92 0 4072210..4073550 + 446 196158579 - MADE_03782 - putative permease 3755 47.41 0 4073574..4075157 - 527 196158580 - MADE_03783 - Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins) 3756 42.50 0 4075313..4076818 - 501 196158581 - MADE_03784 - sensor histidine kinase 3757 45.43 0 4076898..4077980 - 360 196158582 - MADE_03785 - methyl-accepting chemotaxis protein 3758 44.75 0 4078276..4079028 + 250 196158583 - MADE_03786 - putative integral membrane protein 3759 43.51 0 4079075..4080037 - 320 196158584 - MADE_03787 - Co/Zn/Cd efflux system component 3760 48.25 0 4083178..4086126 + 982 196158585 - MADE_03790 - TonB-dependent receptor 3761 49.85 +1 4086170..4087483 + 437 196158586 - MADE_03791 - glycosyl hydrolase, family 16 3762 48.25 0 4087551..4090499 + 982 196158587 - MADE_03792 - TonB-dependent receptor 3763 47.58 0 4090676..4092163 - 495 196158588 - MADE_03793 - Na+/H+ antiporter, NhaC family protein 3764 47.40 0 4092409..4094961 - 850 196158589 - MADE_03794 - glucan 1,4-beta-glucosidase 3765 46.16 0 4094974..4096236 - 420 196158590 - MADE_03795 - glucose/galactose transporter family protein 3766 25.83 -2 4096268..4096387 + 39 196158591 - MADE_03796 - hypothetical protein 3767 45.25 0 4096443..4097801 + 452 196158592 - MADE_03797 - beta-glucosidase 3768 46.41 0 4097822..4098823 + 333 196158593 - MADE_03798 - galactose operon repressor 3769 46.98 0 4098825..4100399 + 524 196158594 - MADE_03799 - MFS transporter 3770 47.90 0 4100389..4102056 - 555 196158595 - MADE_03800 - MdlB protein 3771 46.68 0 4102049..4103749 - 566 196158596 - MADE_03801 - ABC transporter ATP-binding protein 3772 43.86 0 4104034..4104147 - 37 196158597 - MADE_03802 - cyd operon protein YbgTEB3 3773 46.35 0 4104158..4105294 - 378 196158598 - MADE_03803 - Cytochrome D ubiquinol oxidase subunit II (Cytochrome BD-I oxidase subunit II) 3774 44.97 0 4105291..4106871 - 526 196158599 - MADE_03804 - putative cytochrome d ubiquinol oxidase, subunit I 3775 49.25 +1 4107242..4107844 - 200 196158600 - MADE_03805 - cytochrome c family protein, putative 3776 46.33 0 4107996..4109318 + 440 196158601 - MADE_03806 - sigma-54 dependent transcriptional regulator 3777 51.22 +1 4109423..4109791 + 122 196158602 - MADE_03807 - hypothetical protein 3778 46.41 0 4109862..4111979 + 705 196158603 - MADE_03808 - TonB-dependent receptor 3779 47.99 0 4112063..4112833 - 256 196158604 - MADE_03809 - putative orphan protein 3780 35.96 -2 4112859..4113125 + 88 196158605 - MADE_03810 - hypothetical protein 3781 46.67 0 4113339..4113458 - 39 196158606 - MADE_03811 - hypothetical protein 3782 47.79 0 4113446..4113853 + 135 196158607 - MADE_03812 - Ketosteroid isomerase like protein 3783 48.25 0 4114067..4114864 + 265 196158608 - MADE_03813 - acid phosphatase 3784 41.26 -1 4115166..4115594 + 142 196158609 - MADE_03814 - diguanylate cyclase 3785 47.26 0 4116320..4117540 + 406 196158610 - MADE_03815 - putative mfs transporter 3786 47.42 0 4117911..4118684 + 257 196158611 - MADE_03816 - putative siderophore utilization protein 3787 40.10 -1 4118879..4119070 + 63 196158612 - MADE_03817 - protein YjbJ 3788 45.19 0 4119271..4119405 - 44 196158613 - MADE_03818 - hypothetical protein 3789 48.95 +1 4119762..4120478 - 238 196158614 - MADE_03819 - hypothetical protein 3790 44.04 0 4120604..4121257 - 217 196158615 - MADE_03820 - hypothetical protein 3791 42.69 0 4121408..4121824 - 138 196158616 - MADE_03821 - hypothetical protein 3792 45.61 0 4121850..4121963 - 37 196158617 - MADE_03822 - hypothetical protein 3793 46.95 0 4121969..4122901 + 310 196158618 - MADE_03823 - Alpha/beta hydrolase fold protein 3794 42.14 0 4122919..4123554 - 211 196158619 - MADE_03824 - hypothetical protein 3795 44.86 0 4123595..4124158 - 187 196158620 - MADE_03825 - CBS domain protein 3796 35.71 -2 4124472..4124597 + 41 196158621 - MADE_03826 - hypothetical protein 3797 44.21 0 4124758..4125327 + 189 196158622 - MADE_03827 - putative cytochrome b561 3798 43.74 0 4125351..4125917 + 188 196158623 - MADE_03828 - YceI 3799 46.87 0 4125984..4127276 - 430 196158624 - MADE_03829 - Respiratory NADH dehydrogenase II 3800 46.75 0 4127457..4129469 - 670 196158625 - MADE_03830 - putative TonB-dependent receptor protein 3801 37.78 -2 4129471..4129560 + 29 196158626 - MADE_03831 - hypothetical protein 3802 43.69 0 4129806..4130249 + 147 196158627 - MADE_03832 - hypothetical protein 3803 44.97 0 4130518..4131342 + 274 196158628 - MADE_03833 - putative transcriptional regulator, LysR family protein 3804 45.38 0 4131469..4132863 - 464 196158629 - MADE_03834 - Long-chain fatty acid transport protein 3805 46.75 0 4133216..4134214 + 332 196158630 - MADE_03835 - predicted NADP-dependent oxidoreductase 3806 45.45 0 4134293..4135357 - 354 196158631 - MADE_03836 - diguanylate cyclase 3807 44.87 0 4135430..4137301 - 623 196158632 - MADE_03837 - Signal transduction histidine kinase 3808 43.92 0 4137375..4138262 - 295 196158633 - MADE_03838 - ABC transporter substrate binding protein 3809 49.34 +1 4138521..4139507 - 328 196158634 - MADE_03839 - flavin dependent oxidoreductase 3810 40.91 -1 4139619..4139750 + 43 196158635 - MADE_03840 - hypothetical protein 3811 42.39 0 4140064..4140582 - 172 196158636 - MADE_03841 - CBS domain pair, putative 3812 46.30 0 4140601..4140816 - 71 196158637 - MADE_03842 - hypothetical protein 3813 46.04 0 4140972..4141766 - 264 196158638 - MADE_03843 - Parvulin-like peptidyl-prolyl isomerase 3814 45.03 0 4141822..4142505 - 227 196158639 - MADE_03844 - respiratory nitrate reductase, gamma subunit 3815 47.91 0 4142508..4143248 - 246 196158640 - MADE_03845 - nitrate reductase molybdenum cofactor assembly chaperone 3816 47.95 0 4143248..4144561 - 437 196158641 - MADE_03846 - nitrate reductase, beta subunit 3817 49.36 +1 4144783..4148208 - 1141 196158642 - MADE_03847 - nitrate reductase, alpha subunit 3818 43.58 0 4148916..4150682 + 588 196158643 - MADE_03848 - Signal transduction histidine kinase, nitrate/nitrite-specific 3819 45.42 0 4150707..4151765 - 352 196158644 - MADE_03849 - molybdenum ABC transporter, ATP-binding protein 3820 45.19 0 4151768..4152442 - 224 196158645 - MADE_03850 - molybdenum ABC transporter, permease protein 3821 43.59 0 4152444..4153223 - 259 196158646 - MADE_03851 - molybdenum ABC transporter, periplasmic molybdate-binding protein 3822 46.07 0 4153294..4154934 - 546 196158647 - MADE_03852 - Nitrate/nitrite transporter 3823 46.48 0 4155216..4155869 + 217 196158648 - MADE_03853 - Nitrate/nitrite response regulator (CheY, HTH domain) 3824 47.65 0 4155872..4157107 + 411 196158649 - MADE_03854 - molybdopterin biosynthesis protein 3825 41.98 0 4157328..4157489 + 53 196158650 - MADE_03855 - hypothetical protein 3826 42.12 0 4157499..4157942 + 147 196158651 - MADE_03856 - hypothetical protein 3827 48.82 +1 4157920..4158384 - 154 196158652 - MADE_03857 - molybdenum cofactor biosynthesis protein E 3828 43.50 0 4158387..4158632 - 81 196158653 - MADE_03858 - molybdopterin converting factor, subunit 1 3829 45.57 0 4158629..4159102 - 157 196158654 - MADE_03859 - molybdenum cofactor biosynthesis protein C 3830 45.79 0 4159120..4159665 - 181 196158655 - MADE_03860 - molybdenum cofactor biosynthesis protein B 3831 45.79 0 4159652..4160245 - 197 196158656 - MADE_03861 - molybdopterin guanine dinucleotide synthase 3832 46.03 0 4160247..4161089 - 280 196158657 - MADE_03862 - molybdenum cofactor biosynthesis protein A 3833 43.78 0 4161471..4162667 - 398 196158658 - MADE_03863 - hypothetical protein 3834 48.03 0 4162885..4163619 + 244 196158659 - MADE_03864 - molybdopterin biosynthesis protein MoeB 3835 41.88 0 4163658..4164242 - 194 196158660 - MADE_03865 - putative lipid carrier protein 3836 43.98 0 4164293..4166095 - 600 196158661 - MADE_03866 - thiamine pyrophosphate-binding domain protein 3837 45.35 0 4166280..4167278 + 332 196158662 - MADE_03867 - putative protease 3838 44.07 0 4167325..4168218 + 297 196158663 - MADE_03868 - putative protease 3839 50.00 +1 4168428..4168571 + 47 196158664 - MADE_03869 - acyl-CoA dehydrogenase-like protein 3840 50.77 +1 4168909..4169103 + 64 196158665 - MADE_03870 - probable oxoisovalerate dehydrogenase alpha and beta subunits 3841 44.20 0 4169148..4169837 - 229 196158666 - MADE_03871 - regulator of cell morphogenesis and NO signaling 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0