version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 315 45.80 0 345394..345738 + 114 196155140 - MADE_00317 - transcriptional regulator, MerR family protein 316 45.13 0 345738..347102 + 454 196155141 - MADE_00318 - putative cation efflux protein 317 45.42 0 347099..349117 + 672 196155142 - MADE_00319 - putative cation efflux system protein 318 46.21 0 349114..352251 + 1045 196155143 - MADE_00320 - cation efflux system protein CusA 319 41.09 -1 352369..352497 + 42 196155144 - MADE_00321 - hypothetical protein 320 40.74 -1 352562..352696 - 44 196155145 - MADE_00322 - hypothetical protein 321 43.86 0 352788..352901 + 37 196155146 - MADE_00323 - hypothetical protein 322 43.28 0 352910..353824 + 304 196155147 - MADE_00324 - putative copper export protein 323 41.46 -1 353836..354315 + 159 196155148 - MADE_00325 - putative orphan protein 324 41.20 -1 354350..354832 + 160 196155149 - MADE_00326 - L-asparaginase 325 40.63 -1 354847..355545 + 232 196155150 - MADE_00327 - hypothetical protein 326 44.44 0 355694..355819 + 41 196155151 - MADE_00328 - hypothetical protein 327 36.00 -2 355816..355965 - 49 196155152 - MADE_00329 - hypothetical protein 328 39.68 -1 356049..356804 - 251 196155153 - MADE_00330 - hypothetical protein 329 42.55 0 356814..357095 - 93 196155154 - MADE_00331 - hypothetical protein 330 42.78 0 357225..359342 - 705 196155155 - MADE_00332 - FAD linked oxidase, N-terminal 331 44.25 0 359776..359949 + 57 196155156 - MADE_00333 - hypothetical protein 332 46.30 0 360012..360173 + 53 196155157 - MADE_00334 - hypothetical protein 333 45.36 0 360300..360482 + 60 196155158 - MADE_00335 - nitric oxide reductase, cytochrome c-containing subunit 334 44.44 0 360579..361010 + 143 196155159 - MADE_00336 - hypothetical protein 335 42.32 0 361173..361439 + 88 196155160 - MADE_00337 - hypothetical protein 336 43.47 0 361513..362301 + 262 196155161 - MADE_00338 - putative exported protein of unknown function 337 46.67 0 362303..362422 + 39 196155162 - MADE_00339 - hypothetical protein 338 47.50 0 362487..364244 + 585 196155163 - MADE_00340 - putative NADH oxidoreductase; putative nitric oxide dioxygenase 339 42.56 0 364244..365002 + 252 196155164 - MADE_00341 - hypothetical protein 340 45.83 0 365002..365793 + 263 196155165 - MADE_00342 - putative exported protein of unknown function with cytochrome Cfamily domain 341 44.41 0 365911..367029 + 372 196155166 - MADE_00343 - hypothetical protein 342 48.83 +1 367044..367598 + 184 196155167 - MADE_00344 - hydrogenase 2 maturation protease 343 43.45 0 367595..368029 + 144 196155168 - MADE_00345 - HupH hydrogenase expression protein 344 48.09 0 368007..369029 + 340 196155169 - MADE_00346 - Ni-Fe hydrogenase, small subunit 345 46.75 0 369047..370924 + 625 196155170 - MADE_00347 - Ni-Fe hydrogenase large chain 346 45.71 0 371176..371385 + 69 196155171 - MADE_00348 - hydrogenase assembly chaperone hypC/hupF 347 46.30 0 371441..371764 + 107 196155172 - MADE_00349 - hydrogenase expression/formation protein HypA 348 43.37 0 371754..372500 + 248 196155173 - MADE_00350 - hydrogenase accessory protein HypB 349 45.50 0 372507..373640 + 377 196155174 - MADE_00351 - Hydrogenase formation HypD protein 350 45.77 0 373640..375946 + 768 196155175 - MADE_00352 - Hydrogenase maturation protein HypF 351 46.25 0 375946..376998 + 350 196155176 - MADE_00353 - Hydrogenase expression/formation protein HypE 352 44.53 0 377117..377527 + 136 196155177 - MADE_00354 - putative Zn(II)-responsive transcriptional regulator, regulates Zn export (MerR family) protein 353 47.25 0 377552..379900 + 782 196155178 - MADE_00355 - Cation transport ATPase 354 45.76 0 379913..380266 + 117 196155179 - MADE_00356 - putative secreted protein containing plastocyanin domain 355 44.03 0 380259..380417 - 52 196155180 - MADE_00357 - hypothetical protein 356 41.98 0 380475..380636 + 53 196155181 - MADE_00358 - hypothetical protein 357 43.27 0 380626..381279 + 217 196155182 - MADE_00359 - predicted protein-S-isoprenylcysteine methyltransferase 358 43.97 0 381290..381637 + 115 196155183 - MADE_00360 - hypothetical protein 359 42.74 0 381666..382016 - 116 196155184 - MADE_00361 - hypothetical protein 360 50.06 +1 382033..383610 - 525 196155185 - MADE_00362 - transposase 361 46.13 0 383634..383969 - 111 196155186 - MADE_00363 - Transposase and inactivated derivative 362 47.72 0 383969..384253 - 94 196155187 - MADE_00364 - hypothetical protein 363 33.33 -2 384328..384456 + 42 196155188 - MADE_00365 - hypothetical protein 364 42.81 0 384569..384874 + 101 196155189 - MADE_00366 - hypothetical protein 365 37.16 -2 384950..385132 + 60 196155190 - MADE_00367 - hypothetical protein 366 42.17 0 385534..386031 - 165 196155191 - MADE_00368 - Transposase 367 33.99 -2 386409..387167 - 252 196155192 - MADE_00369 - hypothetical protein 368 40.32 -1 387228..388043 - 271 196155193 - MADE_00370 - hypothetical protein 369 38.17 -1 388105..388476 - 123 196155194 - MADE_00371 - hypothetical protein 370 42.23 0 390076..391356 + 426 196155195 - MADE_00372 - putative RND efflux system protein 371 40.88 -1 391308..392540 + 410 196155196 - MADE_00373 - HelB protein 372 43.44 0 392556..395663 + 1035 196155197 - MADE_00374 - putative RND efflux system protein 373 39.48 -1 395707..396585 + 292 196155198 - MADE_00375 - cation diffusion facilitator family transporter 374 31.77 -2 396893..397084 + 63 196155199 - MADE_00376 - hypothetical protein 375 39.90 -1 397329..397739 - 136 196155200 - MADE_00377 - putative diacylglycerol kinase (DAGK) 376 42.97 0 397727..398629 - 300 196155201 - MADE_00378 - putative sulfatase 377 51.13 +1 398718..399335 + 205 196155202 - MADE_00379 - transposase 378 51.11 +1 399362..400126 + 254 196155203 - MADE_00380 - transposase and inactivated derivative 379 37.04 -2 400142..400870 - 242 196155204 - MADE_00381 - lipid A phosphoethanolamine transferase, associated with polymyxin resistance 380 42.97 0 400991..402733 - 580 196155205 - MADE_00382 - glycosyl transferase, family 39 381 40.73 -1 402708..403424 - 238 196155206 - MADE_00383 - hypothetical protein 382 39.46 -1 403425..404159 - 244 196155207 - MADE_00384 - glycosyl transferase, group 2 family protein 383 40.62 -1 405096..405740 + 214 196155208 - MADE_00385 - transcriptional regulator 384 38.19 -1 405724..407163 + 479 196155209 - MADE_00386 - putative sensor transduction kinase (copper resistance) 385 39.88 -1 408753..409271 + 172 196155210 - MADE_00387 - putative metal-binding protein 386 38.70 -1 409352..409705 + 117 196155211 - MADE_00388 - putative copper resistance (CopC-like) protein 387 39.19 -1 409727..410614 + 295 196155212 - MADE_00389 - putative copper export protein 388 42.02 0 410680..411105 + 141 196155213 - MADE_00390 - putative orphan protein 389 37.30 -2 411353..411604 + 83 196155214 - MADE_00391 - hypothetical protein 390 36.68 -2 411863..412699 + 278 196155215 - MADE_00392 - methionyl-tRNA formyltransferase 391 36.88 -2 412806..413228 + 140 196155216 - MADE_00393 - hypothetical protein 392 41.38 -1 413494..413928 + 144 196155217 - MADE_00394 - putative Zn(II)-responsive transcriptional regulator, regulates Zn export (MerR family) protein 393 47.33 0 414004..416247 + 747 196155218 - MADE_00395 - Cation transport ATPase 394 42.56 0 416277..416612 + 111 196155219 - MADE_00396 - putative secreted protein containing plastocyanin domain 395 46.33 0 416783..416959 + 58 196155220 - MADE_00397 - hypothetical protein 396 42.50 0 416985..417617 + 210 196155221 - MADE_00398 - predicted protein-S-isoprenylcysteine methyltransferase 397 40.71 -1 417646..418011 + 121 196155222 - MADE_00399 - hypothetical protein 398 45.15 0 418164..418400 + 78 196155223 - MADE_00400 - hypothetical protein 399 46.21 0 418614..418745 + 43 196155224 - MADE_00401 - hypothetical protein 400 41.67 0 418847..419002 + 51 196155225 - MADE_00402 - hypothetical protein 401 42.31 0 419158..420483 - 441 196155226 - MADE_00403 - Amino acid permease-associated region 402 43.08 0 420641..421348 - 235 196155227 - MADE_00404 - hypothetical protein 403 46.67 0 421397..423211 - 604 196155228 - MADE_00405 - Multicopper oxidase 404 41.13 -1 423877..424581 - 234 196155229 - MADE_00406 - hypothetical protein 405 39.13 -1 424601..425014 - 137 196155230 - MADE_00407 - hypothetical protein 406 42.71 0 426300..426491 - 63 196155231 - MADE_00408 - site-specific recombinase, phage integrase family protein 407 33.33 -2 426810..426926 + 38 196155232 - MADE_00409 - hypothetical protein 408 45.49 0 427105..428289 + 394 196155233 - MADE_00410 - methyl-accepting chemotaxis protein 409 47.27 0 428346..428711 + 121 196155234 - MADE_00411 - chemotaxis protein CheY 410 47.36 0 428749..430773 + 674 196155235 - MADE_00412 - probable two-component sensor (CheA) 411 44.01 0 430770..431078 + 102 196155236 - MADE_00413 - purine-binding chemotaxis protein CheW 412 47.25 0 431167..431676 + 169 196155237 - MADE_00414 - CheD 413 47.95 0 431679..432725 + 348 196155238 - MADE_00415 - chemotaxis-specific methylesterase 414 41.38 -1 433156..433416 + 86 196155239 - MADE_00416 - hypothetical protein 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0