version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2488 46.60 0 2728113..2728994 - 293 196157313 - MADE_02512 - hypothetical protein 2489 47.13 0 2729026..2729670 - 214 196157314 - MADE_02513 - transcriptional regulator, TetR family protein 2490 38.46 -1 2729827..2729943 + 38 196157315 - MADE_02514 - hypothetical protein 2491 46.02 0 2730051..2731493 + 480 196157316 - MADE_02515 - putative xanthine dehydrogenase, XdhA subunit 2492 49.01 +1 2731486..2733852 + 788 196157317 - MADE_02516 - xanthine dehydrogenase, molybdopterin binding subunit 2493 49.68 +1 2733849..2734790 + 313 196157318 - MADE_02517 - Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family protein 2494 46.52 0 2734864..2735280 + 138 196157319 - MADE_02518 - uricase-like protein 2495 49.55 +1 2735327..2735659 + 110 196157320 - MADE_02519 - Transthyretin 2496 46.56 0 2735665..2736972 + 435 196157321 - MADE_02520 - guanine deaminase 2497 46.14 0 2737004..2738284 + 426 196157322 - MADE_02521 - predicted membrane protein 2498 42.91 0 2738305..2739588 - 427 196157323 - MADE_02522 - putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator 2499 44.17 0 2739819..2740178 - 119 196157324 - MADE_02523 - hypothetical transcriptional regulator 2500 47.11 0 2740370..2740870 + 166 196157325 - MADE_02524 - putative aldehyde dehydrogenase subunit III 2501 48.96 +1 2740867..2743164 + 765 196157326 - MADE_02525 - Membrane-bound aldehyde dehydrogenase, large subunit 2502 44.24 0 2743339..2743833 - 164 196157327 - MADE_02526 - hypothetical protein 2503 44.76 0 2744094..2744732 + 212 196157328 - MADE_02527 - putative NADPH-quinone reductase 2504 46.81 0 2744770..2746668 + 632 196157329 - MADE_02528 - glutathione-regulated potassium-efflux system protein KefC 2505 48.84 +1 2746837..2748048 + 403 196157330 - MADE_02529 - putative multidrug resistance protein (substrate binding lipoprotein) 2506 47.70 0 2748052..2751099 + 1015 196157331 - MADE_02530 - acriflavin resistance protein ei VT8 2507 44.91 0 2751431..2753365 + 644 196157332 - MADE_02531 - diguanylate cyclase/phosphodiesterase 2508 49.25 +1 2753855..2754388 + 177 196157333 - MADE_02532 - hypothetical protein 2509 43.21 0 2754348..2756069 - 573 196157334 - MADE_02533 - putative diguanylate cyclase/phosphodiesterase domain 2 (EAL) 2510 42.84 0 2756428..2757468 + 346 196157335 - MADE_02534 - transcriptional factor 2511 44.38 0 2757465..2758550 - 361 196157336 - MADE_02535 - putative cell division protein FtsZ 2512 45.13 0 2759110..2760186 - 358 196157337 - MADE_02536 - hypothetical protein 2513 48.07 0 2760346..2760759 - 137 196157338 - MADE_02537 - putative bacterial regulatory protein, MarR 2514 35.06 -2 2760761..2760934 - 57 196157339 - MADE_02538 - hypothetical protein 2515 47.55 0 2761057..2762421 + 454 196157340 - MADE_02539 - Homogentisate 1,2-dioxygenase 2516 49.18 +1 2762533..2762898 + 121 196157341 - MADE_02540 - glyoxalase family protein 2517 44.79 0 2763121..2764194 - 357 196157342 - MADE_02541 - 4-hydroxyphenylpyruvate dioxygenase 2518 49.02 +1 2764402..2764605 + 67 196157343 - MADE_02542 - hypothetical protein 2519 41.38 -1 2764790..2765137 + 115 196157344 - MADE_02543 - arsenate reductase 2520 49.43 +1 2765131..2766267 + 378 196157345 - MADE_02544 - succinyl-diaminopimelate desuccinylase 2521 47.78 0 2766283..2766981 + 232 196157346 - MADE_02545 - D-alanyl-D-alanine carboxypeptidase 2522 48.11 0 2767014..2767277 + 87 196157347 - MADE_02546 - hypothetical protein 2523 47.45 0 2767428..2768681 + 417 196157348 - MADE_02547 - proton/glutamate symporter 2524 44.65 0 2768810..2769136 - 108 196157349 - MADE_02548 - hypothetical protein 2525 44.64 0 2769195..2769530 - 111 196157350 - MADE_02549 - putative HIT family hydrolase 2526 45.50 0 2769598..2770641 - 347 196157351 - MADE_02550 - succinylglutamate desuccinylase 2527 44.69 0 2770856..2772220 - 454 196157352 - MADE_02551 - sensory box/GGDEF domain/EAL domain protein 2528 45.35 0 2772432..2774945 - 837 196157353 - MADE_02552 - putative maltodextrin phosphorylase 2529 48.03 0 2775127..2776779 - 550 196157354 - MADE_02553 - phosphoglucomutase, alpha-D-glucose phosphate-specific 2530 45.67 0 2776825..2777643 - 272 196157355 - MADE_02554 - SeqA protein 2531 48.21 0 2777923..2778870 + 315 196157356 - MADE_02555 - MoxR protein 2532 44.98 0 2778943..2780067 + 374 196157357 - MADE_02556 - hypothetical protein 2533 47.04 0 2780064..2782127 + 687 196157358 - MADE_02557 - transglutaminase family protein 2534 48.41 +1 2782722..2783570 + 282 196157359 - MADE_02558 - Formate/nitrite transporter 2535 46.20 0 2783706..2785523 + 605 196157360 - MADE_02559 - Serine/threonine protein kinase 2536 49.28 +1 2785554..2785829 + 91 196157361 - MADE_02560 - cyanate hydratase 2537 41.07 -1 2786101..2786268 + 55 196157362 - MADE_02561 - cyanate hydratase 2538 46.26 0 2786372..2788459 - 695 196157363 - MADE_02562 - elongation factor EF-2 2539 44.99 0 2788643..2789740 - 365 196157364 - MADE_02563 - methyltransferase 2540 45.77 0 2789733..2790158 - 141 196157365 - MADE_02564 - uncharacterized small membrane protein 2541 47.17 0 2790190..2790861 - 223 196157366 - MADE_02565 - predicted hydrolase of the alpha/beta-hydrolase fold 2542 48.06 0 2790873..2791775 - 300 196157367 - MADE_02566 - putative transcriptional regulator, LysR family protein 2543 41.50 0 2791986..2792279 + 97 196157368 - MADE_02567 - hypothetical protein 2544 47.49 0 2792341..2793195 - 284 196157369 - MADE_02568 - 2-dehydro-3-deoxyphosphooctonate aldolase 2545 43.48 0 2793216..2793560 - 114 196157370 - MADE_02569 - Invasion gene expression up-regulator, SirB 2546 34.19 -2 2793660..2793776 + 38 196157371 - MADE_02570 - hypothetical protein 2547 44.89 0 2793808..2795373 - 521 196157372 - MADE_02571 - response regulator 2548 47.67 0 2795524..2796381 - 285 196157373 - MADE_02572 - peptide release factor-glutamine N5-methyltransferase(HemK) 2549 48.34 +1 2796383..2797468 - 361 196157374 - MADE_02573 - peptide chain release factor 1 2550 46.86 0 2797484..2798311 - 275 196157375 - MADE_02574 - glutamyl-tRNA reductase 2551 43.84 0 2798324..2798599 + 91 196157376 - MADE_02575 - outer membrane lipoprotein LolB precursor 2552 45.86 0 2798587..2799504 + 305 196157377 - MADE_02576 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 2553 45.36 0 2799647..2800594 + 315 196157378 - MADE_02577 - ribose-phosphate pyrophosphokinase 2554 44.73 0 2800711..2800947 - 78 196157379 - MADE_02578 - hypothetical protein 2555 41.57 0 2801562..2802071 + 169 196157380 - MADE_02579 - ribose-phosphate pyrophosphokinase 2556 47.90 0 2802186..2803187 + 333 196157381 - MADE_02580 - zinc-containing alcohol dehydrogenase family protein 2557 46.45 0 2803500..2804132 + 210 196157382 - MADE_02581 - ribosomal protein L25 2558 44.50 0 2804138..2804719 + 193 196157383 - MADE_02582 - peptidyl-tRNA hydrolase 2559 44.78 0 2804762..2805853 + 363 196157384 - MADE_02583 - putative GTP-binding protein 2560 45.11 0 2805979..2806776 + 265 196157385 - MADE_02584 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 2561 40.56 -1 2806758..2807186 - 142 196157386 - MADE_02585 - polysaccharide biosynthesis protein 2562 38.79 -1 2807367..2808245 - 292 196157387 - MADE_02586 - glycosyl transferase 2563 38.04 -2 2808274..2809527 - 417 196157388 - MADE_02587 - Capsule polysaccharide biosynthesis 2564 42.79 0 2809529..2810374 - 281 196157389 - MADE_02588 - Glycosyl transferase, family 2 2565 43.81 0 2810532..2811743 - 403 196157390 - MADE_02589 - Glycosyltransferase 2566 41.54 0 2811744..2812730 - 328 196157391 - MADE_02590 - Glycosyl transferase, family 2 2567 43.03 0 2813076..2814158 + 360 196157392 - MADE_02591 - Glycosyl transferase, group 1 2568 41.80 0 2814155..2814733 + 192 196157393 - MADE_02592 - O-acetyltransferase 2569 44.51 0 2814730..2815767 + 345 196157394 - MADE_02593 - hypothetical protein 2570 43.39 0 2815721..2817202 - 493 196157395 - MADE_02594 - possible polysaccharide export protein 2571 45.95 0 2817183..2818331 - 382 196157396 - MADE_02595 - glycosyltransferase 2572 39.13 -1 2818324..2819754 - 476 196157397 - MADE_02596 - eight transmembrane protein EpsH 2573 43.54 0 2819778..2820590 - 270 196157398 - MADE_02597 - Polysaccharide deacetylase 2574 40.55 -1 2820626..2822038 - 470 196157399 - MADE_02598 - bacterial sugar transferase domain protein 2575 43.30 0 2822268..2822819 + 183 196157400 - MADE_02599 - polysaccharide biosynthesis/export protein 2576 41.47 -1 2822838..2824397 + 519 196157401 - MADE_02600 - chain length determinant family protein 2577 42.00 0 2824397..2825296 + 299 196157402 - MADE_02601 - putative exopolysaccharide biosynthesis protein 2578 40.29 -1 2825277..2827001 + 574 196157403 - MADE_02602 - hypothetical protein 2579 43.76 0 2827103..2828272 - 389 196157404 - MADE_02603 - putative general secretion pathway protein A 2580 48.78 +1 2828331..2828576 - 81 196157405 - MADE_02604 - ADP-heptose synthase 2581 46.98 0 2828679..2829440 - 253 196157406 - MADE_02605 - ADP-heptose synthase 2582 47.57 0 2829473..2829760 - 95 196157407 - MADE_02606 - ADP-heptose synthase 2583 42.30 0 2829783..2830139 + 118 196157408 - MADE_02607 - hypothetical URI domain endonuclease 2584 45.03 0 2830144..2831049 - 301 196157409 - MADE_02608 - putative ATP synthase F0, A subunit 2585 35.32 -2 2831082..2831282 + 66 196157410 - MADE_02609 - hypothetical protein 2586 45.85 0 2831341..2834313 + 990 196157411 - MADE_02610 - putative glutamate-ammonia-ligase adenylyltransferase 2587 45.95 0 2834469..2835086 - 205 196157412 - MADE_02611 - hypothetical protein 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0